RNA–Protein interactions for RNA: ENST00000565582.5

FANCA-218, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-218ENST00000565582 A0A0U1RRA0 63 aa6.93□□□□□ -1.3
FANCA-218ENST00000565582 FAM229BQ4G0N7 80 aa6.93□□□□□ -1.3
FANCA-218ENST00000565582 IGKV2D-26A0A0A0MRZ7 120 aa6.92□□□□□ -1.3
FANCA-218ENST00000565582 RPL24P83731 157 aaKnown RBP6.92□□□□□ -1.3
FANCA-218ENST00000565582 FAT4Q6V0I7 4981 aa6.91□□□□□ -1.3
FANCA-218ENST00000565582 LINC00158P58513 81 aa6.91□□□□□ -1.3
FANCA-218ENST00000565582 COX17Q14061 63 aa6.91□□□□□ -1.3
FANCA-218ENST00000565582 C3orf22Q8N5N4 141 aa6.91□□□□□ -1.3
FANCA-218ENST00000565582 HIGD2AQ9BW72 106 aa6.91□□□□□ -1.3
FANCA-218ENST00000565582 CHTOPQ9Y3Y2 248 aaKnown RBP6.91□□□□□ -1.3
FANCA-218ENST00000565582 APOC3P02656 99 aa6.9□□□□□ -1.3
FANCA-218ENST00000565582 CBLN2Q8IUK8 224 aa6.9□□□□□ -1.3
FANCA-218ENST00000565582 MUC17Q685J3 4493 aa6.9□□□□□ -1.31
FANCA-218ENST00000565582 PLEKHB2Q96CS7 222 aa6.89□□□□□ -1.31
FANCA-218ENST00000565582 TMEM223A0PJW6 202 aa6.88□□□□□ -1.31
FANCA-218ENST00000565582 NCR3O14931 201 aa6.88□□□□□ -1.31
FANCA-218ENST00000565582 SMIM13P0DJ93 91 aa6.88□□□□□ -1.31
FANCA-218ENST00000565582 SFTA2Q6UW10 78 aa6.87□□□□□ -1.31
FANCA-218ENST00000565582 IGLV7-46A0A075B6I9 117 aa6.86□□□□□ -1.31
FANCA-218ENST00000565582 IFI27L1Q96BM0 104 aa6.86□□□□□ -1.31
FANCA-218ENST00000565582 SPRR4Q96PI1 79 aa6.86□□□□□ -1.31
FANCA-218ENST00000565582 TRAV12-1A0A0B4J245 112 aa6.85□□□□□ -1.31
FANCA-218ENST00000565582 A0A0U1RQV1 116 aa6.85□□□□□ -1.31
FANCA-218ENST00000565582 SNAPINO95295 136 aa6.85□□□□□ -1.31
FANCA-218ENST00000565582 MEIG1Q5JSS6 88 aa6.85□□□□□ -1.31
FANCA-218ENST00000565582 BOD1L2Q8IYS8 172 aa6.85□□□□□ -1.31
FANCA-218ENST00000565582 YPEL4Q96NS1 127 aa6.85□□□□□ -1.31
FANCA-218ENST00000565582 CDIP1Q9H305 208 aa6.85□□□□□ -1.31
FANCA-218ENST00000565582 H0Y8G0 127 aa6.84□□□□□ -1.31
FANCA-218ENST00000565582 CTAG1AP78358 180 aa6.84□□□□□ -1.31
FANCA-218ENST00000565582 TPRXLQ17RH7 258 aa6.84□□□□□ -1.31
FANCA-218ENST00000565582 SVBPQ8N300 66 aa6.84□□□□□ -1.31
FANCA-218ENST00000565582 FAM19A2Q8N3H0 131 aa6.84□□□□□ -1.31
FANCA-218ENST00000565582 MIR7-3HGQ8N6C7 128 aa6.84□□□□□ -1.31
FANCA-218ENST00000565582 CHCHD1Q96BP2 118 aaKnown RBP6.84□□□□□ -1.31
FANCA-218ENST00000565582 PRYO14603 147 aa6.83□□□□□ -1.32
FANCA-218ENST00000565582 C4orf48Q5BLP8 95 aa6.83□□□□□ -1.32
FANCA-218ENST00000565582 DAND5Q8N907 189 aa6.83□□□□□ -1.32
FANCA-218ENST00000565582 PPDPFQ9H3Y8 114 aa6.83□□□□□ -1.32
FANCA-218ENST00000565582 LOC105371267A0A1B0GV96 52 aa6.82□□□□□ -1.32
FANCA-218ENST00000565582 TSPEAR-AS2P59090 65 aa6.82□□□□□ -1.32
FANCA-218ENST00000565582 NDUFA12Q9UI09 145 aa6.82□□□□□ -1.32
FANCA-218ENST00000565582 TRBV10-3A0A0K0K1G6 114 aa6.81□□□□□ -1.32
FANCA-218ENST00000565582 HSBP1O75506 76 aa6.81□□□□□ -1.32
FANCA-218ENST00000565582 Q8NBF4 154 aa6.81□□□□□ -1.32
FANCA-218ENST00000565582 ZNF706Q9Y5V0 76 aaPredicted RBP6.81□□□□□ -1.32
FANCA-218ENST00000565582 ETDCA0A1B0GVM5 59 aa6.8□□□□□ -1.32
FANCA-218ENST00000565582 SPRR1AP35321 89 aa6.8□□□□□ -1.32
FANCA-218ENST00000565582 SLC7A5P1Q8MH63 180 aa6.8□□□□□ -1.32
FANCA-218ENST00000565582 LINC00337Q8N6G1 96 aa6.8□□□□□ -1.32
FANCA-218ENST00000565582 SMCR5Q8TEV8 140 aa6.8□□□□□ -1.32
FANCA-218ENST00000565582 KRTAP4-16G5E9R7 235 aaPredicted RBP6.79□□□□□ -1.32
FANCA-218ENST00000565582 HERV-K104P63124 156 aa6.79□□□□□ -1.32
FANCA-218ENST00000565582 LCE2AQ5TA79 106 aaPredicted RBP6.79□□□□□ -1.32
FANCA-218ENST00000565582 KCNQ1DNQ9H478 68 aa6.79□□□□□ -1.32
FANCA-218ENST00000565582 MYMXA0A1B0GTQ4 84 aa6.78□□□□□ -1.32
FANCA-218ENST00000565582 LINC00310P59036 64 aa6.78□□□□□ -1.32
FANCA-218ENST00000565582 PMCHL2Q9BQD1 86 aa6.78□□□□□ -1.32
FANCA-218ENST00000565582 ERC2-IT1O76042 136 aa6.77□□□□□ -1.33
FANCA-218ENST00000565582 TRGC2P03986 189 aa6.77□□□□□ -1.33
FANCA-218ENST00000565582 S100A12P80511 92 aa6.77□□□□□ -1.33
FANCA-218ENST00000565582 SPAG11AQ6PDA7 123 aa6.77□□□□□ -1.33
FANCA-218ENST00000565582 KRTAP9-2Q9BYQ4 174 aa6.77□□□□□ -1.33
FANCA-218ENST00000565582 SERF1AO75920 110 aa6.76□□□□□ -1.33
FANCA-218ENST00000565582 GAGE2AQ6NT46 116 aa6.76□□□□□ -1.33
FANCA-218ENST00000565582 MAP1LC3CQ9BXW4 147 aa6.76□□□□□ -1.33
FANCA-218ENST00000565582 IGLV9-49A0A0B4J1Y8 123 aa6.75□□□□□ -1.33
FANCA-218ENST00000565582 B5MCH6 92 aa6.75□□□□□ -1.33
FANCA-218ENST00000565582 LEPROTO15243 131 aa6.75□□□□□ -1.33
FANCA-218ENST00000565582 LEPROTL1O95214 131 aa6.75□□□□□ -1.33
FANCA-218ENST00000565582 DDTP30046 118 aa6.75□□□□□ -1.33
FANCA-218ENST00000565582 MOBPQ13875 183 aa6.75□□□□□ -1.33
FANCA-218ENST00000565582 LINC00483Q53H64 154 aa6.75□□□□□ -1.33
FANCA-218ENST00000565582 LINC00587B1AMM8 73 aa6.74□□□□□ -1.33
FANCA-218ENST00000565582 J3QQQ9 107 aa6.74□□□□□ -1.33
FANCA-218ENST00000565582 FABP4P15090 132 aa6.74□□□□□ -1.33
FANCA-218ENST00000565582 KRTAP13-3Q3SY46 172 aa6.74□□□□□ -1.33
FANCA-218ENST00000565582 FP248Q71RG6 208 aaPredicted RBP6.74□□□□□ -1.33
FANCA-218ENST00000565582 Q9BRP9 147 aa6.74□□□□□ -1.33
FANCA-218ENST00000565582 PLNP26678 52 aa6.73□□□□□ -1.33
FANCA-218ENST00000565582 NPC2P61916 151 aa6.73□□□□□ -1.33
FANCA-218ENST00000565582 EIF4EBP3O60516 100 aaPredicted RBP6.72□□□□□ -1.33
FANCA-218ENST00000565582 DPM2O94777 84 aa6.72□□□□□ -1.33
FANCA-218ENST00000565582 SPANXB1Q9NS25 103 aaPredicted RBP6.72□□□□□ -1.33
FANCA-218ENST00000565582 TRBV10-2A0A0K0K1G8 114 aa6.71□□□□□ -1.34
FANCA-218ENST00000565582 SPINK1P00995 79 aa6.71□□□□□ -1.34
FANCA-218ENST00000565582 LGALS3P17931 250 aaKnown RBP6.71□□□□□ -1.34
FANCA-218ENST00000565582 HERVK_113P61574 105 aa6.71□□□□□ -1.34
FANCA-218ENST00000565582 SOSTDC1Q6X4U4 206 aa6.71□□□□□ -1.34
FANCA-218ENST00000565582 Q6ZRX8 168 aa6.71□□□□□ -1.34
FANCA-218ENST00000565582 MIEN1Q9BRT3 115 aa6.71□□□□□ -1.34
FANCA-218ENST00000565582 TMA7Q9Y2S6 64 aaKnown RBP6.71□□□□□ -1.34
FANCA-218ENST00000565582 LOC107984156A0A0G2JMH3 177 aa6.7□□□□□ -1.34
FANCA-218ENST00000565582 A6NJY4 79 aa6.7□□□□□ -1.34
FANCA-218ENST00000565582 IGKCP01834 107 aa6.7□□□□□ -1.34
FANCA-218ENST00000565582 S100A7L2Q5SY68 101 aa6.7□□□□□ -1.34
FANCA-218ENST00000565582 ARL17AQ8IVW1 177 aa6.7□□□□□ -1.34
FANCA-218ENST00000565582 KRTAP3-3Q9BYR6 98 aa6.7□□□□□ -1.34
FANCA-218ENST00000565582 KRTAP3-2Q9BYR7 98 aa6.7□□□□□ -1.34
FANCA-218ENST00000565582 HSPB8Q9UJY1 196 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms