RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 K7EMI3 77 aa2.9□□□□□ -1.95
ATXN3-239ENST00000556315 SH2D1AO60880 128 aa2.9□□□□□ -1.95
ATXN3-239ENST00000556315 C1orf137Q5JT78 98 aa2.9□□□□□ -1.95
ATXN3-239ENST00000556315 BVES-AS1Q5T3Y7 98 aa2.9□□□□□ -1.95
ATXN3-239ENST00000556315 GTF2H5Q6ZYL4 71 aa2.9□□□□□ -1.95
ATXN3-239ENST00000556315 TMEM243Q9BU79 118 aa2.9□□□□□ -1.95
ATXN3-239ENST00000556315 NXT2Q9NPJ8 142 aaKnown RBP2.9□□□□□ -1.95
ATXN3-239ENST00000556315 A0A1W2PNN7 141 aa2.89□□□□□ -1.95
ATXN3-239ENST00000556315 H3BRM9 83 aa2.89□□□□□ -1.95
ATXN3-239ENST00000556315 K7ERU9 68 aa2.89□□□□□ -1.95
ATXN3-239ENST00000556315 TAX1BP3O14907 124 aa2.89□□□□□ -1.95
ATXN3-239ENST00000556315 CCL25O15444 150 aa2.89□□□□□ -1.95
ATXN3-239ENST00000556315 ATP5LO75964 103 aa2.89□□□□□ -1.95
ATXN3-239ENST00000556315 HBDP02042 147 aa2.89□□□□□ -1.95
ATXN3-239ENST00000556315 SMIM17P0DL12 118 aa2.89□□□□□ -1.95
ATXN3-239ENST00000556315 HINT1P49773 126 aaPredicted RBP2.89□□□□□ -1.95
ATXN3-239ENST00000556315 HSD52Q0P140 79 aa2.89□□□□□ -1.95
ATXN3-239ENST00000556315 VAMP3Q15836 100 aa2.89□□□□□ -1.95
ATXN3-239ENST00000556315 OR5A1Q8NGJ0 315 aa2.89□□□□□ -1.95
ATXN3-239ENST00000556315 CHCHD10Q8WYQ3 142 aaPredicted RBP2.89□□□□□ -1.95
ATXN3-239ENST00000556315 PRELID3AQ96N28 172 aa2.89□□□□□ -1.95
ATXN3-239ENST00000556315 HIGD1BQ9P298 99 aa2.89□□□□□ -1.95
ATXN3-239ENST00000556315 H0Y9J4 135 aa2.88□□□□□ -1.95
ATXN3-239ENST00000556315 M0QY20 66 aa2.88□□□□□ -1.95
ATXN3-239ENST00000556315 UBE2L6O14933 153 aa2.88□□□□□ -1.95
ATXN3-239ENST00000556315 PPP1R17O96001 155 aa2.88□□□□□ -1.95
ATXN3-239ENST00000556315 IGLV7-43P04211 117 aa2.88□□□□□ -1.95
ATXN3-239ENST00000556315 IGLC6P0CF74 106 aa2.88□□□□□ -1.95
ATXN3-239ENST00000556315 FCER1GP30273 86 aa2.88□□□□□ -1.95
ATXN3-239ENST00000556315 RPL13AP40429 203 aaKnown RBP2.88□□□□□ -1.95
ATXN3-239ENST00000556315 NDUFV3P56181 108 aaKnown RBP2.88□□□□□ -1.95
ATXN3-239ENST00000556315 TAL2Q16559 108 aa2.88□□□□□ -1.95
ATXN3-239ENST00000556315 LCE3CQ5T5A8 94 aa2.88□□□□□ -1.95
ATXN3-239ENST00000556315 SPANXN1Q5VSR9 72 aa2.88□□□□□ -1.95
ATXN3-239ENST00000556315 LYZL1Q6UWQ5 148 aa2.88□□□□□ -1.95
ATXN3-239ENST00000556315 SMIM15Q7Z3B0 74 aa2.88□□□□□ -1.95
ATXN3-239ENST00000556315 Q8N377 158 aa2.88□□□□□ -1.95
ATXN3-239ENST00000556315 IFI27L1Q96BM0 104 aa2.88□□□□□ -1.95
ATXN3-239ENST00000556315 CARD19Q96LW7 228 aa2.88□□□□□ -1.95
ATXN3-239ENST00000556315 AP1S3Q96PC3 154 aa2.88□□□□□ -1.95
ATXN3-239ENST00000556315 OCR1Q9BZK8 76 aa2.88□□□□□ -1.95
ATXN3-239ENST00000556315 MAP1LC3AQ9H492 121 aa2.88□□□□□ -1.95
ATXN3-239ENST00000556315 IGHV1-58A0A0C4DH39 117 aa2.87□□□□□ -1.95
ATXN3-239ENST00000556315 IGKV3OR2-268A0A0C4DH90 116 aa2.87□□□□□ -1.95
ATXN3-239ENST00000556315 LOC107984640A0A0U1RRK4 108 aa2.87□□□□□ -1.95
ATXN3-239ENST00000556315 SNAI2O43623 268 aa2.87□□□□□ -1.95
ATXN3-239ENST00000556315 FGF6P10767 208 aa2.87□□□□□ -1.95
ATXN3-239ENST00000556315 CKS2P33552 79 aa2.87□□□□□ -1.95
ATXN3-239ENST00000556315 IFI27P40305 119 aaPredicted RBP2.87□□□□□ -1.95
ATXN3-239ENST00000556315 UBE2D1P51668 147 aa2.87□□□□□ -1.95
ATXN3-239ENST00000556315 SYCNQ0VAF6 134 aa2.87□□□□□ -1.95
ATXN3-239ENST00000556315 MRPL51Q4U2R6 128 aaKnown RBP2.87□□□□□ -1.95
ATXN3-239ENST00000556315 ERASQ7Z444 233 aa2.87□□□□□ -1.95
ATXN3-239ENST00000556315 AMN1Q8IY45 258 aa2.87□□□□□ -1.95
ATXN3-239ENST00000556315 ATOH7Q8N100 152 aa2.87□□□□□ -1.95
ATXN3-239ENST00000556315 Q8N8P6 123 aa2.87□□□□□ -1.95
ATXN3-239ENST00000556315 A0A096LNJ9 63 aa2.86□□□□□ -1.95
ATXN3-239ENST00000556315 TRAV12-1A0A0B4J245 112 aa2.86□□□□□ -1.95
ATXN3-239ENST00000556315 MUC21A0A140T8X8 626 aa2.86□□□□□ -1.95
ATXN3-239ENST00000556315 D6R8Y8 96 aa2.86□□□□□ -1.95
ATXN3-239ENST00000556315 KRTAP1-4P0C5Y4 121 aa2.86□□□□□ -1.95
ATXN3-239ENST00000556315 PLNP26678 52 aa2.86□□□□□ -1.95
ATXN3-239ENST00000556315 RPL32P62910 135 aaKnown RBP2.86□□□□□ -1.95
ATXN3-239ENST00000556315 COTL1Q14019 142 aa2.86□□□□□ -1.95
ATXN3-239ENST00000556315 OCIAD2Q56VL3 154 aa2.86□□□□□ -1.95
ATXN3-239ENST00000556315 C9orf116Q5BN46 136 aaPredicted RBP2.86□□□□□ -1.95
ATXN3-239ENST00000556315 AMMECR1LQ6DCA0 310 aa2.86□□□□□ -1.95
ATXN3-239ENST00000556315 C2orf91Q6ZV80 131 aa2.86□□□□□ -1.95
ATXN3-239ENST00000556315 PHF5AQ7RTV0 110 aaKnown RBP2.86□□□□□ -1.95
ATXN3-239ENST00000556315 LINC00526Q96FQ7 95 aa2.86□□□□□ -1.95
ATXN3-239ENST00000556315 MRAP2Q96G30 205 aa2.86□□□□□ -1.95
ATXN3-239ENST00000556315 C20orf78Q9BR46 151 aa2.86□□□□□ -1.95
ATXN3-239ENST00000556315 CST9LQ9H4G1 147 aa2.86□□□□□ -1.95
ATXN3-239ENST00000556315 J3QR89 54 aa2.85□□□□□ -1.95
ATXN3-239ENST00000556315 K7EP34 96 aa2.85□□□□□ -1.95
ATXN3-239ENST00000556315 DPM2O94777 84 aa2.85□□□□□ -1.95
ATXN3-239ENST00000556315 TSPAN13O95857 204 aa2.85□□□□□ -1.95
ATXN3-239ENST00000556315 IGKCP01834 107 aa2.85□□□□□ -1.95
ATXN3-239ENST00000556315 SMIM13P0DJ93 91 aa2.85□□□□□ -1.95
ATXN3-239ENST00000556315 FABP2P12104 132 aa2.85□□□□□ -1.95
ATXN3-239ENST00000556315 XCL1P47992 114 aa2.85□□□□□ -1.95
ATXN3-239ENST00000556315 ORMDL2Q53FV1 153 aa2.85□□□□□ -1.95
ATXN3-239ENST00000556315 LINC00173Q6ZV60 143 aa2.85□□□□□ -1.95
ATXN3-239ENST00000556315 IGLV4-69A0A075B6H9 119 aa2.84□□□□□ -1.95
ATXN3-239ENST00000556315 A0A1W2PPM0 123 aa2.84□□□□□ -1.95
ATXN3-239ENST00000556315 F8W1H4 67 aa2.84□□□□□ -1.95
ATXN3-239ENST00000556315 APOMO95445 188 aa2.84□□□□□ -1.95
ATXN3-239ENST00000556315 NPYP01303 97 aa2.84□□□□□ -1.95
ATXN3-239ENST00000556315 MGPP08493 103 aa2.84□□□□□ -1.95
ATXN3-239ENST00000556315 SCGB1A1P11684 91 aa2.84□□□□□ -1.95
ATXN3-239ENST00000556315 TPPP3Q9BW30 176 aa2.84□□□□□ -1.95
ATXN3-239ENST00000556315 MUC17Q685J3 4493 aa2.83□□□□□ -1.96
ATXN3-239ENST00000556315 LOC389332A0A1B0GUA5 103 aa2.83□□□□□ -1.96
ATXN3-239ENST00000556315 LINC00959A0A1B0GUT2 108 aa2.83□□□□□ -1.96
ATXN3-239ENST00000556315 A0A1B0GWB2 263 aa2.83□□□□□ -1.96
ATXN3-239ENST00000556315 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.83□□□□□ -1.96
ATXN3-239ENST00000556315 NCR2O95944 276 aa2.83□□□□□ -1.96
ATXN3-239ENST00000556315 SS18Q15532 418 aa2.83□□□□□ -1.96
ATXN3-239ENST00000556315 LYRM7Q5U5X0 104 aa2.83□□□□□ -1.96
ATXN3-239ENST00000556315 TMEM101Q96IK0 257 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms