RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 A0A096LNI7 61 aa6.85□□□□□ -1.31
DDB1-221ENST00000543162 A4D1N5 150 aa6.85□□□□□ -1.31
DDB1-221ENST00000543162 C16orf90A8MZG2 172 aa6.85□□□□□ -1.31
DDB1-221ENST00000543162 FXYD2P54710 66 aa6.85□□□□□ -1.31
DDB1-221ENST00000543162 BVES-AS1Q5T3Y7 98 aa6.85□□□□□ -1.31
DDB1-221ENST00000543162 DNAH2Q9P225 4427 aa6.84□□□□□ -1.31
DDB1-221ENST00000543162 IGKV2-24A0A0C4DH68 120 aa6.84□□□□□ -1.31
DDB1-221ENST00000543162 BATFQ16520 125 aa6.84□□□□□ -1.31
DDB1-221ENST00000543162 C9orf129Q5T035 196 aaKnown RBP6.84□□□□□ -1.31
DDB1-221ENST00000543162 LINC00474Q9P2X8 69 aa6.83□□□□□ -1.32
DDB1-221ENST00000543162 KMT2CQ8NEZ4 4911 aaKnown RBP6.83□□□□□ -1.32
DDB1-221ENST00000543162 RYR2Q92736 4967 aa6.82□□□□□ -1.32
DDB1-221ENST00000543162 DNAH17Q9UFH2 4485 aa6.82□□□□□ -1.32
DDB1-221ENST00000543162 NDUFC2O95298 119 aa6.82□□□□□ -1.32
DDB1-221ENST00000543162 CHTF8P0CG12 524 aa6.82□□□□□ -1.32
DDB1-221ENST00000543162 A6NDN8 102 aa6.81□□□□□ -1.32
DDB1-221ENST00000543162 Q8NDZ9 215 aa6.81□□□□□ -1.32
DDB1-221ENST00000543162 DPH3Q96FX2 82 aa6.81□□□□□ -1.32
DDB1-221ENST00000543162 SNHG12Q9BXW3 62 aa6.81□□□□□ -1.32
DDB1-221ENST00000543162 NHP2Q9NX24 153 aaKnown RBP6.81□□□□□ -1.32
DDB1-221ENST00000543162 PLA2G2DQ9UNK4 145 aa6.81□□□□□ -1.32
DDB1-221ENST00000543162 A0A1B0GVY2 172 aa6.8□□□□□ -1.32
DDB1-221ENST00000543162 FAM168BA1KXE4 195 aa6.8□□□□□ -1.32
DDB1-221ENST00000543162 NCR3O14931 201 aa6.8□□□□□ -1.32
DDB1-221ENST00000543162 CFC1BP0CG36 223 aa6.8□□□□□ -1.32
DDB1-221ENST00000543162 CFC1P0CG37 223 aa6.8□□□□□ -1.32
DDB1-221ENST00000543162 VPREB1P12018 145 aa6.8□□□□□ -1.32
DDB1-221ENST00000543162 PRR3P79522 188 aaKnown RBP6.8□□□□□ -1.32
DDB1-221ENST00000543162 IGKV2-28A0A075B6P5 120 aa6.79□□□□□ -1.32
DDB1-221ENST00000543162 A0A0B4J2C4 111 aa6.79□□□□□ -1.32
DDB1-221ENST00000543162 IGKV2D-28P01615 120 aa6.79□□□□□ -1.32
DDB1-221ENST00000543162 SERTAD4-AS1Q5TG53 156 aa6.79□□□□□ -1.32
DDB1-221ENST00000543162 FAM19A5Q7Z5A7 132 aaPredicted RBP6.79□□□□□ -1.32
DDB1-221ENST00000543162 NKAPP1Q8N9T2 125 aa6.79□□□□□ -1.32
DDB1-221ENST00000543162 SPACA4Q8TDM5 124 aa6.79□□□□□ -1.32
DDB1-221ENST00000543162 RAB37Q96AX2 223 aa6.79□□□□□ -1.32
DDB1-221ENST00000543162 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.79□□□□□ -1.32
DDB1-221ENST00000543162 FRAS1Q86XX4 4008 aa6.79□□□□□ -1.32
DDB1-221ENST00000543162 TRAV13-2A0A0B4J235 113 aa6.78□□□□□ -1.32
DDB1-221ENST00000543162 TRBV10-2A0A0K0K1G8 114 aa6.78□□□□□ -1.32
DDB1-221ENST00000543162 A0A1B0GWB2 263 aa6.78□□□□□ -1.32
DDB1-221ENST00000543162 PANO1I0J062 215 aa6.78□□□□□ -1.32
DDB1-221ENST00000543162 K7ERJ3 54 aa6.78□□□□□ -1.32
DDB1-221ENST00000543162 IGLV5-37A0A075B6J1 123 aa6.77□□□□□ -1.33
DDB1-221ENST00000543162 A0A1W2PNN7 141 aa6.77□□□□□ -1.33
DDB1-221ENST00000543162 M0R378 163 aa6.77□□□□□ -1.33
DDB1-221ENST00000543162 KRTAP10-1P60331 282 aa6.77□□□□□ -1.33
DDB1-221ENST00000543162 LINC00337Q8N6G1 96 aa6.77□□□□□ -1.33
DDB1-221ENST00000543162 OR13C6PQ8NH95 151 aa6.77□□□□□ -1.33
DDB1-221ENST00000543162 PRO1854Q9UHT4 67 aa6.77□□□□□ -1.33
DDB1-221ENST00000543162 M0QXV9 152 aa6.76□□□□□ -1.33
DDB1-221ENST00000543162 RPL13AP40429 203 aaKnown RBP6.76□□□□□ -1.33
DDB1-221ENST00000543162 S100A7L2Q5SY68 101 aa6.76□□□□□ -1.33
DDB1-221ENST00000543162 KRTAP7-1Q8IUC3 87 aa6.76□□□□□ -1.33
DDB1-221ENST00000543162 C22orf24Q9Y442 160 aa6.76□□□□□ -1.33
DDB1-221ENST00000543162 A0A087WYN8 130 aa6.75□□□□□ -1.33
DDB1-221ENST00000543162 GAGE10A6NGK3 116 aa6.75□□□□□ -1.33
DDB1-221ENST00000543162 H7C2G1 150 aa6.75□□□□□ -1.33
DDB1-221ENST00000543162 COL5A1-AS1Q5SY13 56 aa6.75□□□□□ -1.33
DDB1-221ENST00000543162 MRPL55Q7Z7F7 128 aaKnown RBP6.75□□□□□ -1.33
DDB1-221ENST00000543162 C7orf33Q8WU49 177 aa6.75□□□□□ -1.33
DDB1-221ENST00000543162 TMEM126AQ9H061 195 aa6.75□□□□□ -1.33
DDB1-221ENST00000543162 FAT2Q9NYQ8 4349 aa6.74□□□□□ -1.33
DDB1-221ENST00000543162 LBHQ53QV2 105 aaPredicted RBP6.74□□□□□ -1.33
DDB1-221ENST00000543162 FAM30AQ9NZY2 134 aa6.74□□□□□ -1.33
DDB1-221ENST00000543162 TRBV10-3A0A0K0K1G6 114 aa6.73□□□□□ -1.33
DDB1-221ENST00000543162 IGLV6-57P01721 117 aa6.73□□□□□ -1.33
DDB1-221ENST00000543162 Q1RN00 199 aa6.73□□□□□ -1.33
DDB1-221ENST00000543162 Q6ZSA8 131 aa6.73□□□□□ -1.33
DDB1-221ENST00000543162 LINC00167Q96N53 147 aa6.73□□□□□ -1.33
DDB1-221ENST00000543162 PLAC8Q9NZF1 115 aa6.73□□□□□ -1.33
DDB1-221ENST00000543162 RPL37AP8A6NKH3 93 aa6.72□□□□□ -1.33
DDB1-221ENST00000543162 EPM2AB3EWF7 344 aa6.72□□□□□ -1.33
DDB1-221ENST00000543162 PHF5AQ7RTV0 110 aaKnown RBP6.72□□□□□ -1.33
DDB1-221ENST00000543162 TAX1BP3O14907 124 aa6.71□□□□□ -1.34
DDB1-221ENST00000543162 TSPAN13O95857 204 aa6.71□□□□□ -1.34
DDB1-221ENST00000543162 CBY1Q9Y3M2 126 aa6.71□□□□□ -1.34
DDB1-221ENST00000543162 PKD1P98161 4303 aa6.7□□□□□ -1.34
DDB1-221ENST00000543162 DNAH11Q96DT5 4516 aa6.7□□□□□ -1.34
DDB1-221ENST00000543162 IGLV1-50A0A075B6I6 118 aa6.7□□□□□ -1.34
DDB1-221ENST00000543162 TRAV23DV6A0A075B6W5 121 aa6.7□□□□□ -1.34
DDB1-221ENST00000543162 UBE2BP63146 152 aa6.7□□□□□ -1.34
DDB1-221ENST00000543162 SCXQ7RTU7 201 aa6.7□□□□□ -1.34
DDB1-221ENST00000543162 CIRBP-AS1Q8TBR5 109 aa6.7□□□□□ -1.34
DDB1-221ENST00000543162 SMIM11BQ8TCY0 68 aa6.7□□□□□ -1.34
DDB1-221ENST00000543162 HECTD4Q9Y4D8 3996 aa6.7□□□□□ -1.34
DDB1-221ENST00000543162 RYR3Q15413 4870 aa6.7□□□□□ -1.34
DDB1-221ENST00000543162 PSMB2P49721 201 aa6.69□□□□□ -1.34
DDB1-221ENST00000543162 NAA38Q9BRA0 125 aaKnown RBP6.69□□□□□ -1.34
DDB1-221ENST00000543162 KCNQ1DNQ9H478 68 aa6.69□□□□□ -1.34
DDB1-221ENST00000543162 C9orf118A6NHY6 69 aa6.68□□□□□ -1.34
DDB1-221ENST00000543162 PRYO14603 147 aa6.68□□□□□ -1.34
DDB1-221ENST00000543162 RPL28P46779 137 aaKnown RBP6.68□□□□□ -1.34
DDB1-221ENST00000543162 HAMPP81172 84 aa6.68□□□□□ -1.34
DDB1-221ENST00000543162 H3BUT2 72 aa6.67□□□□□ -1.34
DDB1-221ENST00000543162 ZNF73O43830 326 aaPredicted RBP6.67□□□□□ -1.34
DDB1-221ENST00000543162 C6orf99Q4VX62 202 aa6.67□□□□□ -1.34
DDB1-221ENST00000543162 DIRC1Q969H9 104 aa6.67□□□□□ -1.34
DDB1-221ENST00000543162 TRIAP1O43715 76 aa6.66□□□□□ -1.34
DDB1-221ENST00000543162 COX6CP09669 75 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms