RNA–Protein interactions for RNA: ENST00000555958.5

ATXN3-234, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-234ENST00000555958 BOD1L2Q8IYS8 172 aa1.95□□□□□ -2.1
ATXN3-234ENST00000555958 TSKUQ8WUA8 353 aa1.95□□□□□ -2.1
ATXN3-234ENST00000555958 AP1S3Q96PC3 154 aa1.95□□□□□ -2.1
ATXN3-234ENST00000555958 MRPS26Q9BYN8 205 aaKnown RBP1.95□□□□□ -2.1
ATXN3-234ENST00000555958 RNASE7Q9H1E1 156 aaKnown RBP1.95□□□□□ -2.1
ATXN3-234ENST00000555958 SND1-IT1Q9HBX3 110 aa1.95□□□□□ -2.1
ATXN3-234ENST00000555958 TRAV13-1A0A0B4J241 112 aa1.94□□□□□ -2.1
ATXN3-234ENST00000555958 C19orf71A6NCJ1 209 aa1.94□□□□□ -2.1
ATXN3-234ENST00000555958 CCDC160A6NGH7 325 aa1.94□□□□□ -2.1
ATXN3-234ENST00000555958 COX7A2LO14548 114 aa1.94□□□□□ -2.1
ATXN3-234ENST00000555958 LTAP01374 205 aa1.94□□□□□ -2.1
ATXN3-234ENST00000555958 CEBPGP53567 150 aa1.94□□□□□ -2.1
ATXN3-234ENST00000555958 H2BFSP57053 126 aa1.94□□□□□ -2.1
ATXN3-234ENST00000555958 RAB14P61106 215 aa1.94□□□□□ -2.1
ATXN3-234ENST00000555958 TMEM241Q24JQ0 296 aa1.94□□□□□ -2.1
ATXN3-234ENST00000555958 C2orf82Q6UX34 121 aa1.94□□□□□ -2.1
ATXN3-234ENST00000555958 DAND5Q8N907 189 aa1.94□□□□□ -2.1
ATXN3-234ENST00000555958 SPANXA2-OT1Q8N9U9 137 aa1.94□□□□□ -2.1
ATXN3-234ENST00000555958 OR2D3Q8NGH3 330 aa1.94□□□□□ -2.1
ATXN3-234ENST00000555958 PPP1R1CQ8WVI7 109 aa1.94□□□□□ -2.1
ATXN3-234ENST00000555958 CDC42SE2Q9NRR3 84 aa1.94□□□□□ -2.1
ATXN3-234ENST00000555958 TMEM242Q9NWH2 141 aa1.94□□□□□ -2.1
ATXN3-234ENST00000555958 PKIGQ9Y2B9 76 aa1.94□□□□□ -2.1
ATXN3-234ENST00000555958 ZFP30Q9Y2G7 519 aa1.94□□□□□ -2.1
ATXN3-234ENST00000555958 C22orf24Q9Y442 160 aa1.94□□□□□ -2.1
ATXN3-234ENST00000555958 ZNF706Q9Y5V0 76 aaPredicted RBP1.94□□□□□ -2.1
ATXN3-234ENST00000555958 IGKV2D-26A0A0A0MRZ7 120 aa1.93□□□□□ -2.1
ATXN3-234ENST00000555958 A0A1B0GXF2 115 aa1.93□□□□□ -2.1
ATXN3-234ENST00000555958 A0A1W2PRE2 83 aa1.93□□□□□ -2.1
ATXN3-234ENST00000555958 SDHAF1A6NFY7 115 aa1.93□□□□□ -2.1
ATXN3-234ENST00000555958 K7ERS5 55 aa1.93□□□□□ -2.1
ATXN3-234ENST00000555958 LYRM1O43325 122 aa1.93□□□□□ -2.1
ATXN3-234ENST00000555958 MPC2O95563 127 aa1.93□□□□□ -2.1
ATXN3-234ENST00000555958 AKR1C3P42330 323 aa1.93□□□□□ -2.1
ATXN3-234ENST00000555958 PCOTHQ58A44 107 aa1.93□□□□□ -2.1
ATXN3-234ENST00000555958 SPINT4Q6UDR6 99 aa1.93□□□□□ -2.1
ATXN3-234ENST00000555958 LYZL1Q6UWQ5 148 aa1.93□□□□□ -2.1
ATXN3-234ENST00000555958 Q6ZUT4 128 aa1.93□□□□□ -2.1
ATXN3-234ENST00000555958 BTF3L4Q96K17 158 aa1.93□□□□□ -2.1
ATXN3-234ENST00000555958 SMDT1Q9H4I9 107 aa1.93□□□□□ -2.1
ATXN3-234ENST00000555958 XAGE1AQ9HD64 81 aa1.93□□□□□ -2.1
ATXN3-234ENST00000555958 TMEM167BQ9NRX6 74 aa1.93□□□□□ -2.1
ATXN3-234ENST00000555958 ALG5Q9Y673 324 aa1.93□□□□□ -2.1
ATXN3-234ENST00000555958 BCE1O60756 84 aa1.92□□□□□ -2.1
ATXN3-234ENST00000555958 IGLC6P0CF74 106 aa1.92□□□□□ -2.1
ATXN3-234ENST00000555958 ESDP10768 282 aa1.92□□□□□ -2.1
ATXN3-234ENST00000555958 S100A2P29034 98 aa1.92□□□□□ -2.1
ATXN3-234ENST00000555958 PRLHP81277 87 aa1.92□□□□□ -2.1
ATXN3-234ENST00000555958 FAM104BQ5XKR9 115 aa1.92□□□□□ -2.1
ATXN3-234ENST00000555958 AKAP14Q86UN6 197 aa1.92□□□□□ -2.1
ATXN3-234ENST00000555958 BAGE2Q86Y30 109 aa1.92□□□□□ -2.1
ATXN3-234ENST00000555958 C1orf64Q8NEQ6 169 aa1.92□□□□□ -2.1
ATXN3-234ENST00000555958 STOML3Q8TAV4 291 aa1.92□□□□□ -2.1
ATXN3-234ENST00000555958 HIST1H2BAQ96A08 127 aa1.92□□□□□ -2.1
ATXN3-234ENST00000555958 IMMP2LQ96T52 175 aa1.92□□□□□ -2.1
ATXN3-234ENST00000555958 MRPL35Q9NZE8 188 aaKnown RBP1.92□□□□□ -2.1
ATXN3-234ENST00000555958 RBM12B-AS1Q9P1G2 102 aa1.92□□□□□ -2.1
ATXN3-234ENST00000555958 UBE2D4Q9Y2X8 147 aa1.92□□□□□ -2.1
ATXN3-234ENST00000555958 C9orf92A6NGG3 77 aa1.91□□□□□ -2.1
ATXN3-234ENST00000555958 G3V3Q6 166 aa1.91□□□□□ -2.1
ATXN3-234ENST00000555958 I3L3M4 83 aa1.91□□□□□ -2.1
ATXN3-234ENST00000555958 NDUFA1O15239 70 aa1.91□□□□□ -2.1
ATXN3-234ENST00000555958 RPL28P46779 137 aaKnown RBP1.91□□□□□ -2.1
ATXN3-234ENST00000555958 S100A12P80511 92 aa1.91□□□□□ -2.1
ATXN3-234ENST00000555958 Q5BKY6 102 aa1.91□□□□□ -2.1
ATXN3-234ENST00000555958 RPL7L1Q6DKI1 246 aaKnown RBP1.91□□□□□ -2.1
ATXN3-234ENST00000555958 SMIM12Q96EX1 92 aa1.91□□□□□ -2.1
ATXN3-234ENST00000555958 TRAPPC1Q9Y5R8 145 aa1.91□□□□□ -2.1
ATXN3-234ENST00000555958 CTXND1A0A1B0GTU2 59 aa1.9□□□□□ -2.11
ATXN3-234ENST00000555958 MAP1LC3B2A6NCE7 125 aa1.9□□□□□ -2.11
ATXN3-234ENST00000555958 C1orf196B1AJZ1 125 aa1.9□□□□□ -2.11
ATXN3-234ENST00000555958 NCR2O95944 276 aa1.9□□□□□ -2.11
ATXN3-234ENST00000555958 CXCL1P09341 107 aa1.9□□□□□ -2.11
ATXN3-234ENST00000555958 ZNF25P17030 456 aaPredicted RBP1.9□□□□□ -2.11
ATXN3-234ENST00000555958 LGALS3P17931 250 aaKnown RBP1.9□□□□□ -2.11
ATXN3-234ENST00000555958 RPL39P62891 51 aaKnown RBP1.9□□□□□ -2.11
ATXN3-234ENST00000555958 COX6B2Q6YFQ2 88 aa1.9□□□□□ -2.11
ATXN3-234ENST00000555958 AMN1Q8IY45 258 aa1.9□□□□□ -2.11
ATXN3-234ENST00000555958 PSMG3Q9BT73 122 aaPredicted RBP1.9□□□□□ -2.11
ATXN3-234ENST00000555958 MAP1LC3BQ9GZQ8 125 aa1.9□□□□□ -2.11
ATXN3-234ENST00000555958 C7orf77A4D0Y5 90 aa1.89□□□□□ -2.11
ATXN3-234ENST00000555958 TMEM238C9JI98 176 aa1.89□□□□□ -2.11
ATXN3-234ENST00000555958 SSNA1O43805 119 aa1.89□□□□□ -2.11
ATXN3-234ENST00000555958 NUPR1O60356 82 aa1.89□□□□□ -2.11
ATXN3-234ENST00000555958 IFNA1P01562 189 aa1.89□□□□□ -2.11
ATXN3-234ENST00000555958 TRGC1P0CF51 173 aa1.89□□□□□ -2.11
ATXN3-234ENST00000555958 RPL35P42766 123 aaKnown RBP1.89□□□□□ -2.11
ATXN3-234ENST00000555958 FAM229BQ4G0N7 80 aa1.89□□□□□ -2.11
ATXN3-234ENST00000555958 CENPWQ5EE01 88 aa1.89□□□□□ -2.11
ATXN3-234ENST00000555958 FP248Q71RG6 208 aaPredicted RBP1.89□□□□□ -2.11
ATXN3-234ENST00000555958 OR10D4PQ8NGN7 298 aa1.89□□□□□ -2.11
ATXN3-234ENST00000555958 MED28Q9H204 178 aa1.89□□□□□ -2.11
ATXN3-234ENST00000555958 SPANXB1Q9NS25 103 aaPredicted RBP1.89□□□□□ -2.11
ATXN3-234ENST00000555958 TOMM7Q9P0U1 55 aa1.89□□□□□ -2.11
ATXN3-234ENST00000555958 TNFSF18Q9UNG2 199 aa1.89□□□□□ -2.11
ATXN3-234ENST00000555958 ZNF727A8MUV8 499 aa1.88□□□□□ -2.11
ATXN3-234ENST00000555958 MP68P56378 58 aa1.88□□□□□ -2.11
ATXN3-234ENST00000555958 SERF2P84101 59 aa1.88□□□□□ -2.11
ATXN3-234ENST00000555958 Q6Q795 121 aa1.88□□□□□ -2.11
ATXN3-234ENST00000555958 PLEKHB2Q96CS7 222 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms