RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 TRAV13-2A0A0B4J235 113 aa12.93□□□□□ -0.34
SSH1-209ENST00000551165 LYRM7Q5U5X0 104 aa12.92□□□□□ -0.34
SSH1-209ENST00000551165 TRBV20-1A0A075B6N2 111 aa12.91□□□□□ -0.34
SSH1-209ENST00000551165 OR13C6PQ8NH95 151 aa12.91□□□□□ -0.34
SSH1-209ENST00000551165 RMI2Q96E14 147 aa12.91□□□□□ -0.34
SSH1-209ENST00000551165 SMCPP49901 116 aaPredicted RBP12.9□□□□□ -0.34
SSH1-209ENST00000551165 SYCNQ0VAF6 134 aa12.9□□□□□ -0.34
SSH1-209ENST00000551165 NCR3O14931 201 aa12.89□□□□□ -0.35
SSH1-209ENST00000551165 SMIM11BQ8TCY0 68 aa12.89□□□□□ -0.35
SSH1-209ENST00000551165 VPS13DQ5THJ4 4388 aa12.89□□□□□ -0.35
SSH1-209ENST00000551165 Q6ZRP5 223 aa12.87□□□□□ -0.35
SSH1-209ENST00000551165 NDUFC2O95298 119 aa12.87□□□□□ -0.35
SSH1-209ENST00000551165 COX6CP09669 75 aa12.87□□□□□ -0.35
SSH1-209ENST00000551165 GAGE2EQ4V326 116 aa12.87□□□□□ -0.35
SSH1-209ENST00000551165 GAGE2DQ9UEU5 116 aa12.87□□□□□ -0.35
SSH1-209ENST00000551165 F8W1H4 67 aa12.86□□□□□ -0.35
SSH1-209ENST00000551165 NDUFC2-KCTD14E9PQ53 114 aa12.85□□□□□ -0.35
SSH1-209ENST00000551165 RPL28P46779 137 aaKnown RBP12.85□□□□□ -0.35
SSH1-209ENST00000551165 ATXN8Q156A1 80 aa12.85□□□□□ -0.35
SSH1-209ENST00000551165 MUC7Q8TAX7 377 aa12.84□□□□□ -0.35
SSH1-209ENST00000551165 CARD19Q96LW7 228 aa12.84□□□□□ -0.35
SSH1-209ENST00000551165 FAM218AQ96MZ4 157 aa12.84□□□□□ -0.35
SSH1-209ENST00000551165 NBDYA0A0U1RRE5 68 aa12.84□□□□□ -0.35
SSH1-209ENST00000551165 C9JAW5 83 aa12.84□□□□□ -0.35
SSH1-209ENST00000551165 LST1O00453 97 aa12.83□□□□□ -0.36
SSH1-209ENST00000551165 LINC01620Q4KN68 170 aa12.83□□□□□ -0.36
SSH1-209ENST00000551165 M0R2N4 97 aa12.82□□□□□ -0.36
SSH1-209ENST00000551165 RPL18AQ02543 176 aaKnown RBP12.82□□□□□ -0.36
SSH1-209ENST00000551165 ETDBQ3ZM63 59 aa12.82□□□□□ -0.36
SSH1-209ENST00000551165 F8WDY8 70 aa12.81□□□□□ -0.36
SSH1-209ENST00000551165 PSCAO43653 123 aa12.81□□□□□ -0.36
SSH1-209ENST00000551165 C9orf129Q5T035 196 aaKnown RBP12.8□□□□□ -0.36
SSH1-209ENST00000551165 KMT2AQ03164 3969 aa12.8□□□□□ -0.36
SSH1-209ENST00000551165 SLC25A20O43772 301 aa12.78□□□□□ -0.36
SSH1-209ENST00000551165 VPREB1P12018 145 aa12.78□□□□□ -0.36
SSH1-209ENST00000551165 OCIAD2Q56VL3 154 aa12.77□□□□□ -0.36
SSH1-209ENST00000551165 TMEM126AQ9H061 195 aa12.77□□□□□ -0.36
SSH1-209ENST00000551165 S100A7L2Q5SY68 101 aa12.77□□□□□ -0.37
SSH1-209ENST00000551165 TTC32Q5I0X7 151 aa12.76□□□□□ -0.37
SSH1-209ENST00000551165 A0A087WYN8 130 aa12.75□□□□□ -0.37
SSH1-209ENST00000551165 RNF151Q2KHN1 245 aa12.75□□□□□ -0.37
SSH1-209ENST00000551165 Q6ZRN7 208 aaPredicted RBP12.75□□□□□ -0.37
SSH1-209ENST00000551165 TRBV10-3A0A0K0K1G6 114 aa12.74□□□□□ -0.37
SSH1-209ENST00000551165 IGLV6-57P01721 117 aa12.74□□□□□ -0.37
SSH1-209ENST00000551165 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.73□□□□□ -0.37
SSH1-209ENST00000551165 TLX1NBP0CAT3 122 aa12.73□□□□□ -0.37
SSH1-209ENST00000551165 SERTAD4-AS1Q5TG53 156 aa12.73□□□□□ -0.37
SSH1-209ENST00000551165 TRBV10-2A0A0K0K1G8 114 aa12.73□□□□□ -0.37
SSH1-209ENST00000551165 FAM168BA1KXE4 195 aa12.72□□□□□ -0.37
SSH1-209ENST00000551165 LRCOL1A6NCL2 159 aa12.72□□□□□ -0.37
SSH1-209ENST00000551165 GAGE2BQ13066 116 aa12.72□□□□□ -0.37
SSH1-209ENST00000551165 C6orf99Q4VX62 202 aa12.71□□□□□ -0.37
SSH1-209ENST00000551165 ANKRD29Q8N6D5 301 aa12.71□□□□□ -0.37
SSH1-209ENST00000551165 DNAH2Q9P225 4427 aa12.69□□□□□ -0.38
SSH1-209ENST00000551165 KRTAP7-1Q8IUC3 87 aa12.69□□□□□ -0.38
SSH1-209ENST00000551165 H0YGX0 51 aa12.68□□□□□ -0.38
SSH1-209ENST00000551165 TRACP01848 142 aa12.68□□□□□ -0.38
SSH1-209ENST00000551165 TEN1Q86WV5 123 aa12.67□□□□□ -0.38
SSH1-209ENST00000551165 WWC2-AS2Q96NR7 200 aa12.67□□□□□ -0.38
SSH1-209ENST00000551165 M0R378 163 aa12.66□□□□□ -0.38
SSH1-209ENST00000551165 CNBPP62633 177 aaKnown RBP12.66□□□□□ -0.38
SSH1-209ENST00000551165 Q6ZR54 194 aa12.66□□□□□ -0.38
SSH1-209ENST00000551165 LOC107984640A0A0U1RRK4 108 aa12.65□□□□□ -0.38
SSH1-209ENST00000551165 TRAV23DV6A0A075B6W5 121 aa12.65□□□□□ -0.38
SSH1-209ENST00000551165 LY6G6CO95867 125 aa12.65□□□□□ -0.38
SSH1-209ENST00000551165 LINC01600Q96MT4 127 aa12.64□□□□□ -0.39
SSH1-209ENST00000551165 K7ERU9 68 aa12.63□□□□□ -0.39
SSH1-209ENST00000551165 M0QXV9 152 aa12.63□□□□□ -0.39
SSH1-209ENST00000551165 C22orf24Q9Y442 160 aa12.63□□□□□ -0.39
SSH1-209ENST00000551165 A0A096LNI7 61 aa12.63□□□□□ -0.39
SSH1-209ENST00000551165 H3BT86 120 aa12.63□□□□□ -0.39
SSH1-209ENST00000551165 C7orf33Q8WU49 177 aa12.63□□□□□ -0.39
SSH1-209ENST00000551165 TEX49A0A1B0GTD5 131 aa12.62□□□□□ -0.39
SSH1-209ENST00000551165 IGKV2-24A0A0C4DH68 120 aa12.62□□□□□ -0.39
SSH1-209ENST00000551165 BAALC-AS2P0C853 105 aa12.62□□□□□ -0.39
SSH1-209ENST00000551165 FUSP35637 526 aaKnown RBP eCLIP12.61□□□□□ -0.39
SSH1-209ENST00000551165 C14orf177Q52M58 125 aa12.61□□□□□ -0.39
SSH1-209ENST00000551165 FAM19A5Q7Z5A7 132 aaPredicted RBP12.61□□□□□ -0.39
SSH1-209ENST00000551165 NKAPP1Q8N9T2 125 aa12.61□□□□□ -0.39
SSH1-209ENST00000551165 ZNF73O43830 326 aaPredicted RBP12.6□□□□□ -0.39
SSH1-209ENST00000551165 PLA2G2DQ9UNK4 145 aa12.59□□□□□ -0.39
SSH1-209ENST00000551165 Q8N814 137 aa12.59□□□□□ -0.39
SSH1-209ENST00000551165 RPL37AP8A6NKH3 93 aa12.58□□□□□ -0.4
SSH1-209ENST00000551165 DNAL4O96015 105 aa12.58□□□□□ -0.4
SSH1-209ENST00000551165 PPDPFLQ8WWR9 84 aa12.58□□□□□ -0.4
SSH1-209ENST00000551165 CHTF8P0CG12 524 aa12.58□□□□□ -0.4
SSH1-209ENST00000551165 LINC00575Q6W349 94 aa12.57□□□□□ -0.4
SSH1-209ENST00000551165 LINC00476Q8WZB0 136 aa12.57□□□□□ -0.4
SSH1-209ENST00000551165 DIRC1Q969H9 104 aa12.57□□□□□ -0.4
SSH1-209ENST00000551165 A0A087WTM6 91 aa12.56□□□□□ -0.4
SSH1-209ENST00000551165 C16orf90A8MZG2 172 aa12.56□□□□□ -0.4
SSH1-209ENST00000551165 A0A1W2PNN7 141 aa12.56□□□□□ -0.4
SSH1-209ENST00000551165 IGLV5-37A0A075B6J1 123 aa12.55□□□□□ -0.4
SSH1-209ENST00000551165 C9orf163Q8N9P6 203 aa12.55□□□□□ -0.4
SSH1-209ENST00000551165 LINC00167Q96N53 147 aa12.55□□□□□ -0.4
SSH1-209ENST00000551165 HYDINQ4G0P3 5121 aa12.54□□□□□ -0.4
SSH1-209ENST00000551165 KCNQ1DNQ9H478 68 aa12.52□□□□□ -0.4
SSH1-209ENST00000551165 COX7BP24311 80 aa12.52□□□□□ -0.41
SSH1-209ENST00000551165 ELOF1P60002 83 aaKnown RBP12.52□□□□□ -0.41
SSH1-209ENST00000551165 HECTD4Q9Y4D8 3996 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms