RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 C6orf48Q9UBA6 75 aa6.17□□□□□ -1.42
SS18-220ENST00000582092 CBY1Q9Y3M2 126 aa6.17□□□□□ -1.42
SS18-220ENST00000582092 C9JAW5 83 aa6.16□□□□□ -1.42
SS18-220ENST00000582092 USP17L23D6RBM5 183 aa6.16□□□□□ -1.42
SS18-220ENST00000582092 H0YGX0 51 aa6.16□□□□□ -1.42
SS18-220ENST00000582092 K7ERU9 68 aa6.16□□□□□ -1.42
SS18-220ENST00000582092 C14orf177Q52M58 125 aa6.16□□□□□ -1.42
SS18-220ENST00000582092 Q6ZRU5 148 aa6.16□□□□□ -1.42
SS18-220ENST00000582092 IGKV2-28A0A075B6P5 120 aa6.15□□□□□ -1.42
SS18-220ENST00000582092 NCR3O14931 201 aa6.15□□□□□ -1.42
SS18-220ENST00000582092 DNAL4O96015 105 aa6.15□□□□□ -1.42
SS18-220ENST00000582092 IGKV2D-28P01615 120 aa6.15□□□□□ -1.42
SS18-220ENST00000582092 RPL28P46779 137 aaKnown RBP6.15□□□□□ -1.42
SS18-220ENST00000582092 WFDC2Q14508 124 aa6.15□□□□□ -1.42
SS18-220ENST00000582092 RNF151Q2KHN1 245 aa6.15□□□□□ -1.42
SS18-220ENST00000582092 LINC01620Q4KN68 170 aa6.15□□□□□ -1.42
SS18-220ENST00000582092 GAGE2EQ4V326 116 aa6.15□□□□□ -1.42
SS18-220ENST00000582092 LINC00337Q8N6G1 96 aa6.15□□□□□ -1.42
SS18-220ENST00000582092 GAGE2DQ9UEU5 116 aa6.15□□□□□ -1.42
SS18-220ENST00000582092 NDUFC2-KCTD14E9PQ53 114 aa6.14□□□□□ -1.43
SS18-220ENST00000582092 SLC25A20O43772 301 aa6.14□□□□□ -1.43
SS18-220ENST00000582092 RPL18AQ02543 176 aaKnown RBP6.14□□□□□ -1.43
SS18-220ENST00000582092 LINC00336Q6ZUF6 198 aa6.14□□□□□ -1.43
SS18-220ENST00000582092 MTURNQ8N3F0 131 aa6.14□□□□□ -1.43
SS18-220ENST00000582092 SMIM11BQ8TCY0 68 aa6.14□□□□□ -1.43
SS18-220ENST00000582092 CLEC2BQ92478 149 aa6.14□□□□□ -1.43
SS18-220ENST00000582092 XAGE1AQ9HD64 81 aa6.14□□□□□ -1.43
SS18-220ENST00000582092 STARD9Q9P2P6 4700 aa6.13□□□□□ -1.43
SS18-220ENST00000582092 TRBV10-2A0A0K0K1G8 114 aa6.13□□□□□ -1.43
SS18-220ENST00000582092 LST1O00453 97 aa6.13□□□□□ -1.43
SS18-220ENST00000582092 OCIAD2Q56VL3 154 aa6.13□□□□□ -1.43
SS18-220ENST00000582092 LECT2O14960 151 aa6.12□□□□□ -1.43
SS18-220ENST00000582092 PRR3P79522 188 aaKnown RBP6.12□□□□□ -1.43
SS18-220ENST00000582092 ETDBQ3ZM63 59 aa6.12□□□□□ -1.43
SS18-220ENST00000582092 ANKRD29Q8N6D5 301 aa6.12□□□□□ -1.43
SS18-220ENST00000582092 NKAPP1Q8N9T2 125 aa6.12□□□□□ -1.43
SS18-220ENST00000582092 PKIGQ9Y2B9 76 aa6.12□□□□□ -1.43
SS18-220ENST00000582092 DYNC2H1Q8NCM8 4307 aaKnown RBP6.12□□□□□ -1.43
SS18-220ENST00000582092 NBDYA0A0U1RRE5 68 aa6.11□□□□□ -1.43
SS18-220ENST00000582092 LOC107984640A0A0U1RRK4 108 aa6.11□□□□□ -1.43
SS18-220ENST00000582092 M0R2N4 97 aa6.11□□□□□ -1.43
SS18-220ENST00000582092 M0R378 163 aa6.11□□□□□ -1.43
SS18-220ENST00000582092 TRACP01848 142 aa6.11□□□□□ -1.43
SS18-220ENST00000582092 H3BT86 120 aa6.1□□□□□ -1.43
SS18-220ENST00000582092 PRO0461Q9UI25 63 aa6.1□□□□□ -1.43
SS18-220ENST00000582092 M0QXV9 152 aa6.09□□□□□ -1.43
SS18-220ENST00000582092 GAGE2BQ13066 116 aa6.09□□□□□ -1.43
SS18-220ENST00000582092 C1orf134Q5TEV5 83 aa6.09□□□□□ -1.43
SS18-220ENST00000582092 TEN1Q86WV5 123 aa6.09□□□□□ -1.43
SS18-220ENST00000582092 PPDPFLQ8WWR9 84 aa6.09□□□□□ -1.43
SS18-220ENST00000582092 ALMS1Q8TCU4 4167 aa6.08□□□□□ -1.44
SS18-220ENST00000582092 BAALC-AS2P0C853 105 aa6.08□□□□□ -1.44
SS18-220ENST00000582092 TLX1NBP0CAT3 122 aa6.08□□□□□ -1.44
SS18-220ENST00000582092 VPS25Q9BRG1 176 aa6.08□□□□□ -1.44
SS18-220ENST00000582092 TRAV23DV6A0A075B6W5 121 aa6.07□□□□□ -1.44
SS18-220ENST00000582092 A0A1B0GX51 115 aa6.07□□□□□ -1.44
SS18-220ENST00000582092 Q6ZRP5 223 aa6.07□□□□□ -1.44
SS18-220ENST00000582092 DIRC1Q969H9 104 aa6.07□□□□□ -1.44
SS18-220ENST00000582092 SACSQ9NZJ4 4579 aa6.07□□□□□ -1.44
SS18-220ENST00000582092 LYSTQ99698 3801 aa6.07□□□□□ -1.44
SS18-220ENST00000582092 RYR3Q15413 4870 aa6.06□□□□□ -1.44
SS18-220ENST00000582092 TRBV10-3A0A0K0K1G6 114 aa6.06□□□□□ -1.44
SS18-220ENST00000582092 GHRHP01286 108 aa6.06□□□□□ -1.44
SS18-220ENST00000582092 SMCPP49901 116 aaPredicted RBP6.06□□□□□ -1.44
SS18-220ENST00000582092 C6orf99Q4VX62 202 aa6.06□□□□□ -1.44
SS18-220ENST00000582092 Q6ZR54 194 aa6.06□□□□□ -1.44
SS18-220ENST00000582092 ORMDL1Q9P0S3 153 aa6.06□□□□□ -1.44
SS18-220ENST00000582092 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.05□□□□□ -1.44
SS18-220ENST00000582092 IGLV6-57P01721 117 aa6.05□□□□□ -1.44
SS18-220ENST00000582092 VPREB1P12018 145 aa6.05□□□□□ -1.44
SS18-220ENST00000582092 KRTAP1-5Q9BYS1 174 aa6.05□□□□□ -1.44
SS18-220ENST00000582092 DNAH1Q9P2D7 4330 aa6.04□□□□□ -1.44
SS18-220ENST00000582092 hADV29S1A0JD25 119 aa6.04□□□□□ -1.44
SS18-220ENST00000582092 H3BQ85 93 aa6.04□□□□□ -1.44
SS18-220ENST00000582092 COX7BP24311 80 aa6.04□□□□□ -1.44
SS18-220ENST00000582092 DPH3Q96FX2 82 aa6.04□□□□□ -1.44
SS18-220ENST00000582092 PLA2G2DQ9UNK4 145 aa6.04□□□□□ -1.44
SS18-220ENST00000582092 A0A087WYN8 130 aa6.03□□□□□ -1.44
SS18-220ENST00000582092 TRBV7-6A0A0J9YX20 115 aa6.03□□□□□ -1.44
SS18-220ENST00000582092 ZNF73O43830 326 aaPredicted RBP6.03□□□□□ -1.44
SS18-220ENST00000582092 SLPIP03973 132 aa6.03□□□□□ -1.44
SS18-220ENST00000582092 CNBPP62633 177 aaKnown RBP6.03□□□□□ -1.44
SS18-220ENST00000582092 C9orf129Q5T035 196 aaKnown RBP6.03□□□□□ -1.44
SS18-220ENST00000582092 Q8N814 137 aa6.03□□□□□ -1.44
SS18-220ENST00000582092 FAM218AQ96MZ4 157 aa6.03□□□□□ -1.44
SS18-220ENST00000582092 RYR2Q92736 4967 aa6.02□□□□□ -1.45
SS18-220ENST00000582092 RTL8CO15255 209 aa6.02□□□□□ -1.45
SS18-220ENST00000582092 Q8NDZ9 215 aa6.02□□□□□ -1.45
SS18-220ENST00000582092 LINC01600Q96MT4 127 aa6.02□□□□□ -1.45
SS18-220ENST00000582092 PLECQ15149 4684 aaKnown RBP6.01□□□□□ -1.45
SS18-220ENST00000582092 IGKV2-24A0A0C4DH68 120 aa6.01□□□□□ -1.45
SS18-220ENST00000582092 C16orf90A8MZG2 172 aa6.01□□□□□ -1.45
SS18-220ENST00000582092 TMEM256-PLSCR3K7ERE1 68 aa6.01□□□□□ -1.45
SS18-220ENST00000582092 INAFM2P0DMQ5 153 aa6.01□□□□□ -1.45
SS18-220ENST00000582092 LINC00575Q6W349 94 aa6.01□□□□□ -1.45
SS18-220ENST00000582092 FAM19A5Q7Z5A7 132 aaPredicted RBP6.01□□□□□ -1.45
SS18-220ENST00000582092 LINC00474Q9P2X8 69 aa6.01□□□□□ -1.45
SS18-220ENST00000582092 TEX49A0A1B0GTD5 131 aa6□□□□□ -1.45
SS18-220ENST00000582092 ETDCA0A1B0GVM5 59 aa6□□□□□ -1.45
SS18-220ENST00000582092 C7orf33Q8WU49 177 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms