RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 TCL1BO95988 128 aa8.16□□□□□ -1.1
SHMT2-233ENST00000557529 RPL28P46779 137 aaKnown RBP8.16□□□□□ -1.1
SHMT2-233ENST00000557529 SLPIP03973 132 aa8.15□□□□□ -1.1
SHMT2-233ENST00000557529 ATXN8Q156A1 80 aa8.15□□□□□ -1.1
SHMT2-233ENST00000557529 TMEM126AQ9H061 195 aa8.15□□□□□ -1.1
SHMT2-233ENST00000557529 XAGE1AQ9HD64 81 aa8.15□□□□□ -1.1
SHMT2-233ENST00000557529 F8W1H4 67 aa8.14□□□□□ -1.11
SHMT2-233ENST00000557529 NCR3O14931 201 aa8.13□□□□□ -1.11
SHMT2-233ENST00000557529 CNBPP62633 177 aaKnown RBP8.13□□□□□ -1.11
SHMT2-233ENST00000557529 PRR3P79522 188 aaKnown RBP8.13□□□□□ -1.11
SHMT2-233ENST00000557529 WFDC2Q14508 124 aa8.13□□□□□ -1.11
SHMT2-233ENST00000557529 GAGE2EQ4V326 116 aa8.13□□□□□ -1.11
SHMT2-233ENST00000557529 S100A7L2Q5SY68 101 aa8.13□□□□□ -1.11
SHMT2-233ENST00000557529 Q6ZRP5 223 aa8.13□□□□□ -1.11
SHMT2-233ENST00000557529 SMIM11BQ8TCY0 68 aa8.13□□□□□ -1.11
SHMT2-233ENST00000557529 GAGE2DQ9UEU5 116 aa8.13□□□□□ -1.11
SHMT2-233ENST00000557529 C3orf84H3BNL1 204 aa8.12□□□□□ -1.11
SHMT2-233ENST00000557529 Q6ZRN7 208 aaPredicted RBP8.12□□□□□ -1.11
SHMT2-233ENST00000557529 Q8NDZ9 215 aa8.12□□□□□ -1.11
SHMT2-233ENST00000557529 LOC107984640A0A0U1RRK4 108 aa8.11□□□□□ -1.11
SHMT2-233ENST00000557529 M0R2N4 97 aa8.11□□□□□ -1.11
SHMT2-233ENST00000557529 RPL18AQ02543 176 aaKnown RBP8.11□□□□□ -1.11
SHMT2-233ENST00000557529 Q6ZR54 194 aa8.11□□□□□ -1.11
SHMT2-233ENST00000557529 DNAH1Q9P2D7 4330 aa8.11□□□□□ -1.11
SHMT2-233ENST00000557529 PLECQ15149 4684 aaKnown RBP8.11□□□□□ -1.11
SHMT2-233ENST00000557529 TENM2Q9NT68 2774 aa8.11□□□□□ -1.11
SHMT2-233ENST00000557529 H0YGX0 51 aa8.1□□□□□ -1.11
SHMT2-233ENST00000557529 LST1O00453 97 aa8.1□□□□□ -1.11
SHMT2-233ENST00000557529 VPREB1P12018 145 aa8.1□□□□□ -1.11
SHMT2-233ENST00000557529 CSMD3Q7Z407 3707 aa8.1□□□□□ -1.11
SHMT2-233ENST00000557529 LRCOL1A6NCL2 159 aa8.1□□□□□ -1.11
SHMT2-233ENST00000557529 M0R378 163 aa8.1□□□□□ -1.11
SHMT2-233ENST00000557529 IGLV6-57P01721 117 aa8.1□□□□□ -1.11
SHMT2-233ENST00000557529 LINC01620Q4KN68 170 aa8.1□□□□□ -1.11
SHMT2-233ENST00000557529 C9orf129Q5T035 196 aaKnown RBP8.1□□□□□ -1.11
SHMT2-233ENST00000557529 CLEC2BQ92478 149 aa8.1□□□□□ -1.11
SHMT2-233ENST00000557529 PRO0461Q9UI25 63 aa8.1□□□□□ -1.11
SHMT2-233ENST00000557529 PLA2G2DQ9UNK4 145 aa8.1□□□□□ -1.11
SHMT2-233ENST00000557529 PKIGQ9Y2B9 76 aa8.1□□□□□ -1.11
SHMT2-233ENST00000557529 LY6G6CO95867 125 aa8.09□□□□□ -1.12
SHMT2-233ENST00000557529 LINC00476Q8WZB0 136 aa8.09□□□□□ -1.12
SHMT2-233ENST00000557529 CBY1Q9Y3M2 126 aa8.09□□□□□ -1.12
SHMT2-233ENST00000557529 VPS13DQ5THJ4 4388 aa8.09□□□□□ -1.12
SHMT2-233ENST00000557529 STARD9Q9P2P6 4700 aa8.08□□□□□ -1.12
SHMT2-233ENST00000557529 C9JAW5 83 aa8.08□□□□□ -1.12
SHMT2-233ENST00000557529 TRACP01848 142 aa8.07□□□□□ -1.12
SHMT2-233ENST00000557529 GAGE2BQ13066 116 aa8.07□□□□□ -1.12
SHMT2-233ENST00000557529 TRBV10-3A0A0K0K1G6 114 aa8.06□□□□□ -1.12
SHMT2-233ENST00000557529 M0QXV9 152 aa8.06□□□□□ -1.12
SHMT2-233ENST00000557529 SLC25A20O43772 301 aa8.06□□□□□ -1.12
SHMT2-233ENST00000557529 MTURNQ8N3F0 131 aa8.06□□□□□ -1.12
SHMT2-233ENST00000557529 NKAPP1Q8N9T2 125 aa8.06□□□□□ -1.12
SHMT2-233ENST00000557529 IGLV5-37A0A075B6J1 123 aa8.05□□□□□ -1.12
SHMT2-233ENST00000557529 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.05□□□□□ -1.12
SHMT2-233ENST00000557529 C1orf134Q5TEV5 83 aa8.05□□□□□ -1.12
SHMT2-233ENST00000557529 TRAV23DV6A0A075B6W5 121 aa8.04□□□□□ -1.12
SHMT2-233ENST00000557529 C16orf90A8MZG2 172 aa8.04□□□□□ -1.12
SHMT2-233ENST00000557529 SMCPP49901 116 aaPredicted RBP8.04□□□□□ -1.12
SHMT2-233ENST00000557529 C6orf99Q4VX62 202 aa8.04□□□□□ -1.12
SHMT2-233ENST00000557529 Q8N814 137 aa8.04□□□□□ -1.12
SHMT2-233ENST00000557529 LINC01600Q96MT4 127 aa8.04□□□□□ -1.12
SHMT2-233ENST00000557529 TGP01266 2768 aa8.03□□□□□ -1.12
SHMT2-233ENST00000557529 A0A087WTM6 91 aa8.03□□□□□ -1.12
SHMT2-233ENST00000557529 A0A1B0GX51 115 aa8.03□□□□□ -1.12
SHMT2-233ENST00000557529 H3BT86 120 aa8.03□□□□□ -1.12
SHMT2-233ENST00000557529 SERTAD4-AS1Q5TG53 156 aa8.03□□□□□ -1.12
SHMT2-233ENST00000557529 ANKRD29Q8N6D5 301 aa8.03□□□□□ -1.12
SHMT2-233ENST00000557529 C9orf163Q8N9P6 203 aa8.03□□□□□ -1.12
SHMT2-233ENST00000557529 FAM218AQ96MZ4 157 aa8.03□□□□□ -1.12
SHMT2-233ENST00000557529 SNCGO76070 127 aa8.02□□□□□ -1.13
SHMT2-233ENST00000557529 DNAL4O96015 105 aa8.02□□□□□ -1.13
SHMT2-233ENST00000557529 DIRC1Q969H9 104 aa8.02□□□□□ -1.13
SHMT2-233ENST00000557529 A0A096LNI7 61 aa8.01□□□□□ -1.13
SHMT2-233ENST00000557529 TRBV7-6A0A0J9YX20 115 aa8.01□□□□□ -1.13
SHMT2-233ENST00000557529 ZNF73O43830 326 aaPredicted RBP8.01□□□□□ -1.13
SHMT2-233ENST00000557529 ETDBQ3ZM63 59 aa8.01□□□□□ -1.13
SHMT2-233ENST00000557529 C7orf33Q8WU49 177 aa8.01□□□□□ -1.13
SHMT2-233ENST00000557529 A0A087WYN8 130 aa8□□□□□ -1.13
SHMT2-233ENST00000557529 FAM168BA1KXE4 195 aa7.99□□□□□ -1.13
SHMT2-233ENST00000557529 OCIAD2Q56VL3 154 aa7.99□□□□□ -1.13
SHMT2-233ENST00000557529 TEN1Q86WV5 123 aa7.99□□□□□ -1.13
SHMT2-233ENST00000557529 LINC00474Q9P2X8 69 aa7.99□□□□□ -1.13
SHMT2-233ENST00000557529 COX7BP24311 80 aa7.98□□□□□ -1.13
SHMT2-233ENST00000557529 FAM19A5Q7Z5A7 132 aaPredicted RBP7.98□□□□□ -1.13
SHMT2-233ENST00000557529 LYSTQ99698 3801 aa7.98□□□□□ -1.13
SHMT2-233ENST00000557529 KCNQ1DNQ9H478 68 aa7.98□□□□□ -1.13
SHMT2-233ENST00000557529 C22orf24Q9Y442 160 aa7.98□□□□□ -1.13
SHMT2-233ENST00000557529 IGKV2-24A0A0C4DH68 120 aa7.97□□□□□ -1.13
SHMT2-233ENST00000557529 K7ERU9 68 aa7.97□□□□□ -1.13
SHMT2-233ENST00000557529 LINC00575Q6W349 94 aa7.97□□□□□ -1.13
SHMT2-233ENST00000557529 SDIM1Q6ZPB5 146 aa7.97□□□□□ -1.13
SHMT2-233ENST00000557529 MRPL55Q7Z7F7 128 aaKnown RBP7.97□□□□□ -1.13
SHMT2-233ENST00000557529 PRYO14603 147 aa7.97□□□□□ -1.13
SHMT2-233ENST00000557529 BAALC-AS2P0C853 105 aa7.97□□□□□ -1.13
SHMT2-233ENST00000557529 KRTAP7-1Q8IUC3 87 aa7.97□□□□□ -1.13
SHMT2-233ENST00000557529 LINC00167Q96N53 147 aa7.97□□□□□ -1.13
SHMT2-233ENST00000557529 ALMS1Q8TCU4 4167 aa7.96□□□□□ -1.13
SHMT2-233ENST00000557529 IGLV1-50A0A075B6I6 118 aa7.96□□□□□ -1.14
SHMT2-233ENST00000557529 J3QR89 54 aa7.96□□□□□ -1.14
SHMT2-233ENST00000557529 ELOF1P60002 83 aaKnown RBP7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms