RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 NKX6-2Q9C056 277 aaPredicted RBP1.19□□□□□ -2.22
SNHG1-224ENST00000545688 UBE2D4Q9Y2X8 147 aa1.19□□□□□ -2.22
SNHG1-224ENST00000545688 HSPB11Q9Y547 144 aa1.19□□□□□ -2.22
SNHG1-224ENST00000545688 A0A1W2PPV4 95 aa1.18□□□□□ -2.22
SNHG1-224ENST00000545688 A8MWL6 223 aa1.18□□□□□ -2.22
SNHG1-224ENST00000545688 FAM25EA8MYX2 175 aa1.18□□□□□ -2.22
SNHG1-224ENST00000545688 INMT-MINDY4F8WBC2 141 aa1.18□□□□□ -2.22
SNHG1-224ENST00000545688 I3L3M4 83 aa1.18□□□□□ -2.22
SNHG1-224ENST00000545688 PLA2G10O15496 165 aa1.18□□□□□ -2.22
SNHG1-224ENST00000545688 SLC25A20O43772 301 aa1.18□□□□□ -2.22
SNHG1-224ENST00000545688 CXorf1O96002 111 aa1.18□□□□□ -2.22
SNHG1-224ENST00000545688 MGPP08493 103 aa1.18□□□□□ -2.22
SNHG1-224ENST00000545688 ATP6V0CP27449 155 aa1.18□□□□□ -2.22
SNHG1-224ENST00000545688 RPL37P61927 97 aaKnown RBP1.18□□□□□ -2.22
SNHG1-224ENST00000545688 SERF2P84101 59 aa1.18□□□□□ -2.22
SNHG1-224ENST00000545688 KRTAP5-10Q6L8G5 202 aa1.18□□□□□ -2.22
SNHG1-224ENST00000545688 C9orf62Q8N4C0 152 aa1.18□□□□□ -2.22
SNHG1-224ENST00000545688 ORAOV1Q8WV07 137 aa1.18□□□□□ -2.22
SNHG1-224ENST00000545688 RPL39LQ96EH5 51 aaKnown RBP1.18□□□□□ -2.22
SNHG1-224ENST00000545688 BTF3L4Q96K17 158 aa1.18□□□□□ -2.22
SNHG1-224ENST00000545688 SPRR4Q96PI1 79 aa1.18□□□□□ -2.22
SNHG1-224ENST00000545688 TCEAL7Q9BRU2 100 aa1.18□□□□□ -2.22
SNHG1-224ENST00000545688 PSMG3Q9BT73 122 aaPredicted RBP1.18□□□□□ -2.22
SNHG1-224ENST00000545688 TIMM21Q9BVV7 248 aa1.18□□□□□ -2.22
SNHG1-224ENST00000545688 GNB1LQ9BYB4 327 aa1.18□□□□□ -2.22
SNHG1-224ENST00000545688 RNASE7Q9H1E1 156 aaKnown RBP1.18□□□□□ -2.22
SNHG1-224ENST00000545688 Q9H521 79 aa1.18□□□□□ -2.22
SNHG1-224ENST00000545688 TNFSF18Q9UNG2 199 aa1.18□□□□□ -2.22
SNHG1-224ENST00000545688 ALG5Q9Y673 324 aa1.18□□□□□ -2.22
SNHG1-224ENST00000545688 TRAV13-1A0A0B4J241 112 aa1.17□□□□□ -2.22
SNHG1-224ENST00000545688 F2Z2F3 143 aa1.17□□□□□ -2.22
SNHG1-224ENST00000545688 M0R378 163 aa1.17□□□□□ -2.22
SNHG1-224ENST00000545688 SIX6O95475 246 aa1.17□□□□□ -2.22
SNHG1-224ENST00000545688 TRGC1P0CF51 173 aa1.17□□□□□ -2.22
SNHG1-224ENST00000545688 H2BFSP57053 126 aa1.17□□□□□ -2.22
SNHG1-224ENST00000545688 DEFA3P59666 94 aa1.17□□□□□ -2.22
SNHG1-224ENST00000545688 PRLHP81277 87 aa1.17□□□□□ -2.22
SNHG1-224ENST00000545688 MRPS36P82909 103 aaKnown RBP1.17□□□□□ -2.22
SNHG1-224ENST00000545688 PDZD11Q5EBL8 140 aa1.17□□□□□ -2.22
SNHG1-224ENST00000545688 LYZL1Q6UWQ5 148 aa1.17□□□□□ -2.22
SNHG1-224ENST00000545688 C2orf82Q6UX34 121 aa1.17□□□□□ -2.22
SNHG1-224ENST00000545688 SSBP3-AS1Q7Z2R9 100 aa1.17□□□□□ -2.22
SNHG1-224ENST00000545688 BAGE2Q86Y30 109 aa1.17□□□□□ -2.22
SNHG1-224ENST00000545688 CBLN2Q8IUK8 224 aa1.17□□□□□ -2.22
SNHG1-224ENST00000545688 ORMDL3Q8N138 153 aa1.17□□□□□ -2.22
SNHG1-224ENST00000545688 ENKURQ8TC29 256 aa1.17□□□□□ -2.22
SNHG1-224ENST00000545688 SCGB1C1Q8TD33 95 aa1.17□□□□□ -2.22
SNHG1-224ENST00000545688 PPP1R1CQ8WVI7 109 aa1.17□□□□□ -2.22
SNHG1-224ENST00000545688 MRAP2Q96G30 205 aa1.17□□□□□ -2.22
SNHG1-224ENST00000545688 GEMIN7Q9H840 131 aaKnown RBP1.17□□□□□ -2.22
SNHG1-224ENST00000545688 XAGE1AQ9HD64 81 aa1.17□□□□□ -2.22
SNHG1-224ENST00000545688 VCX3AQ9NNX9 186 aa1.17□□□□□ -2.22
SNHG1-224ENST00000545688 TMEM242Q9NWH2 141 aa1.17□□□□□ -2.22
SNHG1-224ENST00000545688 NDUFA12Q9UI09 145 aa1.17□□□□□ -2.22
SNHG1-224ENST00000545688 FAM240BA0A1B0GVZ2 78 aa1.16□□□□□ -2.22
SNHG1-224ENST00000545688 C7orf77A4D0Y5 90 aa1.16□□□□□ -2.22
SNHG1-224ENST00000545688 MPC2O95563 127 aa1.16□□□□□ -2.22
SNHG1-224ENST00000545688 MBP02144 154 aa1.16□□□□□ -2.22
SNHG1-224ENST00000545688 S100A9P06702 114 aaKnown RBP1.16□□□□□ -2.22
SNHG1-224ENST00000545688 RPS20P60866 119 aaKnown RBP1.16□□□□□ -2.22
SNHG1-224ENST00000545688 UBE2G1P62253 170 aa1.16□□□□□ -2.22
SNHG1-224ENST00000545688 TEX261Q6UWH6 196 aa1.16□□□□□ -2.22
SNHG1-224ENST00000545688 Q6ZUT4 128 aa1.16□□□□□ -2.22
SNHG1-224ENST00000545688 SMIM3Q9BZL3 60 aa1.16□□□□□ -2.22
SNHG1-224ENST00000545688 ACTR3CQ9C0K3 210 aaPredicted RBP1.16□□□□□ -2.22
SNHG1-224ENST00000545688 TMEM126AQ9H061 195 aa1.16□□□□□ -2.22
SNHG1-224ENST00000545688 CTXND1A0A1B0GTU2 59 aa1.15□□□□□ -2.23
SNHG1-224ENST00000545688 RAB19A4D1S5 217 aa1.15□□□□□ -2.23
SNHG1-224ENST00000545688 CCDC160A6NGH7 325 aa1.15□□□□□ -2.23
SNHG1-224ENST00000545688 TMEM238C9JI98 176 aa1.15□□□□□ -2.23
SNHG1-224ENST00000545688 ATP6V1G2O95670 118 aa1.15□□□□□ -2.23
SNHG1-224ENST00000545688 IFNA1P01562 189 aa1.15□□□□□ -2.23
SNHG1-224ENST00000545688 IL7P13232 177 aa1.15□□□□□ -2.23
SNHG1-224ENST00000545688 PMCHP20382 165 aa1.15□□□□□ -2.23
SNHG1-224ENST00000545688 AKR1C3P42330 323 aa1.15□□□□□ -2.23
SNHG1-224ENST00000545688 IFITM3Q01628 133 aa1.15□□□□□ -2.23
SNHG1-224ENST00000545688 FAM19A3Q7Z5A8 133 aa1.15□□□□□ -2.23
SNHG1-224ENST00000545688 SMIM12Q96EX1 92 aa1.15□□□□□ -2.23
SNHG1-224ENST00000545688 C20orf202A1L168 122 aa1.14□□□□□ -2.23
SNHG1-224ENST00000545688 C9orf92A6NGG3 77 aa1.14□□□□□ -2.23
SNHG1-224ENST00000545688 LYRM1O43325 122 aa1.14□□□□□ -2.23
SNHG1-224ENST00000545688 RAB4AP20338 218 aa1.14□□□□□ -2.23
SNHG1-224ENST00000545688 SPRR1AP35321 89 aa1.14□□□□□ -2.23
SNHG1-224ENST00000545688 Q5XG85 94 aa1.14□□□□□ -2.23
SNHG1-224ENST00000545688 FAM104BQ5XKR9 115 aa1.14□□□□□ -2.23
SNHG1-224ENST00000545688 FAM19A1Q7Z5A9 133 aa1.14□□□□□ -2.23
SNHG1-224ENST00000545688 Q8IZM0 81 aa1.14□□□□□ -2.23
SNHG1-224ENST00000545688 STOML3Q8TAV4 291 aa1.14□□□□□ -2.23
SNHG1-224ENST00000545688 MBD3L1Q8WWY6 194 aa1.14□□□□□ -2.23
SNHG1-224ENST00000545688 C20orf166-AS1Q96NR2 134 aa1.14□□□□□ -2.23
SNHG1-224ENST00000545688 ST20Q9HBF5 79 aa1.14□□□□□ -2.23
SNHG1-224ENST00000545688 TRBV20OR9-2A0A075B6H5 130 aa1.13□□□□□ -2.23
SNHG1-224ENST00000545688 TRBV24-1A0A075B6N3 115 aa1.13□□□□□ -2.23
SNHG1-224ENST00000545688 TGIF2-C20orf24A0A0A6YYL0 155 aa1.13□□□□□ -2.23
SNHG1-224ENST00000545688 MAP1LC3B2A6NCE7 125 aa1.13□□□□□ -2.23
SNHG1-224ENST00000545688 A6NDN8 102 aa1.13□□□□□ -2.23
SNHG1-224ENST00000545688 CENPXA8MT69 81 aa1.13□□□□□ -2.23
SNHG1-224ENST00000545688 F8VRH5 84 aa1.13□□□□□ -2.23
SNHG1-224ENST00000545688 RPL35P42766 123 aaKnown RBP1.13□□□□□ -2.23
SNHG1-224ENST00000545688 RPL39P62891 51 aaKnown RBP1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms