RNA–Protein interactions for RNA: ENST00000580980.1

PSMD3-205, Transcript of proteasome 26S subunit, non-ATPase 3, humanhuman

TSL 2

Gene PSMD3, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD3-205ENST00000580980 LINC00587B1AMM8 73 aa7.6□□□□□ -1.19
PSMD3-205ENST00000580980 RPL18AQ02543 176 aaKnown RBP7.6□□□□□ -1.19
PSMD3-205ENST00000580980 COX17Q14061 63 aa7.6□□□□□ -1.19
PSMD3-205ENST00000580980 PAM16Q9Y3D7 125 aa7.6□□□□□ -1.19
PSMD3-205ENST00000580980 ZNF815PA8K554 130 aa7.59□□□□□ -1.19
PSMD3-205ENST00000580980 DLEU1O43261 78 aa7.59□□□□□ -1.19
PSMD3-205ENST00000580980 S100A12P80511 92 aa7.59□□□□□ -1.19
PSMD3-205ENST00000580980 SPATA45Q537H7 98 aa7.59□□□□□ -1.19
PSMD3-205ENST00000580980 Q6ZRP5 223 aa7.59□□□□□ -1.19
PSMD3-205ENST00000580980 A0A1W2PNN7 141 aa7.58□□□□□ -1.2
PSMD3-205ENST00000580980 NDUFC2-KCTD14E9PQ53 114 aa7.58□□□□□ -1.2
PSMD3-205ENST00000580980 COX8AP10176 69 aa7.58□□□□□ -1.2
PSMD3-205ENST00000580980 C9orf116Q5BN46 136 aaPredicted RBP7.58□□□□□ -1.2
PSMD3-205ENST00000580980 PCP2Q8IVA1 136 aa7.58□□□□□ -1.2
PSMD3-205ENST00000580980 ERG28Q9UKR5 140 aa7.58□□□□□ -1.2
PSMD3-205ENST00000580980 A0A0J9YXY3 114 aa7.57□□□□□ -1.2
PSMD3-205ENST00000580980 TIMM17BO60830 172 aa7.57□□□□□ -1.2
PSMD3-205ENST00000580980 SPINK6Q6UWN8 80 aa7.57□□□□□ -1.2
PSMD3-205ENST00000580980 BOD1L2Q8IYS8 172 aa7.57□□□□□ -1.2
PSMD3-205ENST00000580980 TTTY13Q9BZ97 58 aa7.57□□□□□ -1.2
PSMD3-205ENST00000580980 MT1HL1P0DM35 61 aa7.55□□□□□ -1.2
PSMD3-205ENST00000580980 SRSF9Q13242 221 aaKnown RBP eCLIP7.54□□□□□ -1.2
PSMD3-205ENST00000580980 MEIG1Q5JSS6 88 aa7.54□□□□□ -1.2
PSMD3-205ENST00000580980 LITAFQ99732 161 aa7.54□□□□□ -1.2
PSMD3-205ENST00000580980 SLC25A34Q6PIV7 304 aa7.53□□□□□ -1.2
PSMD3-205ENST00000580980 REG3GQ6UW15 175 aa7.53□□□□□ -1.2
PSMD3-205ENST00000580980 SCGB1D4Q6XE38 83 aa7.53□□□□□ -1.2
PSMD3-205ENST00000580980 LINC01600Q96MT4 127 aa7.53□□□□□ -1.2
PSMD3-205ENST00000580980 C12orf57Q99622 126 aa7.53□□□□□ -1.2
PSMD3-205ENST00000580980 PPDPFQ9H3Y8 114 aa7.53□□□□□ -1.2
PSMD3-205ENST00000580980 TMEM238C9JI98 176 aa7.52□□□□□ -1.21
PSMD3-205ENST00000580980 SMIM13P0DJ93 91 aa7.52□□□□□ -1.21
PSMD3-205ENST00000580980 PFN2P35080 140 aa7.52□□□□□ -1.21
PSMD3-205ENST00000580980 LINC00158P58513 81 aa7.52□□□□□ -1.21
PSMD3-205ENST00000580980 GAGE2EQ4V326 116 aa7.52□□□□□ -1.21
PSMD3-205ENST00000580980 Q6ZVH6 145 aa7.52□□□□□ -1.21
PSMD3-205ENST00000580980 PHF5AQ7RTV0 110 aaKnown RBP7.52□□□□□ -1.21
PSMD3-205ENST00000580980 LINC00518Q8N0U6 118 aa7.52□□□□□ -1.21
PSMD3-205ENST00000580980 C14orf144Q96I85 54 aa7.52□□□□□ -1.21
PSMD3-205ENST00000580980 SPANXDQ9BXN6 97 aa7.52□□□□□ -1.21
PSMD3-205ENST00000580980 SPANXCQ9NY87 97 aa7.52□□□□□ -1.21
PSMD3-205ENST00000580980 GAGE2DQ9UEU5 116 aa7.52□□□□□ -1.21
PSMD3-205ENST00000580980 LOC107984156A0A0G2JMH3 177 aa7.51□□□□□ -1.21
PSMD3-205ENST00000580980 ARL17AQ8IVW1 177 aa7.51□□□□□ -1.21
PSMD3-205ENST00000580980 MIR7-3HGQ8N6C7 128 aa7.51□□□□□ -1.21
PSMD3-205ENST00000580980 SPANXB1Q9NS25 103 aaPredicted RBP7.51□□□□□ -1.21
PSMD3-205ENST00000580980 HIGD1BQ9P298 99 aa7.51□□□□□ -1.21
PSMD3-205ENST00000580980 PSORS1C2Q9UIG4 136 aa7.51□□□□□ -1.21
PSMD3-205ENST00000580980 FAM168BA1KXE4 195 aa7.5□□□□□ -1.21
PSMD3-205ENST00000580980 SND1-IT1Q9HBX3 110 aa7.5□□□□□ -1.21
PSMD3-205ENST00000580980 UQCR10Q9UDW1 63 aa7.5□□□□□ -1.21
PSMD3-205ENST00000580980 ADAMTSL4-AS1Q5T5F5 129 aa7.49□□□□□ -1.21
PSMD3-205ENST00000580980 FAM19A5Q7Z5A7 132 aaPredicted RBP7.49□□□□□ -1.21
PSMD3-205ENST00000580980 TP73-AS1Q9UF72 201 aa7.49□□□□□ -1.21
PSMD3-205ENST00000580980 PLA2G2DQ9UNK4 145 aa7.49□□□□□ -1.21
PSMD3-205ENST00000580980 IFITM1P13164 125 aa7.48□□□□□ -1.21
PSMD3-205ENST00000580980 C1orf137Q5JT78 98 aa7.48□□□□□ -1.21
PSMD3-205ENST00000580980 C9orf129Q5T035 196 aaKnown RBP7.48□□□□□ -1.21
PSMD3-205ENST00000580980 C2orf91Q6ZV80 131 aa7.48□□□□□ -1.21
PSMD3-205ENST00000580980 COPS9Q8WXC6 57 aa7.48□□□□□ -1.21
PSMD3-205ENST00000580980 A0A0U1RRA0 63 aa7.47□□□□□ -1.21
PSMD3-205ENST00000580980 KRTAP7-1Q8IUC3 87 aa7.47□□□□□ -1.21
PSMD3-205ENST00000580980 HMCN2Q8NDA2 5059 aa7.47□□□□□ -1.21
PSMD3-205ENST00000580980 IGLV5-37A0A075B6J1 123 aa7.46□□□□□ -1.22
PSMD3-205ENST00000580980 M0QXV9 152 aa7.46□□□□□ -1.22
PSMD3-205ENST00000580980 IGLV7-43P04211 117 aa7.46□□□□□ -1.22
PSMD3-205ENST00000580980 KRTAP10-8P60410 259 aa7.46□□□□□ -1.22
PSMD3-205ENST00000580980 DAND5Q8N907 189 aa7.46□□□□□ -1.22
PSMD3-205ENST00000580980 LINC00308Q8TCZ7 52 aa7.46□□□□□ -1.22
PSMD3-205ENST00000580980 MIEN1Q9BRT3 115 aa7.46□□□□□ -1.22
PSMD3-205ENST00000580980 XAGE1AQ9HD64 81 aa7.46□□□□□ -1.22
PSMD3-205ENST00000580980 TSTD3H0UI37 97 aa7.45□□□□□ -1.22
PSMD3-205ENST00000580980 NDUFC2O95298 119 aa7.45□□□□□ -1.22
PSMD3-205ENST00000580980 TAL2Q16559 108 aa7.45□□□□□ -1.22
PSMD3-205ENST00000580980 SOSTDC1Q6X4U4 206 aa7.45□□□□□ -1.22
PSMD3-205ENST00000580980 TNXBP22105 4242 aa7.44□□□□□ -1.22
PSMD3-205ENST00000580980 VPREB1P12018 145 aa7.44□□□□□ -1.22
PSMD3-205ENST00000580980 UBE2BP63146 152 aa7.44□□□□□ -1.22
PSMD3-205ENST00000580980 KRTAP11-1Q8IUC1 163 aa7.44□□□□□ -1.22
PSMD3-205ENST00000580980 DIRC1Q969H9 104 aa7.44□□□□□ -1.22
PSMD3-205ENST00000580980 RPL24P83731 157 aaKnown RBP7.43□□□□□ -1.22
PSMD3-205ENST00000580980 LBHQ53QV2 105 aaPredicted RBP7.43□□□□□ -1.22
PSMD3-205ENST00000580980 PRO1933Q9H354 126 aa7.43□□□□□ -1.22
PSMD3-205ENST00000580980 TRBV10-2A0A0K0K1G8 114 aa7.42□□□□□ -1.22
PSMD3-205ENST00000580980 EIF4EBP3O60516 100 aaPredicted RBP7.42□□□□□ -1.22
PSMD3-205ENST00000580980 HSD52Q0P140 79 aa7.42□□□□□ -1.22
PSMD3-205ENST00000580980 Q8NDZ9 215 aa7.42□□□□□ -1.22
PSMD3-205ENST00000580980 HIST1H4GQ99525 98 aa7.42□□□□□ -1.22
PSMD3-205ENST00000580980 H0Y9J4 135 aa7.41□□□□□ -1.22
PSMD3-205ENST00000580980 MUSTN1Q8IVN3 82 aa7.41□□□□□ -1.22
PSMD3-205ENST00000580980 C22orf24Q9Y442 160 aa7.41□□□□□ -1.22
PSMD3-205ENST00000580980 NPC2P61916 151 aa7.39□□□□□ -1.23
PSMD3-205ENST00000580980 CEND1Q8N111 149 aa7.39□□□□□ -1.23
PSMD3-205ENST00000580980 NKAPP1Q8N9T2 125 aa7.39□□□□□ -1.23
PSMD3-205ENST00000580980 M0R378 163 aa7.38□□□□□ -1.23
PSMD3-205ENST00000580980 MRPL55Q7Z7F7 128 aaKnown RBP7.38□□□□□ -1.23
PSMD3-205ENST00000580980 IGKV2-28A0A075B6P5 120 aa7.37□□□□□ -1.23
PSMD3-205ENST00000580980 TMEM238LA0A1B0GVL6 79 aa7.37□□□□□ -1.23
PSMD3-205ENST00000580980 A6NJY4 79 aa7.37□□□□□ -1.23
PSMD3-205ENST00000580980 IGKV2D-28P01615 120 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms