RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 KIAA0087Q14695 138 aa11.34□□□□□ -0.59
LINC01238-205ENST00000567549 FAM168BA1KXE4 195 aa11.33□□□□□ -0.6
LINC01238-205ENST00000567549 HERVK_113P63121 156 aa11.33□□□□□ -0.6
LINC01238-205ENST00000567549 C6orf226Q5I0X4 101 aa11.33□□□□□ -0.6
LINC01238-205ENST00000567549 LRP2P98164 4655 aa11.33□□□□□ -0.6
LINC01238-205ENST00000567549 Q8IZM0 81 aa11.32□□□□□ -0.6
LINC01238-205ENST00000567549 MIEN1Q9BRT3 115 aa11.32□□□□□ -0.6
LINC01238-205ENST00000567549 IGLC3P0DOY3 106 aa11.31□□□□□ -0.6
LINC01238-205ENST00000567549 LBHQ53QV2 105 aaPredicted RBP11.31□□□□□ -0.6
LINC01238-205ENST00000567549 TOMM7Q9P0U1 55 aa11.31□□□□□ -0.6
LINC01238-205ENST00000567549 UQCR10Q9UDW1 63 aa11.31□□□□□ -0.6
LINC01238-205ENST00000567549 CXCL5P42830 114 aa11.3□□□□□ -0.6
LINC01238-205ENST00000567549 ZC2HC1BQ5TFG8 222 aa11.3□□□□□ -0.6
LINC01238-205ENST00000567549 C2orf82Q6UX34 121 aa11.3□□□□□ -0.6
LINC01238-205ENST00000567549 GEMIN7Q9H840 131 aaKnown RBP11.3□□□□□ -0.6
LINC01238-205ENST00000567549 DDTP30046 118 aa11.29□□□□□ -0.6
LINC01238-205ENST00000567549 FAM19A3Q7Z5A8 133 aa11.29□□□□□ -0.6
LINC01238-205ENST00000567549 PRR26Q8N8Z3 221 aa11.29□□□□□ -0.6
LINC01238-205ENST00000567549 HERVK_113P61574 105 aa11.28□□□□□ -0.6
LINC01238-205ENST00000567549 TINCRA0A1B0GVN0 87 aa11.27□□□□□ -0.61
LINC01238-205ENST00000567549 C11orf86A6NJI1 115 aa11.27□□□□□ -0.61
LINC01238-205ENST00000567549 COX8AP10176 69 aa11.27□□□□□ -0.61
LINC01238-205ENST00000567549 ANKRD39Q53RE8 183 aa11.27□□□□□ -0.61
LINC01238-205ENST00000567549 SLC25A34Q6PIV7 304 aa11.27□□□□□ -0.61
LINC01238-205ENST00000567549 C14orf144Q96I85 54 aa11.27□□□□□ -0.61
LINC01238-205ENST00000567549 DLEU1O43261 78 aa11.25□□□□□ -0.61
LINC01238-205ENST00000567549 C9orf129Q5T035 196 aaKnown RBP11.25□□□□□ -0.61
LINC01238-205ENST00000567549 TMEM170BQ5T4T1 132 aa11.25□□□□□ -0.61
LINC01238-205ENST00000567549 E9PLD3 99 aa11.24□□□□□ -0.61
LINC01238-205ENST00000567549 ZNF861PO60384 105 aa11.23□□□□□ -0.61
LINC01238-205ENST00000567549 NMUP48645 174 aa11.23□□□□□ -0.61
LINC01238-205ENST00000567549 TP73-AS1Q9UF72 201 aa11.23□□□□□ -0.61
LINC01238-205ENST00000567549 RNF213Q63HN8 5207 aa11.22□□□□□ -0.61
LINC01238-205ENST00000567549 H3BRM9 83 aa11.21□□□□□ -0.61
LINC01238-205ENST00000567549 ZNF22P17026 224 aaPredicted RBP11.21□□□□□ -0.61
LINC01238-205ENST00000567549 KRTAP11-1Q8IUC1 163 aa11.21□□□□□ -0.61
LINC01238-205ENST00000567549 BOD1L2Q8IYS8 172 aa11.21□□□□□ -0.61
LINC01238-205ENST00000567549 LINC00469Q8N7U9 141 aa11.21□□□□□ -0.61
LINC01238-205ENST00000567549 CDKN2A-AS1Q9UH64 79 aa11.21□□□□□ -0.61
LINC01238-205ENST00000567549 C22orf24Q9Y442 160 aa11.21□□□□□ -0.61
LINC01238-205ENST00000567549 TMEM223A0PJW6 202 aa11.2□□□□□ -0.62
LINC01238-205ENST00000567549 RPL28P46779 137 aaKnown RBP11.2□□□□□ -0.62
LINC01238-205ENST00000567549 KRTAP7-1Q8IUC3 87 aa11.2□□□□□ -0.62
LINC01238-205ENST00000567549 IGLV5-45A0A087WSX0 123 aa11.19□□□□□ -0.62
LINC01238-205ENST00000567549 LINC00587B1AMM8 73 aa11.19□□□□□ -0.62
LINC01238-205ENST00000567549 KRTAP1-4P0C5Y4 121 aa11.19□□□□□ -0.62
LINC01238-205ENST00000567549 MRPL55Q7Z7F7 128 aaKnown RBP11.19□□□□□ -0.62
LINC01238-205ENST00000567549 XAGE1AQ9HD64 81 aa11.19□□□□□ -0.62
LINC01238-205ENST00000567549 IGKV2D-26A0A0A0MRZ7 120 aa11.18□□□□□ -0.62
LINC01238-205ENST00000567549 LEPROTO15243 131 aa11.18□□□□□ -0.62
LINC01238-205ENST00000567549 PLEKHB2Q96CS7 222 aa11.18□□□□□ -0.62
LINC01238-205ENST00000567549 PCP2Q8IVA1 136 aa11.17□□□□□ -0.62
LINC01238-205ENST00000567549 COX7B2Q8TF08 81 aa11.16□□□□□ -0.62
LINC01238-205ENST00000567549 MYMXA0A1B0GTQ4 84 aa11.14□□□□□ -0.63
LINC01238-205ENST00000567549 SMIM1B2RUZ4 78 aa11.14□□□□□ -0.63
LINC01238-205ENST00000567549 J3QQQ9 107 aa11.14□□□□□ -0.63
LINC01238-205ENST00000567549 BCE1O60756 84 aa11.14□□□□□ -0.63
LINC01238-205ENST00000567549 LGALS3P17931 250 aaKnown RBP11.14□□□□□ -0.63
LINC01238-205ENST00000567549 CTAG1AP78358 180 aa11.14□□□□□ -0.63
LINC01238-205ENST00000567549 PRR4Q16378 134 aa11.14□□□□□ -0.63
LINC01238-205ENST00000567549 HIGD1BQ9P298 99 aa11.14□□□□□ -0.63
LINC01238-205ENST00000567549 NKAPP1Q8N9T2 125 aa11.13□□□□□ -0.63
LINC01238-205ENST00000567549 M0R143 59 aa11.12□□□□□ -0.63
LINC01238-205ENST00000567549 ZNF815PA8K554 130 aa11.11□□□□□ -0.63
LINC01238-205ENST00000567549 CRYGAP11844 174 aa11.11□□□□□ -0.63
LINC01238-205ENST00000567549 SPINK8P0C7L1 97 aa11.1□□□□□ -0.63
LINC01238-205ENST00000567549 C2orf91Q6ZV80 131 aa11.1□□□□□ -0.63
LINC01238-205ENST00000567549 IGLV5-39A0A0G2JS06 123 aa11.09□□□□□ -0.63
LINC01238-205ENST00000567549 TTTY13Q9BZ97 58 aa11.09□□□□□ -0.63
LINC01238-205ENST00000567549 A0A0U1RQV1 116 aa11.08□□□□□ -0.64
LINC01238-205ENST00000567549 UBE2AP49459 152 aa11.08□□□□□ -0.64
LINC01238-205ENST00000567549 SFTA2Q6UW10 78 aa11.08□□□□□ -0.64
LINC01238-205ENST00000567549 IGLV5-37A0A075B6J1 123 aa11.07□□□□□ -0.64
LINC01238-205ENST00000567549 HSD52Q0P140 79 aa11.07□□□□□ -0.64
LINC01238-205ENST00000567549 SCGB1D4Q6XE38 83 aa11.07□□□□□ -0.64
LINC01238-205ENST00000567549 TYMSOSQ8TAI1 123 aa11.07□□□□□ -0.64
LINC01238-205ENST00000567549 LINC00167Q96N53 147 aa11.07□□□□□ -0.64
LINC01238-205ENST00000567549 TSPEAR-AS2P59090 65 aa11.06□□□□□ -0.64
LINC01238-205ENST00000567549 TAL2Q16559 108 aa11.06□□□□□ -0.64
LINC01238-205ENST00000567549 RPL37AP8A6NKH3 93 aa11.05□□□□□ -0.64
LINC01238-205ENST00000567549 NDUFA12Q9UI09 145 aa11.05□□□□□ -0.64
LINC01238-205ENST00000567549 SNHG12Q9BXW3 62 aa11.04□□□□□ -0.64
LINC01238-205ENST00000567549 RPL24P83731 157 aaKnown RBP11.03□□□□□ -0.64
LINC01238-205ENST00000567549 COX17Q14061 63 aa11.03□□□□□ -0.64
LINC01238-205ENST00000567549 GAGE10A6NGK3 116 aa11.02□□□□□ -0.65
LINC01238-205ENST00000567549 HINT1P49773 126 aaPredicted RBP11.02□□□□□ -0.65
LINC01238-205ENST00000567549 TSPAN13O95857 204 aa11.01□□□□□ -0.65
LINC01238-205ENST00000567549 HERV-K104P63124 156 aa11.01□□□□□ -0.65
LINC01238-205ENST00000567549 FAM229BQ4G0N7 80 aa11.01□□□□□ -0.65
LINC01238-205ENST00000567549 BVES-AS1Q5T3Y7 98 aa11.01□□□□□ -0.65
LINC01238-205ENST00000567549 HIST1H4GQ99525 98 aa11.01□□□□□ -0.65
LINC01238-205ENST00000567549 BATFQ16520 125 aa11□□□□□ -0.65
LINC01238-205ENST00000567549 SPANXB1Q9NS25 103 aaPredicted RBP11□□□□□ -0.65
LINC01238-205ENST00000567549 A0A0J9YXY3 114 aa10.99□□□□□ -0.65
LINC01238-205ENST00000567549 TIMM17BO60830 172 aa10.99□□□□□ -0.65
LINC01238-205ENST00000567549 PFN2P35080 140 aa10.99□□□□□ -0.65
LINC01238-205ENST00000567549 COL5A1-AS1Q5SY13 56 aa10.99□□□□□ -0.65
LINC01238-205ENST00000567549 TMEM238C9JI98 176 aa10.98□□□□□ -0.65
LINC01238-205ENST00000567549 CEND1Q8N111 149 aa10.98□□□□□ -0.65
LINC01238-205ENST00000567549 ERG28Q9UKR5 140 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms