RNA–Protein interactions for RNA: ENST00000578845.2

CDKN2A-212, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 2 BASIC

Gene CDKN2A, Length 678 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-212ENST00000578845 TMEM126AQ9H061 195 aa13.38□□□□□ -0.27
CDKN2A-212ENST00000578845 ANAPC11Q9NYG5 84 aa13.38□□□□□ -0.27
CDKN2A-212ENST00000578845 TSPAN13O95857 204 aa13.37□□□□□ -0.27
CDKN2A-212ENST00000578845 CHTOPQ9Y3Y2 248 aaKnown RBP13.37□□□□□ -0.27
CDKN2A-212ENST00000578845 TRAV12-1A0A0B4J245 112 aa13.35□□□□□ -0.27
CDKN2A-212ENST00000578845 M0R378 163 aa13.35□□□□□ -0.27
CDKN2A-212ENST00000578845 CHCHD1Q96BP2 118 aaKnown RBP13.35□□□□□ -0.27
CDKN2A-212ENST00000578845 COLCA2A8K830 154 aa13.34□□□□□ -0.27
CDKN2A-212ENST00000578845 TMEM238C9JI98 176 aa13.34□□□□□ -0.27
CDKN2A-212ENST00000578845 PRLHP81277 87 aa13.34□□□□□ -0.27
CDKN2A-212ENST00000578845 TMEM223A0PJW6 202 aa13.33□□□□□ -0.28
CDKN2A-212ENST00000578845 FAM19A1Q7Z5A9 133 aa13.33□□□□□ -0.28
CDKN2A-212ENST00000578845 IFI27L1Q96BM0 104 aa13.31□□□□□ -0.28
CDKN2A-212ENST00000578845 TRGC2P03986 189 aa13.28□□□□□ -0.28
CDKN2A-212ENST00000578845 LINC00158P58513 81 aa13.28□□□□□ -0.28
CDKN2A-212ENST00000578845 CTAG1AP78358 180 aa13.27□□□□□ -0.29
CDKN2A-212ENST00000578845 LCE2DQ5TA82 110 aaPredicted RBP13.27□□□□□ -0.29
CDKN2A-212ENST00000578845 LINC00304Q8N9R0 145 aa13.27□□□□□ -0.29
CDKN2A-212ENST00000578845 PLEKHB2Q96CS7 222 aa13.27□□□□□ -0.29
CDKN2A-212ENST00000578845 IGKV2D-26A0A0A0MRZ7 120 aa13.26□□□□□ -0.29
CDKN2A-212ENST00000578845 A0A0U1RRA0 63 aa13.23□□□□□ -0.29
CDKN2A-212ENST00000578845 SMIM13P0DJ93 91 aa13.22□□□□□ -0.29
CDKN2A-212ENST00000578845 HERV-K104P63124 156 aa13.22□□□□□ -0.29
CDKN2A-212ENST00000578845 HSBP1O75506 76 aa13.21□□□□□ -0.29
CDKN2A-212ENST00000578845 FAM19A2Q8N3H0 131 aa13.2□□□□□ -0.3
CDKN2A-212ENST00000578845 HIGD2AQ9BW72 106 aa13.2□□□□□ -0.3
CDKN2A-212ENST00000578845 MUC17Q685J3 4493 aa13.19□□□□□ -0.3
CDKN2A-212ENST00000578845 PRYO14603 147 aa13.19□□□□□ -0.3
CDKN2A-212ENST00000578845 MEIG1Q5JSS6 88 aa13.19□□□□□ -0.3
CDKN2A-212ENST00000578845 BOD1L2Q8IYS8 172 aa13.19□□□□□ -0.3
CDKN2A-212ENST00000578845 MIR7-3HGQ8N6C7 128 aa13.19□□□□□ -0.3
CDKN2A-212ENST00000578845 LINC00587B1AMM8 73 aa13.18□□□□□ -0.3
CDKN2A-212ENST00000578845 SPRR1AP35321 89 aa13.18□□□□□ -0.3
CDKN2A-212ENST00000578845 SPRR4Q96PI1 79 aa13.18□□□□□ -0.3
CDKN2A-212ENST00000578845 C3orf22Q8N5N4 141 aa13.17□□□□□ -0.3
CDKN2A-212ENST00000578845 RETNLBQ9BQ08 111 aa13.17□□□□□ -0.3
CDKN2A-212ENST00000578845 KCNQ1DNQ9H478 68 aa13.17□□□□□ -0.3
CDKN2A-212ENST00000578845 NDUFA12Q9UI09 145 aa13.17□□□□□ -0.3
CDKN2A-212ENST00000578845 LINC00337Q8N6G1 96 aa13.16□□□□□ -0.3
CDKN2A-212ENST00000578845 MYMXA0A1B0GTQ4 84 aa13.15□□□□□ -0.3
CDKN2A-212ENST00000578845 LINC00310P59036 64 aa13.15□□□□□ -0.3
CDKN2A-212ENST00000578845 KRTAP4-16G5E9R7 235 aaPredicted RBP13.14□□□□□ -0.31
CDKN2A-212ENST00000578845 ZNF706Q9Y5V0 76 aaPredicted RBP13.14□□□□□ -0.31
CDKN2A-212ENST00000578845 NCR3O14931 201 aa13.13□□□□□ -0.31
CDKN2A-212ENST00000578845 LEPROTL1O95214 131 aa13.13□□□□□ -0.31
CDKN2A-212ENST00000578845 TPRXLQ17RH7 258 aa13.13□□□□□ -0.31
CDKN2A-212ENST00000578845 LOC107984156A0A0G2JMH3 177 aa13.12□□□□□ -0.31
CDKN2A-212ENST00000578845 TSPEAR-AS2P59090 65 aa13.12□□□□□ -0.31
CDKN2A-212ENST00000578845 ARL17AQ8IVW1 177 aa13.12□□□□□ -0.31
CDKN2A-212ENST00000578845 MAP1LC3CQ9BXW4 147 aa13.12□□□□□ -0.31
CDKN2A-212ENST00000578845 FAT4Q6V0I7 4981 aa13.11□□□□□ -0.31
CDKN2A-212ENST00000578845 SERF1AO75920 110 aa13.11□□□□□ -0.31
CDKN2A-212ENST00000578845 SPAG11AQ6PDA7 123 aa13.11□□□□□ -0.31
CDKN2A-212ENST00000578845 H0Y8G0 127 aa13.1□□□□□ -0.31
CDKN2A-212ENST00000578845 LEPROTO15243 131 aa13.1□□□□□ -0.31
CDKN2A-212ENST00000578845 HIST1H2BKO60814 126 aa13.1□□□□□ -0.31
CDKN2A-212ENST00000578845 HIST1H2BJP06899 126 aa13.1□□□□□ -0.31
CDKN2A-212ENST00000578845 HIST1H2BOP23527 126 aa13.1□□□□□ -0.31
CDKN2A-212ENST00000578845 PLNP26678 52 aa13.1□□□□□ -0.31
CDKN2A-212ENST00000578845 HIST1H2BBP33778 126 aa13.1□□□□□ -0.31
CDKN2A-212ENST00000578845 HIST1H2BDP58876 126 aa13.1□□□□□ -0.31
CDKN2A-212ENST00000578845 HIST1H2BCP62807 126 aa13.1□□□□□ -0.31
CDKN2A-212ENST00000578845 HIST2H2BEQ16778 126 aa13.1□□□□□ -0.31
CDKN2A-212ENST00000578845 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.1□□□□□ -0.31
CDKN2A-212ENST00000578845 HIST1H2BHQ93079 126 aa13.1□□□□□ -0.31
CDKN2A-212ENST00000578845 HIST1H2BNQ99877 126 aa13.1□□□□□ -0.31
CDKN2A-212ENST00000578845 HIST1H2BMQ99879 126 aa13.1□□□□□ -0.31
CDKN2A-212ENST00000578845 TRBV10-3A0A0K0K1G6 114 aa13.09□□□□□ -0.31
CDKN2A-212ENST00000578845 A0A0U1RQV1 116 aa13.09□□□□□ -0.31
CDKN2A-212ENST00000578845 IGLV7-46A0A075B6I9 117 aa13.08□□□□□ -0.32
CDKN2A-212ENST00000578845 ETDCA0A1B0GVM5 59 aa13.07□□□□□ -0.32
CDKN2A-212ENST00000578845 SMCR5Q8TEV8 140 aa13.07□□□□□ -0.32
CDKN2A-212ENST00000578845 HSPB8Q9UJY1 196 aa13.06□□□□□ -0.32
CDKN2A-212ENST00000578845 TRBV10-2A0A0K0K1G8 114 aa13.05□□□□□ -0.32
CDKN2A-212ENST00000578845 J3QQQ9 107 aa13.05□□□□□ -0.32
CDKN2A-212ENST00000578845 DPM2O94777 84 aa13.04□□□□□ -0.32
CDKN2A-212ENST00000578845 NMUP48645 174 aa13.04□□□□□ -0.32
CDKN2A-212ENST00000578845 LINC00483Q53H64 154 aa13.04□□□□□ -0.32
CDKN2A-212ENST00000578845 DAND5Q8N907 189 aa13.04□□□□□ -0.32
CDKN2A-212ENST00000578845 S100A12P80511 92 aa13.03□□□□□ -0.32
CDKN2A-212ENST00000578845 CDIP1Q9H305 208 aa13.03□□□□□ -0.32
CDKN2A-212ENST00000578845 B5MCH6 92 aa13.02□□□□□ -0.33
CDKN2A-212ENST00000578845 HERVK_113P61574 105 aa13.02□□□□□ -0.33
CDKN2A-212ENST00000578845 IGKCP01834 107 aa13.01□□□□□ -0.33
CDKN2A-212ENST00000578845 DDTP30046 118 aa13.01□□□□□ -0.33
CDKN2A-212ENST00000578845 COA6Q5JTJ3 125 aaKnown RBP13.01□□□□□ -0.33
CDKN2A-212ENST00000578845 FABP4P15090 132 aa13□□□□□ -0.33
CDKN2A-212ENST00000578845 FP248Q71RG6 208 aaPredicted RBP13□□□□□ -0.33
CDKN2A-212ENST00000578845 Q8NBF4 154 aa13□□□□□ -0.33
CDKN2A-212ENST00000578845 PPDPFQ9H3Y8 114 aa13□□□□□ -0.33
CDKN2A-212ENST00000578845 SPANXB1Q9NS25 103 aaPredicted RBP13□□□□□ -0.33
CDKN2A-212ENST00000578845 C4orf48Q5BLP8 95 aa12.99□□□□□ -0.33
CDKN2A-212ENST00000578845 PMCHL2Q9BQD1 86 aa12.99□□□□□ -0.33
CDKN2A-212ENST00000578845 NDUFC2O95298 119 aa12.98□□□□□ -0.33
CDKN2A-212ENST00000578845 S100A6P06703 90 aa12.98□□□□□ -0.33
CDKN2A-212ENST00000578845 LGALS3P17931 250 aaKnown RBP12.98□□□□□ -0.33
CDKN2A-212ENST00000578845 IGLV6-57P01721 117 aa12.96□□□□□ -0.33
CDKN2A-212ENST00000578845 Q6ZRX8 168 aa12.96□□□□□ -0.33
CDKN2A-212ENST00000578845 Q9BRP9 147 aa12.96□□□□□ -0.33
CDKN2A-212ENST00000578845 MIEN1Q9BRT3 115 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms