RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.46□□□□□ -1.05
SMARCA4-208ENST00000585799 TRACP01848 142 aa8.46□□□□□ -1.06
SMARCA4-208ENST00000585799 RMI2Q96E14 147 aa8.45□□□□□ -1.06
SMARCA4-208ENST00000585799 HIST1H4AP62805 103 aaKnown RBP8.45□□□□□ -1.06
SMARCA4-208ENST00000585799 RPL28P46779 137 aaKnown RBP8.45□□□□□ -1.06
SMARCA4-208ENST00000585799 SCGB1A1P11684 91 aa8.44□□□□□ -1.06
SMARCA4-208ENST00000585799 Q6ZRU5 148 aa8.44□□□□□ -1.06
SMARCA4-208ENST00000585799 STAB2Q8WWQ8 2551 aa8.44□□□□□ -1.06
SMARCA4-208ENST00000585799 IGKV3D-7A0A0C4DH55 119 aa8.44□□□□□ -1.06
SMARCA4-208ENST00000585799 FAM19A3Q7Z5A8 133 aa8.44□□□□□ -1.06
SMARCA4-208ENST00000585799 DIRC1Q969H9 104 aa8.44□□□□□ -1.06
SMARCA4-208ENST00000585799 TENM3Q9P273 2699 aa8.43□□□□□ -1.06
SMARCA4-208ENST00000585799 KLK5Q9Y337 293 aaPredicted RBP8.43□□□□□ -1.06
SMARCA4-208ENST00000585799 TRBV10-3A0A0K0K1G6 114 aa8.43□□□□□ -1.06
SMARCA4-208ENST00000585799 K7EIL1 84 aa8.43□□□□□ -1.06
SMARCA4-208ENST00000585799 M0R2N4 97 aa8.42□□□□□ -1.06
SMARCA4-208ENST00000585799 C6orf48Q9UBA6 75 aa8.41□□□□□ -1.06
SMARCA4-208ENST00000585799 COX17Q14061 63 aa8.41□□□□□ -1.06
SMARCA4-208ENST00000585799 KIAA0087Q14695 138 aa8.41□□□□□ -1.06
SMARCA4-208ENST00000585799 Q6ZQY7 126 aa8.41□□□□□ -1.06
SMARCA4-208ENST00000585799 hADV29S1A0JD25 119 aa8.4□□□□□ -1.06
SMARCA4-208ENST00000585799 RPL37AP8A6NKH3 93 aa8.4□□□□□ -1.06
SMARCA4-208ENST00000585799 FAM19A5Q7Z5A7 132 aaPredicted RBP8.4□□□□□ -1.06
SMARCA4-208ENST00000585799 USP17L23D6RBM5 183 aa8.39□□□□□ -1.07
SMARCA4-208ENST00000585799 COX7BP24311 80 aa8.39□□□□□ -1.07
SMARCA4-208ENST00000585799 HAMPP81172 84 aa8.39□□□□□ -1.07
SMARCA4-208ENST00000585799 CDIP1Q9H305 208 aa8.39□□□□□ -1.07
SMARCA4-208ENST00000585799 ANK3Q12955 4377 aaKnown RBP8.39□□□□□ -1.07
SMARCA4-208ENST00000585799 TRAV23DV6A0A075B6W5 121 aa8.39□□□□□ -1.07
SMARCA4-208ENST00000585799 UBE2BP63146 152 aa8.38□□□□□ -1.07
SMARCA4-208ENST00000585799 EGFEM1PQ0D2K5 195 aa8.38□□□□□ -1.07
SMARCA4-208ENST00000585799 ETDCA0A1B0GVM5 59 aa8.37□□□□□ -1.07
SMARCA4-208ENST00000585799 DSCR8Q96T75 97 aa8.37□□□□□ -1.07
SMARCA4-208ENST00000585799 MDFIQ99750 246 aa8.37□□□□□ -1.07
SMARCA4-208ENST00000585799 LINC00588Q9Y4M8 146 aa8.37□□□□□ -1.07
SMARCA4-208ENST00000585799 TRRAPQ9Y4A5 3859 aa8.36□□□□□ -1.07
SMARCA4-208ENST00000585799 LINC01556Q5JQF7 62 aa8.36□□□□□ -1.07
SMARCA4-208ENST00000585799 TMEM256-PLSCR3K7ERE1 68 aa8.36□□□□□ -1.07
SMARCA4-208ENST00000585799 LINC01561Q8N1V8 128 aa8.36□□□□□ -1.07
SMARCA4-208ENST00000585799 ZNF73O43830 326 aaPredicted RBP8.35□□□□□ -1.07
SMARCA4-208ENST00000585799 PRR34Q9NV39 138 aa8.35□□□□□ -1.07
SMARCA4-208ENST00000585799 RBM3P98179 157 aaKnown RBP8.34□□□□□ -1.07
SMARCA4-208ENST00000585799 Q8N814 137 aa8.34□□□□□ -1.07
SMARCA4-208ENST00000585799 WIPF1O43516 503 aa8.34□□□□□ -1.07
SMARCA4-208ENST00000585799 PKD1L1Q8TDX9 2849 aa8.34□□□□□ -1.07
SMARCA4-208ENST00000585799 NDUFC2-KCTD14E9PQ53 114 aa8.34□□□□□ -1.07
SMARCA4-208ENST00000585799 SDIM1Q6ZPB5 146 aa8.34□□□□□ -1.07
SMARCA4-208ENST00000585799 FAM236AA0A1B0GUQ0 79 aa8.33□□□□□ -1.08
SMARCA4-208ENST00000585799 FAM236BA0A1B0GV22 79 aa8.33□□□□□ -1.08
SMARCA4-208ENST00000585799 H3BNG1 76 aa8.33□□□□□ -1.08
SMARCA4-208ENST00000585799 GHRHP01286 108 aa8.33□□□□□ -1.08
SMARCA4-208ENST00000585799 UBL5Q9BZL1 73 aa8.33□□□□□ -1.08
SMARCA4-208ENST00000585799 M0R378 163 aa8.33□□□□□ -1.08
SMARCA4-208ENST00000585799 NDUFC2O95298 119 aa8.33□□□□□ -1.08
SMARCA4-208ENST00000585799 ACYP1P07311 99 aa8.32□□□□□ -1.08
SMARCA4-208ENST00000585799 AKAP9Q99996 3911 aa8.32□□□□□ -1.08
SMARCA4-208ENST00000585799 JMJD7-PLA2G4BH0Y9G9 81 aa8.31□□□□□ -1.08
SMARCA4-208ENST00000585799 CASC10Q5T4H9 136 aa8.31□□□□□ -1.08
SMARCA4-208ENST00000585799 HIGD2AQ9BW72 106 aa8.3□□□□□ -1.08
SMARCA4-208ENST00000585799 LINC00643Q86TS7 51 aa8.29□□□□□ -1.08
SMARCA4-208ENST00000585799 Q6ZRP5 223 aa8.28□□□□□ -1.08
SMARCA4-208ENST00000585799 SCXQ7RTU7 201 aa8.28□□□□□ -1.08
SMARCA4-208ENST00000585799 C15orf56Q8N910 161 aa8.28□□□□□ -1.08
SMARCA4-208ENST00000585799 LINC00575Q6W349 94 aa8.28□□□□□ -1.08
SMARCA4-208ENST00000585799 C2orf48Q96LS8 159 aa8.28□□□□□ -1.08
SMARCA4-208ENST00000585799 C9orf129Q5T035 196 aaKnown RBP8.27□□□□□ -1.09
SMARCA4-208ENST00000585799 B5MCH6 92 aa8.27□□□□□ -1.09
SMARCA4-208ENST00000585799 Q8NDZ9 215 aa8.27□□□□□ -1.09
SMARCA4-208ENST00000585799 TM2D3Q9BRN9 247 aa8.26□□□□□ -1.09
SMARCA4-208ENST00000585799 A0A096LNI7 61 aa8.25□□□□□ -1.09
SMARCA4-208ENST00000585799 F8WEM9 126 aa8.25□□□□□ -1.09
SMARCA4-208ENST00000585799 M0QXV9 152 aa8.25□□□□□ -1.09
SMARCA4-208ENST00000585799 DNAH10OSP0CZ25 163 aa8.25□□□□□ -1.09
SMARCA4-208ENST00000585799 NDUFV3P56181 108 aaKnown RBP8.25□□□□□ -1.09
SMARCA4-208ENST00000585799 FAM168BA1KXE4 195 aa8.25□□□□□ -1.09
SMARCA4-208ENST00000585799 FAM19A1Q7Z5A9 133 aa8.24□□□□□ -1.09
SMARCA4-208ENST00000585799 C7orf33Q8WU49 177 aa8.24□□□□□ -1.09
SMARCA4-208ENST00000585799 LINC00846Q9NV44 126 aa8.24□□□□□ -1.09
SMARCA4-208ENST00000585799 MUC7Q8TAX7 377 aa8.24□□□□□ -1.09
SMARCA4-208ENST00000585799 LOC107984640A0A0U1RRK4 108 aa8.23□□□□□ -1.09
SMARCA4-208ENST00000585799 A0A087WVE0 104 aa8.23□□□□□ -1.09
SMARCA4-208ENST00000585799 C3orf84H3BNL1 204 aa8.22□□□□□ -1.09
SMARCA4-208ENST00000585799 VPREB1P12018 145 aa8.22□□□□□ -1.09
SMARCA4-208ENST00000585799 SERTAD4-AS1Q5TG53 156 aa8.22□□□□□ -1.09
SMARCA4-208ENST00000585799 PPDPFQ9H3Y8 114 aa8.22□□□□□ -1.09
SMARCA4-208ENST00000585799 A0A1B0GX51 115 aa8.21□□□□□ -1.1
SMARCA4-208ENST00000585799 FAM240AA0A1B0GVK7 77 aa8.21□□□□□ -1.1
SMARCA4-208ENST00000585799 CCKP06307 115 aa8.2□□□□□ -1.1
SMARCA4-208ENST00000585799 C9orf153Q5TBE3 101 aa8.2□□□□□ -1.1
SMARCA4-208ENST00000585799 GVQW2A0A096LPI5 108 aaPredicted RBP8.2□□□□□ -1.1
SMARCA4-208ENST00000585799 C22orf24Q9Y442 160 aa8.2□□□□□ -1.1
SMARCA4-208ENST00000585799 C3orf22Q8N5N4 141 aa8.2□□□□□ -1.1
SMARCA4-208ENST00000585799 UBE2AP49459 152 aa8.19□□□□□ -1.1
SMARCA4-208ENST00000585799 LY6G6CO95867 125 aa8.19□□□□□ -1.1
SMARCA4-208ENST00000585799 IGLV6-57P01721 117 aa8.19□□□□□ -1.1
SMARCA4-208ENST00000585799 CHTF8P0CG12 524 aa8.19□□□□□ -1.1
SMARCA4-208ENST00000585799 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.19□□□□□ -1.1
SMARCA4-208ENST00000585799 LINC00167Q96N53 147 aa8.19□□□□□ -1.1
SMARCA4-208ENST00000585799 FUSP35637 526 aaKnown RBP eCLIP8.18□□□□□ -1.1
SMARCA4-208ENST00000585799 NREPQ16612 68 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms