RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 A0A096LNI7 61 aa14.51□□□□□ -0.09
ACTN4-210ENST00000588618 IFITM1P13164 125 aa14.49□□□□□ -0.09
ACTN4-210ENST00000588618 SOSTDC1Q6X4U4 206 aa14.49□□□□□ -0.09
ACTN4-210ENST00000588618 DPH3Q96FX2 82 aa14.49□□□□□ -0.09
ACTN4-210ENST00000588618 LINC00308Q8TCZ7 52 aa14.48□□□□□ -0.09
ACTN4-210ENST00000588618 CHTF8P0CG12 524 aa14.46□□□□□ -0.1
ACTN4-210ENST00000588618 DDTP30046 118 aa14.45□□□□□ -0.1
ACTN4-210ENST00000588618 TAL2Q16559 108 aa14.45□□□□□ -0.1
ACTN4-210ENST00000588618 C9orf129Q5T035 196 aaKnown RBP14.45□□□□□ -0.1
ACTN4-210ENST00000588618 MUSTN1Q8IVN3 82 aa14.45□□□□□ -0.1
ACTN4-210ENST00000588618 HSD52Q0P140 79 aa14.44□□□□□ -0.1
ACTN4-210ENST00000588618 PANO1I0J062 215 aa14.43□□□□□ -0.1
ACTN4-210ENST00000588618 CTAG1AP78358 180 aa14.43□□□□□ -0.1
ACTN4-210ENST00000588618 RPL24P83731 157 aaKnown RBP14.43□□□□□ -0.1
ACTN4-210ENST00000588618 Q8NDZ9 215 aa14.43□□□□□ -0.1
ACTN4-210ENST00000588618 KRTAP10-1P60331 282 aa14.42□□□□□ -0.1
ACTN4-210ENST00000588618 LOC107984156A0A0G2JMH3 177 aa14.41□□□□□ -0.1
ACTN4-210ENST00000588618 ARL17AQ8IVW1 177 aa14.41□□□□□ -0.1
ACTN4-210ENST00000588618 SPACA4Q8TDM5 124 aa14.41□□□□□ -0.1
ACTN4-210ENST00000588618 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.41□□□□□ -0.1
ACTN4-210ENST00000588618 PCP4L1A6NKN8 68 aa14.41□□□□□ -0.1
ACTN4-210ENST00000588618 CEND1Q8N111 149 aa14.41□□□□□ -0.1
ACTN4-210ENST00000588618 PPDPFQ9H3Y8 114 aa14.4□□□□□ -0.1
ACTN4-210ENST00000588618 FAM19A5Q7Z5A7 132 aaPredicted RBP14.38□□□□□ -0.11
ACTN4-210ENST00000588618 FAM168BA1KXE4 195 aa14.38□□□□□ -0.11
ACTN4-210ENST00000588618 NKAPP1Q8N9T2 125 aa14.38□□□□□ -0.11
ACTN4-210ENST00000588618 TMEM238LA0A1B0GVL6 79 aa14.37□□□□□ -0.11
ACTN4-210ENST00000588618 A6NJY4 79 aa14.37□□□□□ -0.11
ACTN4-210ENST00000588618 PLA2G2DQ9UNK4 145 aa14.37□□□□□ -0.11
ACTN4-210ENST00000588618 NDUFC2O95298 119 aa14.36□□□□□ -0.11
ACTN4-210ENST00000588618 FXYD2P54710 66 aa14.36□□□□□ -0.11
ACTN4-210ENST00000588618 KRTAP7-1Q8IUC3 87 aa14.36□□□□□ -0.11
ACTN4-210ENST00000588618 SERTAD4-AS1Q5TG53 156 aa14.35□□□□□ -0.11
ACTN4-210ENST00000588618 EPPK1P58107 5090 aaKnown RBP14.35□□□□□ -0.11
ACTN4-210ENST00000588618 A4D1N5 150 aa14.35□□□□□ -0.11
ACTN4-210ENST00000588618 APOBP04114 4563 aaKnown RBP14.34□□□□□ -0.11
ACTN4-210ENST00000588618 A0A087WYN8 130 aa14.34□□□□□ -0.11
ACTN4-210ENST00000588618 A0A1W2PNN7 141 aa14.34□□□□□ -0.11
ACTN4-210ENST00000588618 M0R143 59 aa14.34□□□□□ -0.11
ACTN4-210ENST00000588618 VPREB1P12018 145 aa14.34□□□□□ -0.11
ACTN4-210ENST00000588618 Q6ZSA8 131 aa14.33□□□□□ -0.12
ACTN4-210ENST00000588618 FAM30AQ9NZY2 134 aa14.33□□□□□ -0.12
ACTN4-210ENST00000588618 NCR3O14931 201 aa14.32□□□□□ -0.12
ACTN4-210ENST00000588618 HINT1P49773 126 aaPredicted RBP14.32□□□□□ -0.12
ACTN4-210ENST00000588618 PRR3P79522 188 aaKnown RBP14.32□□□□□ -0.12
ACTN4-210ENST00000588618 BVES-AS1Q5T3Y7 98 aa14.32□□□□□ -0.12
ACTN4-210ENST00000588618 M0QXV9 152 aa14.31□□□□□ -0.12
ACTN4-210ENST00000588618 C22orf24Q9Y442 160 aa14.3□□□□□ -0.12
ACTN4-210ENST00000588618 IGLV5-37A0A075B6J1 123 aa14.29□□□□□ -0.12
ACTN4-210ENST00000588618 IGKV2-28A0A075B6P5 120 aa14.29□□□□□ -0.12
ACTN4-210ENST00000588618 IGKV2D-28P01615 120 aa14.29□□□□□ -0.12
ACTN4-210ENST00000588618 PLAC8Q9NZF1 115 aa14.29□□□□□ -0.12
ACTN4-210ENST00000588618 TRBV10-2A0A0K0K1G8 114 aa14.28□□□□□ -0.12
ACTN4-210ENST00000588618 M0R378 163 aa14.28□□□□□ -0.12
ACTN4-210ENST00000588618 S100A7L2Q5SY68 101 aa14.28□□□□□ -0.12
ACTN4-210ENST00000588618 MRPL55Q7Z7F7 128 aaKnown RBP14.28□□□□□ -0.12
ACTN4-210ENST00000588618 LBHQ53QV2 105 aaPredicted RBP14.27□□□□□ -0.12
ACTN4-210ENST00000588618 SCXQ7RTU7 201 aa14.27□□□□□ -0.13
ACTN4-210ENST00000588618 OR13C6PQ8NH95 151 aa14.27□□□□□ -0.13
ACTN4-210ENST00000588618 CIRBP-AS1Q8TBR5 109 aa14.27□□□□□ -0.13
ACTN4-210ENST00000588618 RAB37Q96AX2 223 aa14.27□□□□□ -0.13
ACTN4-210ENST00000588618 NHP2Q9NX24 153 aaKnown RBP14.27□□□□□ -0.13
ACTN4-210ENST00000588618 TRAV13-2A0A0B4J235 113 aa14.26□□□□□ -0.13
ACTN4-210ENST00000588618 A6NDN8 102 aa14.26□□□□□ -0.13
ACTN4-210ENST00000588618 GAGE10A6NGK3 116 aa14.26□□□□□ -0.13
ACTN4-210ENST00000588618 BATFQ16520 125 aa14.26□□□□□ -0.13
ACTN4-210ENST00000588618 CFC1BP0CG36 223 aa14.24□□□□□ -0.13
ACTN4-210ENST00000588618 CFC1P0CG37 223 aa14.24□□□□□ -0.13
ACTN4-210ENST00000588618 PHF5AQ7RTV0 110 aaKnown RBP14.24□□□□□ -0.13
ACTN4-210ENST00000588618 LINC00337Q8N6G1 96 aa14.24□□□□□ -0.13
ACTN4-210ENST00000588618 C7orf33Q8WU49 177 aa14.24□□□□□ -0.13
ACTN4-210ENST00000588618 UBE2BP63146 152 aa14.23□□□□□ -0.13
ACTN4-210ENST00000588618 HAMPP81172 84 aa14.23□□□□□ -0.13
ACTN4-210ENST00000588618 A0A0B4J2C4 111 aa14.22□□□□□ -0.13
ACTN4-210ENST00000588618 LINC00167Q96N53 147 aa14.22□□□□□ -0.13
ACTN4-210ENST00000588618 SNHG12Q9BXW3 62 aa14.22□□□□□ -0.13
ACTN4-210ENST00000588618 TMEM126AQ9H061 195 aa14.22□□□□□ -0.13
ACTN4-210ENST00000588618 EPM2AB3EWF7 344 aa14.21□□□□□ -0.13
ACTN4-210ENST00000588618 K7ERJ3 54 aa14.21□□□□□ -0.14
ACTN4-210ENST00000588618 RPL37AP8A6NKH3 93 aa14.2□□□□□ -0.14
ACTN4-210ENST00000588618 TRBV10-3A0A0K0K1G6 114 aa14.19□□□□□ -0.14
ACTN4-210ENST00000588618 A0A1B0GWB2 263 aa14.19□□□□□ -0.14
ACTN4-210ENST00000588618 CBY1Q9Y3M2 126 aa14.18□□□□□ -0.14
ACTN4-210ENST00000588618 RPL13AP40429 203 aaKnown RBP14.18□□□□□ -0.14
ACTN4-210ENST00000588618 PRO1854Q9UHT4 67 aa14.18□□□□□ -0.14
ACTN4-210ENST00000588618 IGLV6-57P01721 117 aa14.17□□□□□ -0.14
ACTN4-210ENST00000588618 IGLV1-50A0A075B6I6 118 aa14.15□□□□□ -0.14
ACTN4-210ENST00000588618 H7C2G1 150 aa14.15□□□□□ -0.14
ACTN4-210ENST00000588618 Q1RN00 199 aa14.15□□□□□ -0.14
ACTN4-210ENST00000588618 XGP55808 180 aa14.14□□□□□ -0.15
ACTN4-210ENST00000588618 TRAV23DV6A0A075B6W5 121 aa14.13□□□□□ -0.15
ACTN4-210ENST00000588618 KRTAP11-1Q8IUC1 163 aa14.13□□□□□ -0.15
ACTN4-210ENST00000588618 FAT1Q14517 4588 aa14.12□□□□□ -0.15
ACTN4-210ENST00000588618 PRYO14603 147 aa14.1□□□□□ -0.15
ACTN4-210ENST00000588618 KCNQ1DNQ9H478 68 aa14.1□□□□□ -0.15
ACTN4-210ENST00000588618 HSPG2P98160 4391 aa14.1□□□□□ -0.15
ACTN4-210ENST00000588618 CDK2AP2O75956 126 aa14.1□□□□□ -0.15
ACTN4-210ENST00000588618 REG3GQ6UW15 175 aa14.08□□□□□ -0.16
ACTN4-210ENST00000588618 SMIM11BQ8TCY0 68 aa14.07□□□□□ -0.16
ACTN4-210ENST00000588618 RYR1P21817 5038 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms