RNA–Protein interactions for RNA: ENST00000581705.5

SNX11-209, Transcript of sorting nexin 11, humanhuman

TSL 2

Gene SNX11, Length 1,426 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-209ENST00000581705 SNHG12Q9BXW3 62 aa13.34□□□□□ -0.27
SNX11-209ENST00000581705 LOC107984156A0A0G2JMH3 177 aa13.33□□□□□ -0.28
SNX11-209ENST00000581705 LECT2O14960 151 aa13.33□□□□□ -0.28
SNX11-209ENST00000581705 KRTAP10-1P60331 282 aa13.33□□□□□ -0.28
SNX11-209ENST00000581705 MUSTN1Q8IVN3 82 aa13.33□□□□□ -0.28
SNX11-209ENST00000581705 ARL17AQ8IVW1 177 aa13.33□□□□□ -0.28
SNX11-209ENST00000581705 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.32□□□□□ -0.28
SNX11-209ENST00000581705 TLX1NBP0CAT3 122 aa13.32□□□□□ -0.28
SNX11-209ENST00000581705 XGP55808 180 aa13.32□□□□□ -0.28
SNX11-209ENST00000581705 FAT1Q14517 4588 aa13.32□□□□□ -0.28
SNX11-209ENST00000581705 A0A0U1RRA0 63 aa13.31□□□□□ -0.28
SNX11-209ENST00000581705 A6NDN8 102 aa13.31□□□□□ -0.28
SNX11-209ENST00000581705 FXYD2P54710 66 aa13.31□□□□□ -0.28
SNX11-209ENST00000581705 LBHQ53QV2 105 aaPredicted RBP13.31□□□□□ -0.28
SNX11-209ENST00000581705 NDUFC2-KCTD14E9PQ53 114 aa13.3□□□□□ -0.28
SNX11-209ENST00000581705 SLPIP03973 132 aa13.3□□□□□ -0.28
SNX11-209ENST00000581705 C9orf116Q5BN46 136 aaPredicted RBP13.3□□□□□ -0.28
SNX11-209ENST00000581705 DAND5Q8N907 189 aa13.3□□□□□ -0.28
SNX11-209ENST00000581705 PKIGQ9Y2B9 76 aa13.3□□□□□ -0.28
SNX11-209ENST00000581705 EPM2AB3EWF7 344 aa13.29□□□□□ -0.28
SNX11-209ENST00000581705 BATFQ16520 125 aa13.28□□□□□ -0.28
SNX11-209ENST00000581705 Q8N814 137 aa13.28□□□□□ -0.28
SNX11-209ENST00000581705 A0A1B0GWB2 263 aa13.27□□□□□ -0.29
SNX11-209ENST00000581705 SOSTDC1Q6X4U4 206 aa13.27□□□□□ -0.29
SNX11-209ENST00000581705 A4D1N5 150 aa13.26□□□□□ -0.29
SNX11-209ENST00000581705 COL5A1-AS1Q5SY13 56 aa13.26□□□□□ -0.29
SNX11-209ENST00000581705 SND1-IT1Q9HBX3 110 aa13.26□□□□□ -0.29
SNX11-209ENST00000581705 IGLV5-52A0A0A0MRZ9 124 aa13.25□□□□□ -0.29
SNX11-209ENST00000581705 A0A0B4J2C4 111 aa13.24□□□□□ -0.29
SNX11-209ENST00000581705 LOC107984640A0A0U1RRK4 108 aa13.23□□□□□ -0.29
SNX11-209ENST00000581705 NDUFC2O95298 119 aa13.23□□□□□ -0.29
SNX11-209ENST00000581705 NPC2P61916 151 aa13.23□□□□□ -0.29
SNX11-209ENST00000581705 VPS13BQ7Z7G8 4022 aa13.23□□□□□ -0.29
SNX11-209ENST00000581705 EIF4EBP3O60516 100 aaPredicted RBP13.22□□□□□ -0.29
SNX11-209ENST00000581705 NHP2Q9NX24 153 aaKnown RBP13.22□□□□□ -0.29
SNX11-209ENST00000581705 DNAH8Q96JB1 4490 aa13.22□□□□□ -0.29
SNX11-209ENST00000581705 C9orf163Q8N9P6 203 aa13.22□□□□□ -0.29
SNX11-209ENST00000581705 CFC1BP0CG36 223 aa13.21□□□□□ -0.3
SNX11-209ENST00000581705 CFC1P0CG37 223 aa13.21□□□□□ -0.3
SNX11-209ENST00000581705 Q6ZRP5 223 aa13.21□□□□□ -0.3
SNX11-209ENST00000581705 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.2□□□□□ -0.3
SNX11-209ENST00000581705 Q5VSD8 79 aa13.2□□□□□ -0.3
SNX11-209ENST00000581705 RAB37Q96AX2 223 aa13.18□□□□□ -0.3
SNX11-209ENST00000581705 RPL18AQ02543 176 aaKnown RBP13.17□□□□□ -0.3
SNX11-209ENST00000581705 SMR3BP02814 79 aaPredicted RBP13.16□□□□□ -0.3
SNX11-209ENST00000581705 INAFM2P0DMQ5 153 aa13.16□□□□□ -0.3
SNX11-209ENST00000581705 HAMPP81172 84 aa13.16□□□□□ -0.3
SNX11-209ENST00000581705 PRO1854Q9UHT4 67 aa13.16□□□□□ -0.3
SNX11-209ENST00000581705 PLA2G2DQ9UNK4 145 aa13.16□□□□□ -0.3
SNX11-209ENST00000581705 TRAV13-2A0A0B4J235 113 aa13.15□□□□□ -0.3
SNX11-209ENST00000581705 GAGE2EQ4V326 116 aa13.15□□□□□ -0.3
SNX11-209ENST00000581705 GAGE2DQ9UEU5 116 aa13.15□□□□□ -0.3
SNX11-209ENST00000581705 TRBV10-2A0A0K0K1G8 114 aa13.14□□□□□ -0.31
SNX11-209ENST00000581705 XAGE1AQ9HD64 81 aa13.14□□□□□ -0.31
SNX11-209ENST00000581705 SRRM2Q9UQ35 2752 aaKnown RBP13.14□□□□□ -0.31
SNX11-209ENST00000581705 FAM30AQ9NZY2 134 aa13.13□□□□□ -0.31
SNX11-209ENST00000581705 K7ERJ3 54 aa13.13□□□□□ -0.31
SNX11-209ENST00000581705 LINC00474Q9P2X8 69 aa13.13□□□□□ -0.31
SNX11-209ENST00000581705 IGKV2-28A0A075B6P5 120 aa13.12□□□□□ -0.31
SNX11-209ENST00000581705 TAX1BP3O14907 124 aa13.12□□□□□ -0.31
SNX11-209ENST00000581705 IGKV2D-28P01615 120 aa13.12□□□□□ -0.31
SNX11-209ENST00000581705 C9orf129Q5T035 196 aaKnown RBP13.12□□□□□ -0.31
SNX11-209ENST00000581705 HERC1Q15751 4861 aa13.11□□□□□ -0.31
SNX11-209ENST00000581705 FAM229AH3BQW9 127 aa13.11□□□□□ -0.31
SNX11-209ENST00000581705 GAGE2BQ13066 116 aa13.11□□□□□ -0.31
SNX11-209ENST00000581705 DMBT1Q9UGM3 2413 aaPredicted RBP13.1□□□□□ -0.31
SNX11-209ENST00000581705 VPREB1P12018 145 aa13.1□□□□□ -0.31
SNX11-209ENST00000581705 SDIM1Q6ZPB5 146 aa13.1□□□□□ -0.31
SNX11-209ENST00000581705 MYCBP2O75592 4640 aa13.1□□□□□ -0.31
SNX11-209ENST00000581705 IGLV5-37A0A075B6J1 123 aa13.09□□□□□ -0.31
SNX11-209ENST00000581705 Q6ZSA8 131 aa13.09□□□□□ -0.31
SNX11-209ENST00000581705 C9orf118A6NHY6 69 aa13.08□□□□□ -0.32
SNX11-209ENST00000581705 LINC00337Q8N6G1 96 aa13.08□□□□□ -0.32
SNX11-209ENST00000581705 FLG2Q5D862 2391 aaPredicted RBP13.07□□□□□ -0.32
SNX11-209ENST00000581705 A0A096LNI7 61 aa13.07□□□□□ -0.32
SNX11-209ENST00000581705 TMEM126AQ9H061 195 aa13.07□□□□□ -0.32
SNX11-209ENST00000581705 RPL13AP40429 203 aaKnown RBP13.06□□□□□ -0.32
SNX11-209ENST00000581705 Q8NDZ9 215 aa13.06□□□□□ -0.32
SNX11-209ENST00000581705 M0R378 163 aa13.05□□□□□ -0.32
SNX11-209ENST00000581705 CBY1Q9Y3M2 126 aa13.05□□□□□ -0.32
SNX11-209ENST00000581705 TSPAN13O95857 204 aa13.05□□□□□ -0.32
SNX11-209ENST00000581705 NKAPP1Q8N9T2 125 aa13.03□□□□□ -0.32
SNX11-209ENST00000581705 NCR3O14931 201 aa13.02□□□□□ -0.33
SNX11-209ENST00000581705 IGLV6-57P01721 117 aa13.02□□□□□ -0.33
SNX11-209ENST00000581705 PRR3P79522 188 aaKnown RBP13.02□□□□□ -0.33
SNX11-209ENST00000581705 LINC01620Q4KN68 170 aa13.02□□□□□ -0.33
SNX11-209ENST00000581705 S100A7L2Q5SY68 101 aa13.02□□□□□ -0.33
SNX11-209ENST00000581705 IGKV2-24A0A0C4DH68 120 aa13.01□□□□□ -0.33
SNX11-209ENST00000581705 Q1RN00 199 aa13.01□□□□□ -0.33
SNX11-209ENST00000581705 SERTAD4-AS1Q5TG53 156 aa13.01□□□□□ -0.33
SNX11-209ENST00000581705 LYRM7Q5U5X0 104 aa13.01□□□□□ -0.33
SNX11-209ENST00000581705 OR13C6PQ8NH95 151 aa13.01□□□□□ -0.33
SNX11-209ENST00000581705 H3BUT2 72 aa13□□□□□ -0.33
SNX11-209ENST00000581705 RPL28P46779 137 aaKnown RBP13□□□□□ -0.33
SNX11-209ENST00000581705 H7C2G1 150 aa12.98□□□□□ -0.33
SNX11-209ENST00000581705 SPACA4Q8TDM5 124 aa12.98□□□□□ -0.33
SNX11-209ENST00000581705 A0A1W2PPM0 123 aa12.97□□□□□ -0.33
SNX11-209ENST00000581705 SCXQ7RTU7 201 aa12.97□□□□□ -0.33
SNX11-209ENST00000581705 LINC00528Q8N1L1 170 aa12.97□□□□□ -0.33
SNX11-209ENST00000581705 COX6CP09669 75 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms