RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 H7C2G1 150 aa11.9□□□□□ -0.5
COMMD4-208ENST00000563220 TRIAP1O43715 76 aa11.9□□□□□ -0.5
COMMD4-208ENST00000563220 SLC25A20O43772 301 aa11.9□□□□□ -0.5
COMMD4-208ENST00000563220 CARD19Q96LW7 228 aa11.9□□□□□ -0.5
COMMD4-208ENST00000563220 CAMK2N2Q96S95 79 aa11.9□□□□□ -0.5
COMMD4-208ENST00000563220 VPS13DQ5THJ4 4388 aa11.89□□□□□ -0.51
COMMD4-208ENST00000563220 C2orf48Q96LS8 159 aa11.89□□□□□ -0.51
COMMD4-208ENST00000563220 LINC01620Q4KN68 170 aa11.89□□□□□ -0.51
COMMD4-208ENST00000563220 C9JAW5 83 aa11.88□□□□□ -0.51
COMMD4-208ENST00000563220 Q6ZRU5 148 aa11.88□□□□□ -0.51
COMMD4-208ENST00000563220 ANKRD29Q8N6D5 301 aa11.88□□□□□ -0.51
COMMD4-208ENST00000563220 USP17L23D6RBM5 183 aa11.87□□□□□ -0.51
COMMD4-208ENST00000563220 COX6CP09669 75 aa11.87□□□□□ -0.51
COMMD4-208ENST00000563220 SND1-IT1Q9HBX3 110 aa11.87□□□□□ -0.51
COMMD4-208ENST00000563220 TGP01266 2768 aa11.87□□□□□ -0.51
COMMD4-208ENST00000563220 NBDYA0A0U1RRE5 68 aa11.87□□□□□ -0.51
COMMD4-208ENST00000563220 TRBV10-2A0A0K0K1G8 114 aa11.85□□□□□ -0.51
COMMD4-208ENST00000563220 LECT2O14960 151 aa11.85□□□□□ -0.51
COMMD4-208ENST00000563220 WWC2-AS2Q96NR7 200 aa11.85□□□□□ -0.51
COMMD4-208ENST00000563220 CDIP1Q9H305 208 aa11.85□□□□□ -0.51
COMMD4-208ENST00000563220 DNAH10Q8IVF4 4471 aa11.85□□□□□ -0.51
COMMD4-208ENST00000563220 IGKV2-28A0A075B6P5 120 aa11.84□□□□□ -0.51
COMMD4-208ENST00000563220 IGKV2D-28P01615 120 aa11.84□□□□□ -0.51
COMMD4-208ENST00000563220 SLPIP03973 132 aa11.84□□□□□ -0.51
COMMD4-208ENST00000563220 F8WDY8 70 aa11.83□□□□□ -0.52
COMMD4-208ENST00000563220 RPL13AP40429 203 aaKnown RBP11.83□□□□□ -0.52
COMMD4-208ENST00000563220 SYCNQ0VAF6 134 aa11.83□□□□□ -0.52
COMMD4-208ENST00000563220 TTC32Q5I0X7 151 aa11.83□□□□□ -0.52
COMMD4-208ENST00000563220 H3BT86 120 aa11.8□□□□□ -0.52
COMMD4-208ENST00000563220 LST1O00453 97 aa11.8□□□□□ -0.52
COMMD4-208ENST00000563220 LINC00337Q8N6G1 96 aa11.8□□□□□ -0.52
COMMD4-208ENST00000563220 Q8NDZ9 215 aa11.8□□□□□ -0.52
COMMD4-208ENST00000563220 M0R2N4 97 aa11.79□□□□□ -0.52
COMMD4-208ENST00000563220 PSCAO43653 123 aa11.79□□□□□ -0.52
COMMD4-208ENST00000563220 PRR3P79522 188 aaKnown RBP11.78□□□□□ -0.52
COMMD4-208ENST00000563220 TRAV13-2A0A0B4J235 113 aa11.77□□□□□ -0.53
COMMD4-208ENST00000563220 XAGE1AQ9HD64 81 aa11.77□□□□□ -0.53
COMMD4-208ENST00000563220 NDUFC2-KCTD14E9PQ53 114 aa11.76□□□□□ -0.53
COMMD4-208ENST00000563220 NDUFC2O95298 119 aa11.76□□□□□ -0.53
COMMD4-208ENST00000563220 Q6ZRN7 208 aaPredicted RBP11.76□□□□□ -0.53
COMMD4-208ENST00000563220 Q6ZRP5 223 aa11.75□□□□□ -0.53
COMMD4-208ENST00000563220 CLEC2BQ92478 149 aa11.74□□□□□ -0.53
COMMD4-208ENST00000563220 GAGE2EQ4V326 116 aa11.74□□□□□ -0.53
COMMD4-208ENST00000563220 GAGE2DQ9UEU5 116 aa11.74□□□□□ -0.53
COMMD4-208ENST00000563220 Q6ZR54 194 aa11.73□□□□□ -0.53
COMMD4-208ENST00000563220 KMT2AQ03164 3969 aa11.73□□□□□ -0.53
COMMD4-208ENST00000563220 LRCOL1A6NCL2 159 aa11.72□□□□□ -0.53
COMMD4-208ENST00000563220 XGP55808 180 aa11.72□□□□□ -0.53
COMMD4-208ENST00000563220 LY6G6CO95867 125 aa11.71□□□□□ -0.53
COMMD4-208ENST00000563220 TLX1NBP0CAT3 122 aa11.71□□□□□ -0.53
COMMD4-208ENST00000563220 OR13C6PQ8NH95 151 aa11.71□□□□□ -0.53
COMMD4-208ENST00000563220 NCR3O14931 201 aa11.7□□□□□ -0.54
COMMD4-208ENST00000563220 TEX49A0A1B0GTD5 131 aa11.7□□□□□ -0.54
COMMD4-208ENST00000563220 MT-ATP8P03928 68 aa11.7□□□□□ -0.54
COMMD4-208ENST00000563220 C9orf129Q5T035 196 aaKnown RBP11.69□□□□□ -0.54
COMMD4-208ENST00000563220 SMIM11BQ8TCY0 68 aa11.69□□□□□ -0.54
COMMD4-208ENST00000563220 C3orf84H3BNL1 204 aa11.68□□□□□ -0.54
COMMD4-208ENST00000563220 TRACP01848 142 aa11.68□□□□□ -0.54
COMMD4-208ENST00000563220 RPL18AQ02543 176 aaKnown RBP11.68□□□□□ -0.54
COMMD4-208ENST00000563220 LINC00476Q8WZB0 136 aa11.68□□□□□ -0.54
COMMD4-208ENST00000563220 RPL28P46779 137 aaKnown RBP11.68□□□□□ -0.54
COMMD4-208ENST00000563220 CNBPP62633 177 aaKnown RBP11.68□□□□□ -0.54
COMMD4-208ENST00000563220 C14orf177Q52M58 125 aa11.67□□□□□ -0.54
COMMD4-208ENST00000563220 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.66□□□□□ -0.54
COMMD4-208ENST00000563220 VPREB1P12018 145 aa11.66□□□□□ -0.54
COMMD4-208ENST00000563220 DNAH2Q9P225 4427 aa11.65□□□□□ -0.54
COMMD4-208ENST00000563220 FAM240AA0A1B0GVK7 77 aa11.65□□□□□ -0.54
COMMD4-208ENST00000563220 TMEM126AQ9H061 195 aa11.65□□□□□ -0.54
COMMD4-208ENST00000563220 GAGE2BQ13066 116 aa11.63□□□□□ -0.55
COMMD4-208ENST00000563220 LOC107984640A0A0U1RRK4 108 aa11.63□□□□□ -0.55
COMMD4-208ENST00000563220 A0A1B0GV72 72 aa11.63□□□□□ -0.55
COMMD4-208ENST00000563220 S100A7L2Q5SY68 101 aa11.63□□□□□ -0.55
COMMD4-208ENST00000563220 IGLV6-57P01721 117 aa11.61□□□□□ -0.55
COMMD4-208ENST00000563220 ALMS1Q8TCU4 4167 aa11.61□□□□□ -0.55
COMMD4-208ENST00000563220 SERTAD4-AS1Q5TG53 156 aa11.61□□□□□ -0.55
COMMD4-208ENST00000563220 DNAH6Q9C0G6 4158 aa11.6□□□□□ -0.55
COMMD4-208ENST00000563220 Q8N814 137 aa11.6□□□□□ -0.55
COMMD4-208ENST00000563220 A0A087WTM6 91 aa11.59□□□□□ -0.55
COMMD4-208ENST00000563220 TRBV10-3A0A0K0K1G6 114 aa11.59□□□□□ -0.55
COMMD4-208ENST00000563220 C1orf134Q5TEV5 83 aa11.59□□□□□ -0.55
COMMD4-208ENST00000563220 FAM168BA1KXE4 195 aa11.59□□□□□ -0.55
COMMD4-208ENST00000563220 M0R378 163 aa11.59□□□□□ -0.55
COMMD4-208ENST00000563220 FAM218AQ96MZ4 157 aa11.59□□□□□ -0.55
COMMD4-208ENST00000563220 PLA2G2DQ9UNK4 145 aa11.58□□□□□ -0.56
COMMD4-208ENST00000563220 SNCGO76070 127 aa11.57□□□□□ -0.56
COMMD4-208ENST00000563220 KRTAP7-1Q8IUC3 87 aa11.57□□□□□ -0.56
COMMD4-208ENST00000563220 H0YGX0 51 aa11.57□□□□□ -0.56
COMMD4-208ENST00000563220 Q6Q795 121 aa11.57□□□□□ -0.56
COMMD4-208ENST00000563220 C9orf163Q8N9P6 203 aa11.57□□□□□ -0.56
COMMD4-208ENST00000563220 A0A096LNI7 61 aa11.56□□□□□ -0.56
COMMD4-208ENST00000563220 ACYP1P07311 99 aa11.56□□□□□ -0.56
COMMD4-208ENST00000563220 BAALC-AS2P0C853 105 aa11.56□□□□□ -0.56
COMMD4-208ENST00000563220 C16orf90A8MZG2 172 aa11.55□□□□□ -0.56
COMMD4-208ENST00000563220 C6orf99Q4VX62 202 aa11.55□□□□□ -0.56
COMMD4-208ENST00000563220 IGKV2-24A0A0C4DH68 120 aa11.53□□□□□ -0.56
COMMD4-208ENST00000563220 NKAPP1Q8N9T2 125 aa11.53□□□□□ -0.56
COMMD4-208ENST00000563220 C22orf24Q9Y442 160 aa11.53□□□□□ -0.56
COMMD4-208ENST00000563220 IGLV5-37A0A075B6J1 123 aa11.53□□□□□ -0.56
COMMD4-208ENST00000563220 A0A087WYN8 130 aa11.53□□□□□ -0.56
COMMD4-208ENST00000563220 C7orf33Q8WU49 177 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms