RNA–Protein interactions for RNA: ENST00000579081.5

NF1-219, Transcript of neurofibromin 1, humanhuman

TSL 1 (best)

Gene NF1, Length 8,788 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-219ENST00000579081 PRO0461Q9UI25 63 aa3.66□□□□□ -1.82
NF1-219ENST00000579081 UQCR11O14957 56 aa3.66□□□□□ -1.82
NF1-219ENST00000579081 FAM229AH3BQW9 127 aa3.65□□□□□ -1.82
NF1-219ENST00000579081 A0A087WYN8 130 aa3.65□□□□□ -1.83
NF1-219ENST00000579081 IGLV1-40P01703 118 aa3.65□□□□□ -1.83
NF1-219ENST00000579081 USP9YO00507 2555 aaPredicted RBP3.65□□□□□ -1.83
NF1-219ENST00000579081 C1orf229Q6ZS94 237 aaPredicted RBP3.65□□□□□ -1.83
NF1-219ENST00000579081 C11orf21Q9P2W6 132 aa3.65□□□□□ -1.83
NF1-219ENST00000579081 TRBV7-4A0A0J9YYF1 115 aa3.64□□□□□ -1.83
NF1-219ENST00000579081 PRR3P79522 188 aaKnown RBP3.64□□□□□ -1.83
NF1-219ENST00000579081 Q6ZRU5 148 aa3.64□□□□□ -1.83
NF1-219ENST00000579081 ZFYVE26Q68DK2 2539 aa3.64□□□□□ -1.83
NF1-219ENST00000579081 SMIM1B2RUZ4 78 aa3.64□□□□□ -1.83
NF1-219ENST00000579081 IGLV4-60A0A075B6I1 120 aa3.64□□□□□ -1.83
NF1-219ENST00000579081 BRWD1-AS2P59051 145 aa3.64□□□□□ -1.83
NF1-219ENST00000579081 ODF3L2Q3SX64 289 aa3.63□□□□□ -1.83
NF1-219ENST00000579081 FHL2Q14192 279 aa3.63□□□□□ -1.83
NF1-219ENST00000579081 ADAMTSL4-AS1Q5T5F5 129 aa3.63□□□□□ -1.83
NF1-219ENST00000579081 NOTCH2NLQ7Z3S9 236 aa3.63□□□□□ -1.83
NF1-219ENST00000579081 SMR3AQ99954 134 aa3.63□□□□□ -1.83
NF1-219ENST00000579081 Q9UF83 564 aa3.63□□□□□ -1.83
NF1-219ENST00000579081 C22orf24Q9Y442 160 aa3.63□□□□□ -1.83
NF1-219ENST00000579081 J3QL48 77 aa3.62□□□□□ -1.83
NF1-219ENST00000579081 IGLV1-51P01701 117 aa3.62□□□□□ -1.83
NF1-219ENST00000579081 ABCA12Q86UK0 2595 aa3.62□□□□□ -1.83
NF1-219ENST00000579081 COX6B2Q6YFQ2 88 aa3.62□□□□□ -1.83
NF1-219ENST00000579081 ACANP16112 2415 aa3.61□□□□□ -1.83
NF1-219ENST00000579081 C6orf48Q9UBA6 75 aa3.61□□□□□ -1.83
NF1-219ENST00000579081 MUC6Q6W4X9 2439 aa3.61□□□□□ -1.83
NF1-219ENST00000579081 CDC42SE1Q9NRR8 79 aa3.61□□□□□ -1.83
NF1-219ENST00000579081 TRAV22A0A0B4J277 110 aa3.6□□□□□ -1.83
NF1-219ENST00000579081 SMIM29Q86T20 159 aa3.6□□□□□ -1.83
NF1-219ENST00000579081 MTORP42345 2549 aa3.6□□□□□ -1.83
NF1-219ENST00000579081 DMAC1Q96GE9 116 aa3.6□□□□□ -1.83
NF1-219ENST00000579081 C16orf95Q9H693 158 aa3.6□□□□□ -1.83
NF1-219ENST00000579081 GAS8-AS1O95177 125 aa3.6□□□□□ -1.83
NF1-219ENST00000579081 TM2D3Q9BRN9 247 aa3.6□□□□□ -1.83
NF1-219ENST00000579081 FN1P02751 2386 aaKnown RBP3.6□□□□□ -1.83
NF1-219ENST00000579081 TYMSOSQ8TAI1 123 aa3.6□□□□□ -1.83
NF1-219ENST00000579081 IGHV3OR16-9A0A0B4J2B5 98 aa3.59□□□□□ -1.83
NF1-219ENST00000579081 KIAA0087Q14695 138 aa3.59□□□□□ -1.83
NF1-219ENST00000579081 NOTCH2Q04721 2471 aa3.59□□□□□ -1.83
NF1-219ENST00000579081 LINC00313P59037 77 aa3.59□□□□□ -1.83
NF1-219ENST00000579081 LINC00167Q96N53 147 aa3.59□□□□□ -1.83
NF1-219ENST00000579081 FLG2Q5D862 2391 aaPredicted RBP3.59□□□□□ -1.83
NF1-219ENST00000579081 ZNF295-AS1Q8N0V1 137 aa3.59□□□□□ -1.83
NF1-219ENST00000579081 BDP1A6H8Y1 2624 aa3.59□□□□□ -1.84
NF1-219ENST00000579081 ANKRD17O75179 2603 aaKnown RBP3.59□□□□□ -1.84
NF1-219ENST00000579081 OBSCN-AS1Q96MR7 158 aa3.58□□□□□ -1.84
NF1-219ENST00000579081 SSBP3-AS1Q7Z2R9 100 aa3.58□□□□□ -1.84
NF1-219ENST00000579081 ANKRD11Q6UB99 2663 aaPredicted RBP3.58□□□□□ -1.84
NF1-219ENST00000579081 IGLV8-61A0A075B6I0 122 aa3.58□□□□□ -1.84
NF1-219ENST00000579081 LINC00310P59036 64 aa3.58□□□□□ -1.84
NF1-219ENST00000579081 CHD8Q9HCK8 2581 aa3.58□□□□□ -1.84
NF1-219ENST00000579081 TSPEAR-AS2P59090 65 aa3.57□□□□□ -1.84
NF1-219ENST00000579081 FHL3Q13643 280 aa3.57□□□□□ -1.84
NF1-219ENST00000579081 Q6ZRP5 223 aa3.57□□□□□ -1.84
NF1-219ENST00000579081 Q8NBF4 154 aa3.57□□□□□ -1.84
NF1-219ENST00000579081 LINC00846Q9NV44 126 aa3.57□□□□□ -1.84
NF1-219ENST00000579081 A8MTW9 85 aa3.57□□□□□ -1.84
NF1-219ENST00000579081 Q96NJ1 140 aa3.57□□□□□ -1.84
NF1-219ENST00000579081 C16orf90A8MZG2 172 aa3.57□□□□□ -1.84
NF1-219ENST00000579081 PLA2G2DQ9UNK4 145 aa3.57□□□□□ -1.84
NF1-219ENST00000579081 Q6ZPA2 131 aa3.57□□□□□ -1.84
NF1-219ENST00000579081 CRIPTQ9P021 101 aa3.57□□□□□ -1.84
NF1-219ENST00000579081 APLNQ9ULZ1 77 aa3.57□□□□□ -1.84
NF1-219ENST00000579081 KIF25-AS1Q9Y6Z4 181 aa3.57□□□□□ -1.84
NF1-219ENST00000579081 KRTAP10-9P60411 292 aa3.57□□□□□ -1.84
NF1-219ENST00000579081 JMJD1CQ15652 2540 aa3.56□□□□□ -1.84
NF1-219ENST00000579081 Q75L30 129 aa3.56□□□□□ -1.84
NF1-219ENST00000579081 C10orf142B7Z368 130 aa3.56□□□□□ -1.84
NF1-219ENST00000579081 COL27A1Q8IZC6 1860 aaPredicted RBP3.56□□□□□ -1.84
NF1-219ENST00000579081 SETD2Q9BYW2 2564 aaPredicted RBP3.55□□□□□ -1.84
NF1-219ENST00000579081 RTL8CO15255 209 aa3.55□□□□□ -1.84
NF1-219ENST00000579081 Q6ZQT0 140 aa3.55□□□□□ -1.84
NF1-219ENST00000579081 Q6ZSN1 163 aa3.55□□□□□ -1.84
NF1-219ENST00000579081 FASNP49327 2511 aaKnown RBP3.55□□□□□ -1.84
NF1-219ENST00000579081 PHF5AQ7RTV0 110 aaKnown RBP3.55□□□□□ -1.84
NF1-219ENST00000579081 CAMK2N1Q7Z7J9 78 aa3.54□□□□□ -1.84
NF1-219ENST00000579081 EPM2AB3EWF7 344 aa3.53□□□□□ -1.84
NF1-219ENST00000579081 KCNQ1DNQ9H478 68 aa3.53□□□□□ -1.84
NF1-219ENST00000579081 FAM104AQ969W3 186 aa3.53□□□□□ -1.84
NF1-219ENST00000579081 FAM19A4Q96LR4 140 aa3.53□□□□□ -1.84
NF1-219ENST00000579081 LINC00476Q8WZB0 136 aa3.53□□□□□ -1.84
NF1-219ENST00000579081 CHTF8P0CG12 524 aa3.52□□□□□ -1.85
NF1-219ENST00000579081 CRIP3Q6Q6R5 217 aa3.52□□□□□ -1.85
NF1-219ENST00000579081 LINC00336Q6ZUF6 198 aa3.52□□□□□ -1.85
NF1-219ENST00000579081 LINC00315P59091 139 aa3.52□□□□□ -1.85
NF1-219ENST00000579081 URB1-AS1Q96HZ7 61 aa3.51□□□□□ -1.85
NF1-219ENST00000579081 A0A096LNJ9 63 aa3.51□□□□□ -1.85
NF1-219ENST00000579081 NBDYA0A0U1RRE5 68 aa3.51□□□□□ -1.85
NF1-219ENST00000579081 H7BZZ5 65 aa3.51□□□□□ -1.85
NF1-219ENST00000579081 EPG5Q9HCE0 2579 aa3.51□□□□□ -1.85
NF1-219ENST00000579081 A8MWP4 228 aa3.51□□□□□ -1.85
NF1-219ENST00000579081 IGLV6-57P01721 117 aa3.51□□□□□ -1.85
NF1-219ENST00000579081 ST20-AS1Q8NBB2 130 aa3.5□□□□□ -1.85
NF1-219ENST00000579081 WWC2-AS2Q96NR7 200 aa3.5□□□□□ -1.85
NF1-219ENST00000579081 MRPL34Q9BQ48 92 aaKnown RBP3.5□□□□□ -1.85
NF1-219ENST00000579081 A0A0A0MQY5 61 aa3.5□□□□□ -1.85
NF1-219ENST00000579081 C9orf129Q5T035 196 aaKnown RBP3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms