RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 LINC01620Q4KN68 170 aa10.32□□□□□ -0.76
SS18-226ENST00000585241 GAGE2EQ4V326 116 aa10.32□□□□□ -0.76
SS18-226ENST00000585241 C9orf129Q5T035 196 aaKnown RBP10.32□□□□□ -0.76
SS18-226ENST00000585241 CEND1Q8N111 149 aa10.32□□□□□ -0.76
SS18-226ENST00000585241 XAGE1AQ9HD64 81 aa10.32□□□□□ -0.76
SS18-226ENST00000585241 GAGE2DQ9UEU5 116 aa10.32□□□□□ -0.76
SS18-226ENST00000585241 GAGE2BQ13066 116 aa10.31□□□□□ -0.76
SS18-226ENST00000585241 NPC2P61916 151 aa10.3□□□□□ -0.76
SS18-226ENST00000585241 PLA2G2DQ9UNK4 145 aa10.3□□□□□ -0.76
SS18-226ENST00000585241 NDUFC2O95298 119 aa10.29□□□□□ -0.76
SS18-226ENST00000585241 RPL24P83731 157 aaKnown RBP10.29□□□□□ -0.76
SS18-226ENST00000585241 LINC00474Q9P2X8 69 aa10.29□□□□□ -0.76
SS18-226ENST00000585241 FXYD2P54710 66 aa10.28□□□□□ -0.76
SS18-226ENST00000585241 Q8NDZ9 215 aa10.28□□□□□ -0.76
SS18-226ENST00000585241 BVES-AS1Q5T3Y7 98 aa10.27□□□□□ -0.77
SS18-226ENST00000585241 SPACA4Q8TDM5 124 aa10.27□□□□□ -0.77
SS18-226ENST00000585241 DNAH8Q96JB1 4490 aa10.27□□□□□ -0.77
SS18-226ENST00000585241 IGLV5-37A0A075B6J1 123 aa10.26□□□□□ -0.77
SS18-226ENST00000585241 IGKV2-24A0A0C4DH68 120 aa10.26□□□□□ -0.77
SS18-226ENST00000585241 A4D1N5 150 aa10.26□□□□□ -0.77
SS18-226ENST00000585241 M0R143 59 aa10.26□□□□□ -0.77
SS18-226ENST00000585241 CHTF8P0CG12 524 aa10.26□□□□□ -0.77
SS18-226ENST00000585241 VPREB1P12018 145 aa10.26□□□□□ -0.77
SS18-226ENST00000585241 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.26□□□□□ -0.77
SS18-226ENST00000585241 PCP4L1A6NKN8 68 aa10.25□□□□□ -0.77
SS18-226ENST00000585241 EPM2AB3EWF7 344 aa10.25□□□□□ -0.77
SS18-226ENST00000585241 PANO1I0J062 215 aa10.25□□□□□ -0.77
SS18-226ENST00000585241 Q6ZSA8 131 aa10.25□□□□□ -0.77
SS18-226ENST00000585241 KRTAP7-1Q8IUC3 87 aa10.25□□□□□ -0.77
SS18-226ENST00000585241 TMEM238LA0A1B0GVL6 79 aa10.24□□□□□ -0.77
SS18-226ENST00000585241 A6NJY4 79 aa10.24□□□□□ -0.77
SS18-226ENST00000585241 HINT1P49773 126 aaPredicted RBP10.24□□□□□ -0.77
SS18-226ENST00000585241 KRTAP10-1P60331 282 aa10.24□□□□□ -0.77
SS18-226ENST00000585241 SERTAD4-AS1Q5TG53 156 aa10.24□□□□□ -0.77
SS18-226ENST00000585241 DYNC1H1Q14204 4646 aaKnown RBP10.24□□□□□ -0.77
SS18-226ENST00000585241 IGKV2-28A0A075B6P5 120 aa10.23□□□□□ -0.77
SS18-226ENST00000585241 IGKV2D-28P01615 120 aa10.23□□□□□ -0.77
SS18-226ENST00000585241 TRBV10-2A0A0K0K1G8 114 aa10.22□□□□□ -0.77
SS18-226ENST00000585241 A0A1B0GWB2 263 aa10.22□□□□□ -0.77
SS18-226ENST00000585241 A0A1W2PNN7 141 aa10.22□□□□□ -0.77
SS18-226ENST00000585241 FAM168BA1KXE4 195 aa10.22□□□□□ -0.77
SS18-226ENST00000585241 PKHD1P08F94 4074 aa10.22□□□□□ -0.77
SS18-226ENST00000585241 LRP1BQ9NZR2 4599 aa10.21□□□□□ -0.77
SS18-226ENST00000585241 A0A0B4J2C4 111 aa10.21□□□□□ -0.77
SS18-226ENST00000585241 CFC1BP0CG36 223 aa10.2□□□□□ -0.78
SS18-226ENST00000585241 CFC1P0CG37 223 aa10.2□□□□□ -0.78
SS18-226ENST00000585241 PLAC8Q9NZF1 115 aa10.2□□□□□ -0.78
SS18-226ENST00000585241 FAM30AQ9NZY2 134 aa10.19□□□□□ -0.78
SS18-226ENST00000585241 A0A087WYN8 130 aa10.18□□□□□ -0.78
SS18-226ENST00000585241 M0R378 163 aa10.18□□□□□ -0.78
SS18-226ENST00000585241 NCR3O14931 201 aa10.18□□□□□ -0.78
SS18-226ENST00000585241 PRR3P79522 188 aaKnown RBP10.18□□□□□ -0.78
SS18-226ENST00000585241 FAM19A5Q7Z5A7 132 aaPredicted RBP10.18□□□□□ -0.78
SS18-226ENST00000585241 LINC00337Q8N6G1 96 aa10.18□□□□□ -0.78
SS18-226ENST00000585241 SNHG12Q9BXW3 62 aa10.18□□□□□ -0.78
SS18-226ENST00000585241 NHP2Q9NX24 153 aaKnown RBP10.18□□□□□ -0.78
SS18-226ENST00000585241 C22orf24Q9Y442 160 aa10.18□□□□□ -0.78
SS18-226ENST00000585241 NKAPP1Q8N9T2 125 aa10.17□□□□□ -0.78
SS18-226ENST00000585241 TRAV13-2A0A0B4J235 113 aa10.16□□□□□ -0.78
SS18-226ENST00000585241 A6NDN8 102 aa10.16□□□□□ -0.78
SS18-226ENST00000585241 M0QXV9 152 aa10.16□□□□□ -0.78
SS18-226ENST00000585241 C7orf33Q8WU49 177 aa10.16□□□□□ -0.78
SS18-226ENST00000585241 IGLV6-57P01721 117 aa10.15□□□□□ -0.78
SS18-226ENST00000585241 MRPL55Q7Z7F7 128 aaKnown RBP10.15□□□□□ -0.78
SS18-226ENST00000585241 RAB37Q96AX2 223 aa10.14□□□□□ -0.79
SS18-226ENST00000585241 K7ERJ3 54 aa10.13□□□□□ -0.79
SS18-226ENST00000585241 BATFQ16520 125 aa10.13□□□□□ -0.79
SS18-226ENST00000585241 LBHQ53QV2 105 aaPredicted RBP10.13□□□□□ -0.79
SS18-226ENST00000585241 CIRBP-AS1Q8TBR5 109 aa10.13□□□□□ -0.79
SS18-226ENST00000585241 DPH3Q96FX2 82 aa10.13□□□□□ -0.79
SS18-226ENST00000585241 LINC00167Q96N53 147 aa10.13□□□□□ -0.79
SS18-226ENST00000585241 TMEM126AQ9H061 195 aa10.13□□□□□ -0.79
SS18-226ENST00000585241 PRO1854Q9UHT4 67 aa10.13□□□□□ -0.79
SS18-226ENST00000585241 TRBV10-3A0A0K0K1G6 114 aa10.12□□□□□ -0.79
SS18-226ENST00000585241 SCXQ7RTU7 201 aa10.12□□□□□ -0.79
SS18-226ENST00000585241 RPL13AP40429 203 aaKnown RBP10.11□□□□□ -0.79
SS18-226ENST00000585241 PHF5AQ7RTV0 110 aaKnown RBP10.11□□□□□ -0.79
SS18-226ENST00000585241 IGLV1-50A0A075B6I6 118 aa10.1□□□□□ -0.79
SS18-226ENST00000585241 S100A7L2Q5SY68 101 aa10.1□□□□□ -0.79
SS18-226ENST00000585241 OR13C6PQ8NH95 151 aa10.1□□□□□ -0.79
SS18-226ENST00000585241 GAGE10A6NGK3 116 aa10.09□□□□□ -0.79
SS18-226ENST00000585241 LCE2DQ5TA82 110 aaPredicted RBP10.09□□□□□ -0.79
SS18-226ENST00000585241 KCNQ1DNQ9H478 68 aa10.09□□□□□ -0.79
SS18-226ENST00000585241 APOBP04114 4563 aaKnown RBP10.09□□□□□ -0.79
SS18-226ENST00000585241 CBY1Q9Y3M2 126 aa10.08□□□□□ -0.8
SS18-226ENST00000585241 PRYO14603 147 aa10.07□□□□□ -0.8
SS18-226ENST00000585241 COL5A1-AS1Q5SY13 56 aa10.07□□□□□ -0.8
SS18-226ENST00000585241 TRAV23DV6A0A075B6W5 121 aa10.06□□□□□ -0.8
SS18-226ENST00000585241 RPL37AP8A6NKH3 93 aa10.06□□□□□ -0.8
SS18-226ENST00000585241 TSPAN13O95857 204 aa10.06□□□□□ -0.8
SS18-226ENST00000585241 RPL28P46779 137 aaKnown RBP10.06□□□□□ -0.8
SS18-226ENST00000585241 XGP55808 180 aa10.06□□□□□ -0.8
SS18-226ENST00000585241 KRTAP11-1Q8IUC1 163 aa10.06□□□□□ -0.8
SS18-226ENST00000585241 TAX1BP3O14907 124 aa10.05□□□□□ -0.8
SS18-226ENST00000585241 SPRR1AP35321 89 aa10.05□□□□□ -0.8
SS18-226ENST00000585241 SMIM11BQ8TCY0 68 aa10.05□□□□□ -0.8
SS18-226ENST00000585241 UBE2BP63146 152 aa10.04□□□□□ -0.8
SS18-226ENST00000585241 H7C2G1 150 aa10.03□□□□□ -0.8
SS18-226ENST00000585241 HAMPP81172 84 aa10.03□□□□□ -0.8
SS18-226ENST00000585241 EPPK1P58107 5090 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms