RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 NDUFC2-KCTD14E9PQ53 114 aa8.47□□□□□ -1.05
SNX1-211ENST00000560829 VPS13DQ5THJ4 4388 aa8.47□□□□□ -1.05
SNX1-211ENST00000560829 SMCPP49901 116 aaPredicted RBP8.47□□□□□ -1.05
SNX1-211ENST00000560829 LINC01620Q4KN68 170 aa8.47□□□□□ -1.05
SNX1-211ENST00000560829 SMIM11BQ8TCY0 68 aa8.47□□□□□ -1.05
SNX1-211ENST00000560829 MTURNQ8N3F0 131 aa8.46□□□□□ -1.06
SNX1-211ENST00000560829 CLEC2BQ92478 149 aa8.46□□□□□ -1.06
SNX1-211ENST00000560829 LINC01600Q96MT4 127 aa8.46□□□□□ -1.06
SNX1-211ENST00000560829 TMEM126AQ9H061 195 aa8.46□□□□□ -1.06
SNX1-211ENST00000560829 TRBV10-2A0A0K0K1G8 114 aa8.45□□□□□ -1.06
SNX1-211ENST00000560829 M0QXV9 152 aa8.45□□□□□ -1.06
SNX1-211ENST00000560829 PRR3P79522 188 aaKnown RBP8.45□□□□□ -1.06
SNX1-211ENST00000560829 TTC32Q5I0X7 151 aa8.45□□□□□ -1.06
SNX1-211ENST00000560829 OR13C6PQ8NH95 151 aa8.45□□□□□ -1.06
SNX1-211ENST00000560829 CARD19Q96LW7 228 aa8.45□□□□□ -1.06
SNX1-211ENST00000560829 TLX1NBP0CAT3 122 aa8.45□□□□□ -1.06
SNX1-211ENST00000560829 DNAH10Q8IVF4 4471 aa8.44□□□□□ -1.06
SNX1-211ENST00000560829 SLPIP03973 132 aa8.44□□□□□ -1.06
SNX1-211ENST00000560829 XAGE1AQ9HD64 81 aa8.44□□□□□ -1.06
SNX1-211ENST00000560829 C9JAW5 83 aa8.43□□□□□ -1.06
SNX1-211ENST00000560829 SLC25A20O43772 301 aa8.43□□□□□ -1.06
SNX1-211ENST00000560829 OCIAD2Q56VL3 154 aa8.43□□□□□ -1.06
SNX1-211ENST00000560829 Q6ZRP5 223 aa8.43□□□□□ -1.06
SNX1-211ENST00000560829 NBDYA0A0U1RRE5 68 aa8.43□□□□□ -1.06
SNX1-211ENST00000560829 H0YGX0 51 aa8.43□□□□□ -1.06
SNX1-211ENST00000560829 NCR3O14931 201 aa8.42□□□□□ -1.06
SNX1-211ENST00000560829 TRACP01848 142 aa8.42□□□□□ -1.06
SNX1-211ENST00000560829 ETDBQ3ZM63 59 aa8.42□□□□□ -1.06
SNX1-211ENST00000560829 FBN3Q75N90 2809 aa8.42□□□□□ -1.06
SNX1-211ENST00000560829 IGLV6-57P01721 117 aa8.41□□□□□ -1.06
SNX1-211ENST00000560829 VPREB1P12018 145 aa8.41□□□□□ -1.06
SNX1-211ENST00000560829 FAM218AQ96MZ4 157 aa8.4□□□□□ -1.06
SNX1-211ENST00000560829 H3BT86 120 aa8.4□□□□□ -1.07
SNX1-211ENST00000560829 K7ERU9 68 aa8.4□□□□□ -1.07
SNX1-211ENST00000560829 LECT2O14960 151 aa8.4□□□□□ -1.07
SNX1-211ENST00000560829 S100A7L2Q5SY68 101 aa8.4□□□□□ -1.07
SNX1-211ENST00000560829 ANKRD29Q8N6D5 301 aa8.4□□□□□ -1.07
SNX1-211ENST00000560829 PSCAO43653 123 aa8.39□□□□□ -1.07
SNX1-211ENST00000560829 RPL18AQ02543 176 aaKnown RBP8.39□□□□□ -1.07
SNX1-211ENST00000560829 GAGE2EQ4V326 116 aa8.39□□□□□ -1.07
SNX1-211ENST00000560829 TEN1Q86WV5 123 aa8.39□□□□□ -1.07
SNX1-211ENST00000560829 GAGE2DQ9UEU5 116 aa8.39□□□□□ -1.07
SNX1-211ENST00000560829 C9orf129Q5T035 196 aaKnown RBP8.38□□□□□ -1.07
SNX1-211ENST00000560829 CNBPP62633 177 aaKnown RBP8.38□□□□□ -1.07
SNX1-211ENST00000560829 C14orf177Q52M58 125 aa8.37□□□□□ -1.07
SNX1-211ENST00000560829 Q6ZRN7 208 aaPredicted RBP8.37□□□□□ -1.07
SNX1-211ENST00000560829 PLA2G2DQ9UNK4 145 aa8.37□□□□□ -1.07
SNX1-211ENST00000560829 M0R378 163 aa8.36□□□□□ -1.07
SNX1-211ENST00000560829 A0A087WYN8 130 aa8.35□□□□□ -1.07
SNX1-211ENST00000560829 TRBV10-3A0A0K0K1G6 114 aa8.35□□□□□ -1.07
SNX1-211ENST00000560829 LOC107984640A0A0U1RRK4 108 aa8.35□□□□□ -1.07
SNX1-211ENST00000560829 A0A1B0GX51 115 aa8.35□□□□□ -1.07
SNX1-211ENST00000560829 LRCOL1A6NCL2 159 aa8.34□□□□□ -1.07
SNX1-211ENST00000560829 C6orf99Q4VX62 202 aa8.34□□□□□ -1.07
SNX1-211ENST00000560829 TENM2Q9NT68 2774 aa8.34□□□□□ -1.07
SNX1-211ENST00000560829 PPDPFLQ8WWR9 84 aa8.34□□□□□ -1.07
SNX1-211ENST00000560829 IGLV5-37A0A075B6J1 123 aa8.33□□□□□ -1.08
SNX1-211ENST00000560829 TRAV23DV6A0A075B6W5 121 aa8.33□□□□□ -1.08
SNX1-211ENST00000560829 CBY1Q9Y3M2 126 aa8.33□□□□□ -1.08
SNX1-211ENST00000560829 J3QR89 54 aa8.32□□□□□ -1.08
SNX1-211ENST00000560829 SERTAD4-AS1Q5TG53 156 aa8.32□□□□□ -1.08
SNX1-211ENST00000560829 Q6ZR54 194 aa8.32□□□□□ -1.08
SNX1-211ENST00000560829 WWC2-AS2Q96NR7 200 aa8.32□□□□□ -1.08
SNX1-211ENST00000560829 DNAL4O96015 105 aa8.32□□□□□ -1.08
SNX1-211ENST00000560829 LINC00167Q96N53 147 aa8.32□□□□□ -1.08
SNX1-211ENST00000560829 DNAH2Q9P225 4427 aa8.31□□□□□ -1.08
SNX1-211ENST00000560829 TRBV7-6A0A0J9YX20 115 aa8.3□□□□□ -1.08
SNX1-211ENST00000560829 BAALC-AS2P0C853 105 aa8.3□□□□□ -1.08
SNX1-211ENST00000560829 GAGE2BQ13066 116 aa8.3□□□□□ -1.08
SNX1-211ENST00000560829 NKAPP1Q8N9T2 125 aa8.3□□□□□ -1.08
SNX1-211ENST00000560829 DIRC1Q969H9 104 aa8.3□□□□□ -1.08
SNX1-211ENST00000560829 ZNF73O43830 326 aaPredicted RBP8.3□□□□□ -1.08
SNX1-211ENST00000560829 LINC00575Q6W349 94 aa8.3□□□□□ -1.08
SNX1-211ENST00000560829 Q8N814 137 aa8.3□□□□□ -1.08
SNX1-211ENST00000560829 C22orf24Q9Y442 160 aa8.29□□□□□ -1.08
SNX1-211ENST00000560829 DNAH6Q9C0G6 4158 aa8.29□□□□□ -1.08
SNX1-211ENST00000560829 C16orf90A8MZG2 172 aa8.28□□□□□ -1.08
SNX1-211ENST00000560829 M0R2N4 97 aa8.28□□□□□ -1.08
SNX1-211ENST00000560829 KRTAP7-1Q8IUC3 87 aa8.28□□□□□ -1.08
SNX1-211ENST00000560829 C7orf33Q8WU49 177 aa8.28□□□□□ -1.08
SNX1-211ENST00000560829 KMT2AQ03164 3969 aa8.28□□□□□ -1.08
SNX1-211ENST00000560829 TEX49A0A1B0GTD5 131 aa8.28□□□□□ -1.08
SNX1-211ENST00000560829 KCNQ1DNQ9H478 68 aa8.28□□□□□ -1.08
SNX1-211ENST00000560829 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.27□□□□□ -1.09
SNX1-211ENST00000560829 FAM168BA1KXE4 195 aa8.27□□□□□ -1.09
SNX1-211ENST00000560829 SNCGO76070 127 aa8.27□□□□□ -1.09
SNX1-211ENST00000560829 ELOF1P60002 83 aaKnown RBP8.27□□□□□ -1.09
SNX1-211ENST00000560829 C9orf163Q8N9P6 203 aa8.27□□□□□ -1.09
SNX1-211ENST00000560829 PKIGQ9Y2B9 76 aa8.27□□□□□ -1.09
SNX1-211ENST00000560829 ORMDL1Q9P0S3 153 aa8.26□□□□□ -1.09
SNX1-211ENST00000560829 A0A096LNI7 61 aa8.26□□□□□ -1.09
SNX1-211ENST00000560829 COX7BP24311 80 aa8.26□□□□□ -1.09
SNX1-211ENST00000560829 ALMS1Q8TCU4 4167 aa8.25□□□□□ -1.09
SNX1-211ENST00000560829 hADV29S1A0JD25 119 aa8.25□□□□□ -1.09
SNX1-211ENST00000560829 IGLV1-50A0A075B6I6 118 aa8.24□□□□□ -1.09
SNX1-211ENST00000560829 A0A087WTM6 91 aa8.24□□□□□ -1.09
SNX1-211ENST00000560829 LINC00476Q8WZB0 136 aa8.24□□□□□ -1.09
SNX1-211ENST00000560829 C3orf84H3BNL1 204 aa8.23□□□□□ -1.09
SNX1-211ENST00000560829 MRPL55Q7Z7F7 128 aaKnown RBP8.23□□□□□ -1.09
SNX1-211ENST00000560829 PRYO14603 147 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms