RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 PMCHL2Q9BQD1 86 aa4.94□□□□□ -1.62
SNX1-207ENST00000559401 TMA7Q9Y2S6 64 aaKnown RBP4.94□□□□□ -1.62
SNX1-207ENST00000559401 IGLV1-50A0A075B6I6 118 aa4.93□□□□□ -1.62
SNX1-207ENST00000559401 DPM2O94777 84 aa4.93□□□□□ -1.62
SNX1-207ENST00000559401 SMIM13P0DJ93 91 aa4.93□□□□□ -1.62
SNX1-207ENST00000559401 VPREB1P12018 145 aa4.93□□□□□ -1.62
SNX1-207ENST00000559401 PLNP26678 52 aa4.93□□□□□ -1.62
SNX1-207ENST00000559401 HERVK_113P61574 105 aa4.93□□□□□ -1.62
SNX1-207ENST00000559401 NDUFA12Q9UI09 145 aa4.93□□□□□ -1.62
SNX1-207ENST00000559401 HMCN2Q8NDA2 5059 aa4.92□□□□□ -1.62
SNX1-207ENST00000559401 MYMXA0A1B0GTQ4 84 aa4.92□□□□□ -1.62
SNX1-207ENST00000559401 KRTAP1-4P0C5Y4 121 aa4.92□□□□□ -1.62
SNX1-207ENST00000559401 RPL13AP40429 203 aaKnown RBP4.92□□□□□ -1.62
SNX1-207ENST00000559401 HERV-K104P63124 156 aa4.92□□□□□ -1.62
SNX1-207ENST00000559401 FAM19A1Q7Z5A9 133 aa4.92□□□□□ -1.62
SNX1-207ENST00000559401 MAP1LC3CQ9BXW4 147 aa4.92□□□□□ -1.62
SNX1-207ENST00000559401 LINC00587B1AMM8 73 aa4.91□□□□□ -1.62
SNX1-207ENST00000559401 TMEM238C9JI98 176 aa4.91□□□□□ -1.62
SNX1-207ENST00000559401 LEPROTO15243 131 aa4.91□□□□□ -1.62
SNX1-207ENST00000559401 IGKCP01834 107 aa4.91□□□□□ -1.62
SNX1-207ENST00000559401 PRLHP81277 87 aa4.91□□□□□ -1.62
SNX1-207ENST00000559401 BOD1L2Q8IYS8 172 aa4.91□□□□□ -1.62
SNX1-207ENST00000559401 MIR7-3HGQ8N6C7 128 aa4.91□□□□□ -1.62
SNX1-207ENST00000559401 Q8NDZ9 215 aa4.91□□□□□ -1.62
SNX1-207ENST00000559401 PLEKHB2Q96CS7 222 aa4.91□□□□□ -1.62
SNX1-207ENST00000559401 TMEM126AQ9H061 195 aa4.91□□□□□ -1.62
SNX1-207ENST00000559401 J3QQQ9 107 aa4.9□□□□□ -1.63
SNX1-207ENST00000559401 NCR3O14931 201 aa4.9□□□□□ -1.63
SNX1-207ENST00000559401 HIST1H2BKO60814 126 aa4.9□□□□□ -1.63
SNX1-207ENST00000559401 S100A6P06703 90 aa4.9□□□□□ -1.63
SNX1-207ENST00000559401 HIST1H2BJP06899 126 aa4.9□□□□□ -1.63
SNX1-207ENST00000559401 LGALS3P17931 250 aaKnown RBP4.9□□□□□ -1.63
SNX1-207ENST00000559401 HIST1H2BOP23527 126 aa4.9□□□□□ -1.63
SNX1-207ENST00000559401 HIST1H2BBP33778 126 aa4.9□□□□□ -1.63
SNX1-207ENST00000559401 HIST1H2BDP58876 126 aa4.9□□□□□ -1.63
SNX1-207ENST00000559401 TSPEAR-AS2P59090 65 aa4.9□□□□□ -1.63
SNX1-207ENST00000559401 HIST1H2BCP62807 126 aa4.9□□□□□ -1.63
SNX1-207ENST00000559401 HIST2H2BEQ16778 126 aa4.9□□□□□ -1.63
SNX1-207ENST00000559401 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.9□□□□□ -1.63
SNX1-207ENST00000559401 HIST1H2BHQ93079 126 aa4.9□□□□□ -1.63
SNX1-207ENST00000559401 HIST1H2BNQ99877 126 aa4.9□□□□□ -1.63
SNX1-207ENST00000559401 HIST1H2BMQ99879 126 aa4.9□□□□□ -1.63
SNX1-207ENST00000559401 M0R378 163 aa4.89□□□□□ -1.63
SNX1-207ENST00000559401 DAND5Q8N907 189 aa4.89□□□□□ -1.63
SNX1-207ENST00000559401 CRYGAP11844 174 aa4.88□□□□□ -1.63
SNX1-207ENST00000559401 MIEN1Q9BRT3 115 aa4.88□□□□□ -1.63
SNX1-207ENST00000559401 HIGD2AQ9BW72 106 aa4.88□□□□□ -1.63
SNX1-207ENST00000559401 A0A087X002 238 aa4.87□□□□□ -1.63
SNX1-207ENST00000559401 SYS1-DBNDD2H3BUS1 97 aa4.87□□□□□ -1.63
SNX1-207ENST00000559401 NMUP48645 174 aa4.87□□□□□ -1.63
SNX1-207ENST00000559401 S100A12P80511 92 aa4.87□□□□□ -1.63
SNX1-207ENST00000559401 KRTAP13-1Q8IUC0 172 aa4.87□□□□□ -1.63
SNX1-207ENST00000559401 TYMSOSQ8TAI1 123 aa4.87□□□□□ -1.63
SNX1-207ENST00000559401 ANAPC11Q9NYG5 84 aa4.87□□□□□ -1.63
SNX1-207ENST00000559401 TNXBP22105 4242 aa4.86□□□□□ -1.63
SNX1-207ENST00000559401 PRYO14603 147 aa4.86□□□□□ -1.63
SNX1-207ENST00000559401 TSPAN13O95857 204 aa4.86□□□□□ -1.63
SNX1-207ENST00000559401 IGKV2D-26A0A0A0MRZ7 120 aa4.85□□□□□ -1.63
SNX1-207ENST00000559401 ETDCA0A1B0GVM5 59 aa4.85□□□□□ -1.63
SNX1-207ENST00000559401 C5orf52A6NGY3 159 aa4.85□□□□□ -1.63
SNX1-207ENST00000559401 E9PLD3 99 aa4.85□□□□□ -1.63
SNX1-207ENST00000559401 KRTDAPP60985 99 aa4.85□□□□□ -1.63
SNX1-207ENST00000559401 NPC2P61916 151 aa4.85□□□□□ -1.63
SNX1-207ENST00000559401 SNRPEP62304 92 aaKnown RBP4.85□□□□□ -1.63
SNX1-207ENST00000559401 COA6Q5JTJ3 125 aaKnown RBP4.85□□□□□ -1.63
SNX1-207ENST00000559401 PET117Q6UWS5 81 aa4.85□□□□□ -1.63
SNX1-207ENST00000559401 TRBV10-3A0A0K0K1G6 114 aa4.84□□□□□ -1.63
SNX1-207ENST00000559401 LOC105371267A0A1B0GV96 52 aa4.84□□□□□ -1.63
SNX1-207ENST00000559401 PRR4Q16378 134 aa4.84□□□□□ -1.63
SNX1-207ENST00000559401 FAM229BQ4G0N7 80 aa4.84□□□□□ -1.63
SNX1-207ENST00000559401 S100A7L2Q5SY68 101 aa4.84□□□□□ -1.63
SNX1-207ENST00000559401 UBR4Q5T4S7 5183 aa4.84□□□□□ -1.63
SNX1-207ENST00000559401 A0A0J9YXY3 114 aa4.83□□□□□ -1.64
SNX1-207ENST00000559401 C3orf79P0CE67 100 aa4.83□□□□□ -1.64
SNX1-207ENST00000559401 DDTP30046 118 aa4.83□□□□□ -1.64
SNX1-207ENST00000559401 KRTAP13-2Q52LG2 175 aa4.83□□□□□ -1.64
SNX1-207ENST00000559401 LINC01545Q5VT33 79 aa4.83□□□□□ -1.64
SNX1-207ENST00000559401 SPANXB1Q9NS25 103 aaPredicted RBP4.83□□□□□ -1.64
SNX1-207ENST00000559401 ZNF706Q9Y5V0 76 aaPredicted RBP4.83□□□□□ -1.64
SNX1-207ENST00000559401 TRBV10-2A0A0K0K1G8 114 aa4.82□□□□□ -1.64
SNX1-207ENST00000559401 C20orf202A1L168 122 aa4.82□□□□□ -1.64
SNX1-207ENST00000559401 ZNF815PA8K554 130 aa4.82□□□□□ -1.64
SNX1-207ENST00000559401 S100A2P29034 98 aa4.82□□□□□ -1.64
SNX1-207ENST00000559401 LINC00337Q8N6G1 96 aa4.82□□□□□ -1.64
SNX1-207ENST00000559401 KCNQ1DNQ9H478 68 aa4.82□□□□□ -1.64
SNX1-207ENST00000559401 LOC107984156A0A0G2JMH3 177 aa4.81□□□□□ -1.64
SNX1-207ENST00000559401 SPRR1AP35321 89 aa4.81□□□□□ -1.64
SNX1-207ENST00000559401 ADAMTSL4-AS1Q5T5F5 129 aa4.81□□□□□ -1.64
SNX1-207ENST00000559401 ARL17AQ8IVW1 177 aa4.81□□□□□ -1.64
SNX1-207ENST00000559401 HIST3H2BBQ8N257 126 aa4.81□□□□□ -1.64
SNX1-207ENST00000559401 LINC00304Q8N9R0 145 aa4.81□□□□□ -1.64
SNX1-207ENST00000559401 SPRR4Q96PI1 79 aa4.81□□□□□ -1.64
SNX1-207ENST00000559401 NDUFC2O95298 119 aa4.8□□□□□ -1.64
SNX1-207ENST00000559401 SOSTDC1Q6X4U4 206 aa4.8□□□□□ -1.64
SNX1-207ENST00000559401 ATOH7Q8N100 152 aa4.8□□□□□ -1.64
SNX1-207ENST00000559401 C3orf22Q8N5N4 141 aa4.8□□□□□ -1.64
SNX1-207ENST00000559401 SMCR5Q8TEV8 140 aa4.8□□□□□ -1.64
SNX1-207ENST00000559401 TTTY13Q9BZ97 58 aa4.8□□□□□ -1.64
SNX1-207ENST00000559401 PPDPFQ9H3Y8 114 aa4.8□□□□□ -1.64
SNX1-207ENST00000559401 TRAV23DV6A0A075B6W5 121 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms