RNA–Protein interactions for RNA: ENST00000568205.1

SPG7-218, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-218ENST00000568205 RYR1P21817 5038 aa9.9□□□□□ -0.82
SPG7-218ENST00000568205 SERTAD4-AS1Q5TG53 156 aa9.89□□□□□ -0.83
SPG7-218ENST00000568205 KRTAP7-1Q8IUC3 87 aa9.89□□□□□ -0.83
SPG7-218ENST00000568205 TMEM238C9JI98 176 aa9.88□□□□□ -0.83
SPG7-218ENST00000568205 C14orf144Q96I85 54 aa9.88□□□□□ -0.83
SPG7-218ENST00000568205 TP73-AS1Q9UF72 201 aa9.88□□□□□ -0.83
SPG7-218ENST00000568205 PLA2G2DQ9UNK4 145 aa9.88□□□□□ -0.83
SPG7-218ENST00000568205 HSPG2P98160 4391 aa9.87□□□□□ -0.83
SPG7-218ENST00000568205 DLEU1O43261 78 aa9.87□□□□□ -0.83
SPG7-218ENST00000568205 SMIM6P0DI80 62 aa9.87□□□□□ -0.83
SPG7-218ENST00000568205 S100A12P80511 92 aa9.87□□□□□ -0.83
SPG7-218ENST00000568205 LOC107984156A0A0G2JMH3 177 aa9.86□□□□□ -0.83
SPG7-218ENST00000568205 M0QXV9 152 aa9.86□□□□□ -0.83
SPG7-218ENST00000568205 ARL17AQ8IVW1 177 aa9.86□□□□□ -0.83
SPG7-218ENST00000568205 IGLV5-37A0A075B6J1 123 aa9.85□□□□□ -0.83
SPG7-218ENST00000568205 SMR3BP02814 79 aaPredicted RBP9.85□□□□□ -0.83
SPG7-218ENST00000568205 VPREB1P12018 145 aa9.85□□□□□ -0.83
SPG7-218ENST00000568205 NPC2P61916 151 aa9.85□□□□□ -0.83
SPG7-218ENST00000568205 RPL24P83731 157 aaKnown RBP9.85□□□□□ -0.83
SPG7-218ENST00000568205 SLC25A34Q6PIV7 304 aa9.85□□□□□ -0.83
SPG7-218ENST00000568205 SOSTDC1Q6X4U4 206 aa9.85□□□□□ -0.83
SPG7-218ENST00000568205 Q8NDZ9 215 aa9.85□□□□□ -0.83
SPG7-218ENST00000568205 MIEN1Q9BRT3 115 aa9.85□□□□□ -0.83
SPG7-218ENST00000568205 SPANXDQ9BXN6 97 aa9.85□□□□□ -0.83
SPG7-218ENST00000568205 SPANXCQ9NY87 97 aa9.85□□□□□ -0.83
SPG7-218ENST00000568205 PHF5AQ7RTV0 110 aaKnown RBP9.84□□□□□ -0.83
SPG7-218ENST00000568205 LINC00308Q8TCZ7 52 aa9.84□□□□□ -0.83
SPG7-218ENST00000568205 C22orf24Q9Y442 160 aa9.84□□□□□ -0.83
SPG7-218ENST00000568205 EIF4EBP3O60516 100 aaPredicted RBP9.83□□□□□ -0.84
SPG7-218ENST00000568205 LINC00528Q8N1L1 170 aa9.83□□□□□ -0.84
SPG7-218ENST00000568205 NKAPP1Q8N9T2 125 aa9.83□□□□□ -0.84
SPG7-218ENST00000568205 Q6ZVH6 145 aa9.82□□□□□ -0.84
SPG7-218ENST00000568205 C7orf33Q8WU49 177 aa9.82□□□□□ -0.84
SPG7-218ENST00000568205 LBHQ53QV2 105 aaPredicted RBP9.81□□□□□ -0.84
SPG7-218ENST00000568205 MRPL55Q7Z7F7 128 aaKnown RBP9.81□□□□□ -0.84
SPG7-218ENST00000568205 SPANXB1Q9NS25 103 aaPredicted RBP9.81□□□□□ -0.84
SPG7-218ENST00000568205 IFITM1P13164 125 aa9.8□□□□□ -0.84
SPG7-218ENST00000568205 COPS9Q8WXC6 57 aa9.8□□□□□ -0.84
SPG7-218ENST00000568205 FAT1Q14517 4588 aa9.79□□□□□ -0.84
SPG7-218ENST00000568205 GAGE10A6NGK3 116 aa9.79□□□□□ -0.84
SPG7-218ENST00000568205 NDUFC2O95298 119 aa9.79□□□□□ -0.84
SPG7-218ENST00000568205 PRR3P79522 188 aaKnown RBP9.79□□□□□ -0.84
SPG7-218ENST00000568205 SRSF9Q13242 221 aaKnown RBP eCLIP9.79□□□□□ -0.84
SPG7-218ENST00000568205 HIGD1BQ9P298 99 aa9.79□□□□□ -0.84
SPG7-218ENST00000568205 NCR3O14931 201 aa9.78□□□□□ -0.84
SPG7-218ENST00000568205 UBE2BP63146 152 aa9.78□□□□□ -0.84
SPG7-218ENST00000568205 C2orf91Q6ZV80 131 aa9.78□□□□□ -0.84
SPG7-218ENST00000568205 MUSTN1Q8IVN3 82 aa9.78□□□□□ -0.84
SPG7-218ENST00000568205 Q8N1X5 172 aa9.78□□□□□ -0.84
SPG7-218ENST00000568205 LINC00167Q96N53 147 aa9.78□□□□□ -0.84
SPG7-218ENST00000568205 PPDPFQ9H3Y8 114 aa9.78□□□□□ -0.84
SPG7-218ENST00000568205 HERC2O95714 4834 aa9.77□□□□□ -0.84
SPG7-218ENST00000568205 M0R378 163 aa9.77□□□□□ -0.85
SPG7-218ENST00000568205 KRTAP17-1Q9BYP8 105 aa9.77□□□□□ -0.85
SPG7-218ENST00000568205 UQCR10Q9UDW1 63 aa9.77□□□□□ -0.85
SPG7-218ENST00000568205 FAM229AH3BQW9 127 aa9.76□□□□□ -0.85
SPG7-218ENST00000568205 KRTAP11-1Q8IUC1 163 aa9.76□□□□□ -0.85
SPG7-218ENST00000568205 HIST1H4GQ99525 98 aa9.76□□□□□ -0.85
SPG7-218ENST00000568205 TRBV10-2A0A0K0K1G8 114 aa9.75□□□□□ -0.85
SPG7-218ENST00000568205 RPL37AP61513 92 aaKnown RBP9.75□□□□□ -0.85
SPG7-218ENST00000568205 Q5VSD8 79 aa9.75□□□□□ -0.85
SPG7-218ENST00000568205 C12orf57Q99622 126 aa9.75□□□□□ -0.85
SPG7-218ENST00000568205 RPL37AP8A6NKH3 93 aa9.74□□□□□ -0.85
SPG7-218ENST00000568205 PRO1933Q9H354 126 aa9.74□□□□□ -0.85
SPG7-218ENST00000568205 PSORS1C2Q9UIG4 136 aa9.74□□□□□ -0.85
SPG7-218ENST00000568205 IGKV2-28A0A075B6P5 120 aa9.73□□□□□ -0.85
SPG7-218ENST00000568205 IGKV2D-28P01615 120 aa9.73□□□□□ -0.85
SPG7-218ENST00000568205 PLA2G1BP04054 148 aaKnown RBP9.73□□□□□ -0.85
SPG7-218ENST00000568205 IGLV1-50A0A075B6I6 118 aa9.72□□□□□ -0.85
SPG7-218ENST00000568205 TRBV10-3A0A0K0K1G6 114 aa9.71□□□□□ -0.86
SPG7-218ENST00000568205 KRTAP10-4P60372 401 aaPredicted RBP9.71□□□□□ -0.86
SPG7-218ENST00000568205 LINC00518Q8N0U6 118 aa9.71□□□□□ -0.86
SPG7-218ENST00000568205 DDTP30046 118 aa9.7□□□□□ -0.86
SPG7-218ENST00000568205 TAL2Q16559 108 aa9.7□□□□□ -0.86
SPG7-218ENST00000568205 S100A7L2Q5SY68 101 aa9.7□□□□□ -0.86
SPG7-218ENST00000568205 A4D1N5 150 aa9.69□□□□□ -0.86
SPG7-218ENST00000568205 IGLV6-57P01721 117 aa9.69□□□□□ -0.86
SPG7-218ENST00000568205 HNRNPA3P51991 378 aaKnown RBP9.69□□□□□ -0.86
SPG7-218ENST00000568205 C1orf137Q5JT78 98 aa9.69□□□□□ -0.86
SPG7-218ENST00000568205 LINC00337Q8N6G1 96 aa9.69□□□□□ -0.86
SPG7-218ENST00000568205 VPS13BQ7Z7G8 4022 aa9.69□□□□□ -0.86
SPG7-218ENST00000568205 PRYO14603 147 aa9.67□□□□□ -0.86
SPG7-218ENST00000568205 HSD52Q0P140 79 aa9.67□□□□□ -0.86
SPG7-218ENST00000568205 OR13C6PQ8NH95 151 aa9.67□□□□□ -0.86
SPG7-218ENST00000568205 TMEM126AQ9H061 195 aa9.67□□□□□ -0.86
SPG7-218ENST00000568205 KCNQ1DNQ9H478 68 aa9.67□□□□□ -0.86
SPG7-218ENST00000568205 TSTD3H0UI37 97 aa9.66□□□□□ -0.86
SPG7-218ENST00000568205 BCE1O60756 84 aa9.66□□□□□ -0.86
SPG7-218ENST00000568205 REG3GQ6UW15 175 aa9.66□□□□□ -0.86
SPG7-218ENST00000568205 CEND1Q8N111 149 aa9.66□□□□□ -0.86
SPG7-218ENST00000568205 SRRM2Q9UQ35 2752 aaKnown RBP9.65□□□□□ -0.86
SPG7-218ENST00000568205 KRTAP4-5Q9BYR2 181 aa9.65□□□□□ -0.86
SPG7-218ENST00000568205 TRAV13-2A0A0B4J235 113 aa9.64□□□□□ -0.87
SPG7-218ENST00000568205 A6NDN8 102 aa9.64□□□□□ -0.87
SPG7-218ENST00000568205 IGLV7-43P04211 117 aa9.64□□□□□ -0.87
SPG7-218ENST00000568205 TRAV23DV6A0A075B6W5 121 aa9.63□□□□□ -0.87
SPG7-218ENST00000568205 FXYD2P54710 66 aa9.63□□□□□ -0.87
SPG7-218ENST00000568205 CBY1Q9Y3M2 126 aa9.63□□□□□ -0.87
SPG7-218ENST00000568205 SPRR1AP35321 89 aa9.62□□□□□ -0.87
SPG7-218ENST00000568205 TMEM238LA0A1B0GVL6 79 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms