RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 KRTAP13-1Q8IUC0 172 aa9.1□□□□□ -0.95
TPM1-211ENST00000558314 TMEM126AQ9H061 195 aa9.1□□□□□ -0.95
TPM1-211ENST00000558314 C11orf86A6NJI1 115 aa9.09□□□□□ -0.95
TPM1-211ENST00000558314 LINC00158P58513 81 aa9.09□□□□□ -0.95
TPM1-211ENST00000558314 LINC00304Q8N9R0 145 aa9.09□□□□□ -0.95
TPM1-211ENST00000558314 HIGD2AQ9BW72 106 aa9.07□□□□□ -0.96
TPM1-211ENST00000558314 COX17Q14061 63 aa9.06□□□□□ -0.96
TPM1-211ENST00000558314 FAM229BQ4G0N7 80 aa9.06□□□□□ -0.96
TPM1-211ENST00000558314 Q8NDZ9 215 aa9.06□□□□□ -0.96
TPM1-211ENST00000558314 CHTOPQ9Y3Y2 248 aaKnown RBP9.06□□□□□ -0.96
TPM1-211ENST00000558314 M0R378 163 aa9.05□□□□□ -0.96
TPM1-211ENST00000558314 ATP6V1G1O75348 118 aa9.05□□□□□ -0.96
TPM1-211ENST00000558314 S100A1P23297 94 aa9.05□□□□□ -0.96
TPM1-211ENST00000558314 A0A0U1RQV1 116 aa9.03□□□□□ -0.96
TPM1-211ENST00000558314 COLCA2A8K830 154 aa9.03□□□□□ -0.96
TPM1-211ENST00000558314 CHCHD1Q96BP2 118 aaKnown RBP9.03□□□□□ -0.96
TPM1-211ENST00000558314 TRGC2P03986 189 aa9.02□□□□□ -0.97
TPM1-211ENST00000558314 MEIG1Q5JSS6 88 aa9.02□□□□□ -0.97
TPM1-211ENST00000558314 SFTA2Q6UW10 78 aa9.02□□□□□ -0.97
TPM1-211ENST00000558314 C3orf22Q8N5N4 141 aa9.02□□□□□ -0.97
TPM1-211ENST00000558314 MUC2Q02817 5179 aa9.02□□□□□ -0.97
TPM1-211ENST00000558314 PLEKHB2Q96CS7 222 aa9.01□□□□□ -0.97
TPM1-211ENST00000558314 CDIP1Q9H305 208 aa9.01□□□□□ -0.97
TPM1-211ENST00000558314 NCR3O14931 201 aa9□□□□□ -0.97
TPM1-211ENST00000558314 SMIM13P0DJ93 91 aa9□□□□□ -0.97
TPM1-211ENST00000558314 IGLV7-46A0A075B6I9 117 aa8.99□□□□□ -0.97
TPM1-211ENST00000558314 TMEM223A0PJW6 202 aa8.99□□□□□ -0.97
TPM1-211ENST00000558314 H0Y8G0 127 aa8.99□□□□□ -0.97
TPM1-211ENST00000558314 BOD1L2Q8IYS8 172 aa8.99□□□□□ -0.97
TPM1-211ENST00000558314 IFI27L1Q96BM0 104 aa8.99□□□□□ -0.97
TPM1-211ENST00000558314 HSBP1O75506 76 aa8.97□□□□□ -0.97
TPM1-211ENST00000558314 PPDPFQ9H3Y8 114 aa8.97□□□□□ -0.97
TPM1-211ENST00000558314 MIR7-3HGQ8N6C7 128 aa8.96□□□□□ -0.98
TPM1-211ENST00000558314 TRAV12-1A0A0B4J245 112 aa8.95□□□□□ -0.98
TPM1-211ENST00000558314 C4orf48Q5BLP8 95 aa8.95□□□□□ -0.98
TPM1-211ENST00000558314 FAM19A2Q8N3H0 131 aa8.95□□□□□ -0.98
TPM1-211ENST00000558314 SPRR4Q96PI1 79 aa8.95□□□□□ -0.98
TPM1-211ENST00000558314 ETDCA0A1B0GVM5 59 aa8.94□□□□□ -0.98
TPM1-211ENST00000558314 DAND5Q8N907 189 aa8.94□□□□□ -0.98
TPM1-211ENST00000558314 ZNF706Q9Y5V0 76 aaPredicted RBP8.94□□□□□ -0.98
TPM1-211ENST00000558314 PRYO14603 147 aa8.93□□□□□ -0.98
TPM1-211ENST00000558314 NDUFA12Q9UI09 145 aa8.93□□□□□ -0.98
TPM1-211ENST00000558314 SMCR5Q8TEV8 140 aa8.92□□□□□ -0.98
TPM1-211ENST00000558314 MYMXA0A1B0GTQ4 84 aa8.91□□□□□ -0.98
TPM1-211ENST00000558314 SERF1AO75920 110 aa8.91□□□□□ -0.98
TPM1-211ENST00000558314 HERV-K104P63124 156 aa8.91□□□□□ -0.98
TPM1-211ENST00000558314 TPRXLQ17RH7 258 aa8.91□□□□□ -0.98
TPM1-211ENST00000558314 Q8NBF4 154 aa8.91□□□□□ -0.98
TPM1-211ENST00000558314 HSPB8Q9UJY1 196 aa8.91□□□□□ -0.98
TPM1-211ENST00000558314 TRBV10-3A0A0K0K1G6 114 aa8.9□□□□□ -0.98
TPM1-211ENST00000558314 SPAG11AQ6PDA7 123 aa8.9□□□□□ -0.98
TPM1-211ENST00000558314 MAP1LC3CQ9BXW4 147 aa8.9□□□□□ -0.98
TPM1-211ENST00000558314 LEPROTL1O95214 131 aa8.89□□□□□ -0.99
TPM1-211ENST00000558314 S100A12P80511 92 aa8.89□□□□□ -0.99
TPM1-211ENST00000558314 LINC00587B1AMM8 73 aa8.88□□□□□ -0.99
TPM1-211ENST00000558314 HIST1H2BKO60814 126 aa8.88□□□□□ -0.99
TPM1-211ENST00000558314 HIST1H2BJP06899 126 aa8.88□□□□□ -0.99
TPM1-211ENST00000558314 HIST1H2BOP23527 126 aa8.88□□□□□ -0.99
TPM1-211ENST00000558314 HIST1H2BBP33778 126 aa8.88□□□□□ -0.99
TPM1-211ENST00000558314 HIST1H2BDP58876 126 aa8.88□□□□□ -0.99
TPM1-211ENST00000558314 HIST1H2BCP62807 126 aa8.88□□□□□ -0.99
TPM1-211ENST00000558314 HIST2H2BEQ16778 126 aa8.88□□□□□ -0.99
TPM1-211ENST00000558314 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.88□□□□□ -0.99
TPM1-211ENST00000558314 GAGE2AQ6NT46 116 aa8.88□□□□□ -0.99
TPM1-211ENST00000558314 LINC00337Q8N6G1 96 aa8.88□□□□□ -0.99
TPM1-211ENST00000558314 HIST1H2BHQ93079 126 aa8.88□□□□□ -0.99
TPM1-211ENST00000558314 HIST1H2BNQ99877 126 aa8.88□□□□□ -0.99
TPM1-211ENST00000558314 HIST1H2BMQ99879 126 aa8.88□□□□□ -0.99
TPM1-211ENST00000558314 KCNQ1DNQ9H478 68 aa8.88□□□□□ -0.99
TPM1-211ENST00000558314 IGLV9-49A0A0B4J1Y8 123 aa8.86□□□□□ -0.99
TPM1-211ENST00000558314 TSPEAR-AS2P59090 65 aa8.86□□□□□ -0.99
TPM1-211ENST00000558314 PMCHL2Q9BQD1 86 aa8.86□□□□□ -0.99
TPM1-211ENST00000558314 LEPROTO15243 131 aa8.85□□□□□ -0.99
TPM1-211ENST00000558314 FABP4P15090 132 aa8.85□□□□□ -0.99
TPM1-211ENST00000558314 DDTP30046 118 aa8.85□□□□□ -0.99
TPM1-211ENST00000558314 SPRR1AP35321 89 aa8.85□□□□□ -0.99
TPM1-211ENST00000558314 LINC00310P59036 64 aa8.84□□□□□ -0.99
TPM1-211ENST00000558314 CTAG1AP78358 180 aa8.84□□□□□ -0.99
TPM1-211ENST00000558314 MIEN1Q9BRT3 115 aa8.84□□□□□ -0.99
TPM1-211ENST00000558314 FAT4Q6V0I7 4981 aa8.83□□□□□ -1
TPM1-211ENST00000558314 ERC2-IT1O76042 136 aa8.83□□□□□ -1
TPM1-211ENST00000558314 NPC2P61916 151 aa8.83□□□□□ -1
TPM1-211ENST00000558314 MOBPQ13875 183 aa8.83□□□□□ -1
TPM1-211ENST00000558314 B5MCH6 92 aa8.82□□□□□ -1
TPM1-211ENST00000558314 KRTAP4-16G5E9R7 235 aaPredicted RBP8.82□□□□□ -1
TPM1-211ENST00000558314 J3QQQ9 107 aa8.82□□□□□ -1
TPM1-211ENST00000558314 LGALS3P17931 250 aaKnown RBP8.82□□□□□ -1
TPM1-211ENST00000558314 HERVK_113P61574 105 aa8.82□□□□□ -1
TPM1-211ENST00000558314 COA6Q5JTJ3 125 aaKnown RBP8.82□□□□□ -1
TPM1-211ENST00000558314 S100A7L2Q5SY68 101 aa8.82□□□□□ -1
TPM1-211ENST00000558314 FP248Q71RG6 208 aaPredicted RBP8.82□□□□□ -1
TPM1-211ENST00000558314 DPM2O94777 84 aa8.81□□□□□ -1
TPM1-211ENST00000558314 PLNP26678 52 aa8.81□□□□□ -1
TPM1-211ENST00000558314 MUC17Q685J3 4493 aa8.8□□□□□ -1
TPM1-211ENST00000558314 SPINK1P00995 79 aa8.79□□□□□ -1
TPM1-211ENST00000558314 KRTAP9-2Q9BYQ4 174 aa8.79□□□□□ -1
TPM1-211ENST00000558314 SPANXB1Q9NS25 103 aaPredicted RBP8.79□□□□□ -1
TPM1-211ENST00000558314 IGKCP01834 107 aa8.78□□□□□ -1
TPM1-211ENST00000558314 LINC00483Q53H64 154 aa8.78□□□□□ -1
TPM1-211ENST00000558314 LCE2AQ5TA79 106 aaPredicted RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms