RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 COX7A2LO14548 114 aa11.42□□□□□ -0.58
COPS3-212ENST00000539941 HIST1H4AP62805 103 aaKnown RBP11.42□□□□□ -0.58
COPS3-212ENST00000539941 Q9H8V8 135 aa11.42□□□□□ -0.58
COPS3-212ENST00000539941 ZNF625Q96I27 306 aaPredicted RBP11.41□□□□□ -0.58
COPS3-212ENST00000539941 LINC00588Q9Y4M8 146 aa11.41□□□□□ -0.58
COPS3-212ENST00000539941 KMT2CQ8NEZ4 4911 aaKnown RBP11.41□□□□□ -0.58
COPS3-212ENST00000539941 IGLV10-54A0A075B6I4 117 aa11.4□□□□□ -0.58
COPS3-212ENST00000539941 LITAFQ99732 161 aa11.4□□□□□ -0.58
COPS3-212ENST00000539941 UPK3BQ9BT76 320 aa11.4□□□□□ -0.58
COPS3-212ENST00000539941 STAB2Q8WWQ8 2551 aa11.4□□□□□ -0.58
COPS3-212ENST00000539941 LOC107984640A0A0U1RRK4 108 aa11.4□□□□□ -0.59
COPS3-212ENST00000539941 CIRBPQ14011 172 aaKnown RBP11.39□□□□□ -0.59
COPS3-212ENST00000539941 Q8IZM0 81 aa11.39□□□□□ -0.59
COPS3-212ENST00000539941 C2orf48Q96LS8 159 aa11.38□□□□□ -0.59
COPS3-212ENST00000539941 TOMM7Q9P0U1 55 aa11.38□□□□□ -0.59
COPS3-212ENST00000539941 NUPR2A6NF83 97 aa11.37□□□□□ -0.59
COPS3-212ENST00000539941 PRSS2P07478 247 aa11.37□□□□□ -0.59
COPS3-212ENST00000539941 MALP21145 153 aa11.37□□□□□ -0.59
COPS3-212ENST00000539941 WWC2-AS2Q96NR7 200 aa11.37□□□□□ -0.59
COPS3-212ENST00000539941 DYNC2H1Q8NCM8 4307 aaKnown RBP11.36□□□□□ -0.59
COPS3-212ENST00000539941 CLEC2BQ92478 149 aa11.36□□□□□ -0.59
COPS3-212ENST00000539941 DNAH7Q8WXX0 4024 aa11.36□□□□□ -0.59
COPS3-212ENST00000539941 C6orf226Q5I0X4 101 aa11.35□□□□□ -0.59
COPS3-212ENST00000539941 APLNQ9ULZ1 77 aa11.35□□□□□ -0.59
COPS3-212ENST00000539941 KLK5Q9Y337 293 aaPredicted RBP11.35□□□□□ -0.59
COPS3-212ENST00000539941 RPL18AQ02543 176 aaKnown RBP11.34□□□□□ -0.59
COPS3-212ENST00000539941 NDUFC2-KCTD14E9PQ53 114 aa11.33□□□□□ -0.6
COPS3-212ENST00000539941 ADAMTSL4-AS1Q5T5F5 129 aa11.33□□□□□ -0.6
COPS3-212ENST00000539941 SERP2Q8N6R1 65 aa11.33□□□□□ -0.6
COPS3-212ENST00000539941 SMCR5Q8TEV8 140 aa11.33□□□□□ -0.6
COPS3-212ENST00000539941 DPH3Q96FX2 82 aa11.33□□□□□ -0.6
COPS3-212ENST00000539941 C1orf43Q9BWL3 253 aa11.33□□□□□ -0.6
COPS3-212ENST00000539941 KIAA0087Q14695 138 aa11.32□□□□□ -0.6
COPS3-212ENST00000539941 KRTAP26-1Q6PEX3 210 aa11.32□□□□□ -0.6
COPS3-212ENST00000539941 IBA57-AS1B1ANH7 110 aa11.31□□□□□ -0.6
COPS3-212ENST00000539941 Q6JHZ5 121 aa11.3□□□□□ -0.6
COPS3-212ENST00000539941 RYR3Q15413 4870 aa11.29□□□□□ -0.6
COPS3-212ENST00000539941 SPAG11BQ08648 103 aa11.28□□□□□ -0.6
COPS3-212ENST00000539941 IGKV2D-24A0A075B6R9 120 aa11.27□□□□□ -0.6
COPS3-212ENST00000539941 hADV29S1A0JD25 119 aa11.27□□□□□ -0.6
COPS3-212ENST00000539941 UBE2DNLQ8IWF7 75 aa11.27□□□□□ -0.6
COPS3-212ENST00000539941 RMI2Q96E14 147 aa11.27□□□□□ -0.6
COPS3-212ENST00000539941 BAALC-AS2P0C853 105 aa11.27□□□□□ -0.61
COPS3-212ENST00000539941 LINC00308Q8TCZ7 52 aa11.26□□□□□ -0.61
COPS3-212ENST00000539941 NDUFC2O95298 119 aa11.25□□□□□ -0.61
COPS3-212ENST00000539941 A0A0U1RRA0 63 aa11.24□□□□□ -0.61
COPS3-212ENST00000539941 COX17Q14061 63 aa11.24□□□□□ -0.61
COPS3-212ENST00000539941 Q9HAA7 133 aa11.24□□□□□ -0.61
COPS3-212ENST00000539941 LINC00158P58513 81 aa11.24□□□□□ -0.61
COPS3-212ENST00000539941 MIR7-3HGQ8N6C7 128 aa11.24□□□□□ -0.61
COPS3-212ENST00000539941 F8WDY8 70 aa11.22□□□□□ -0.61
COPS3-212ENST00000539941 C3orf84H3BNL1 204 aa11.22□□□□□ -0.61
COPS3-212ENST00000539941 DNAL4O96015 105 aa11.22□□□□□ -0.61
COPS3-212ENST00000539941 NPC2P61916 151 aa11.22□□□□□ -0.61
COPS3-212ENST00000539941 MUC7Q8TAX7 377 aa11.22□□□□□ -0.61
COPS3-212ENST00000539941 GVQW2A0A096LPI5 108 aaPredicted RBP11.21□□□□□ -0.61
COPS3-212ENST00000539941 ZNF561-AS1K7EIQ3 104 aa11.21□□□□□ -0.61
COPS3-212ENST00000539941 S100A7L2Q5SY68 101 aa11.21□□□□□ -0.61
COPS3-212ENST00000539941 C15orf56Q8N910 161 aa11.21□□□□□ -0.61
COPS3-212ENST00000539941 CSMD3Q7Z407 3707 aa11.21□□□□□ -0.61
COPS3-212ENST00000539941 PFN2P35080 140 aa11.2□□□□□ -0.62
COPS3-212ENST00000539941 SOSTDC1Q6X4U4 206 aa11.2□□□□□ -0.62
COPS3-212ENST00000539941 ATP5EP2Q5VTU8 51 aa11.2□□□□□ -0.62
COPS3-212ENST00000539941 C6orf223Q8N319 242 aa11.2□□□□□ -0.62
COPS3-212ENST00000539941 DNAH1Q9P2D7 4330 aa11.19□□□□□ -0.62
COPS3-212ENST00000539941 PLECQ15149 4684 aaKnown RBP11.18□□□□□ -0.62
COPS3-212ENST00000539941 CASC10Q5T4H9 136 aa11.18□□□□□ -0.62
COPS3-212ENST00000539941 UNQ6190/PRO20217Q6UXQ8 127 aa11.18□□□□□ -0.62
COPS3-212ENST00000539941 Q5XG85 94 aa11.17□□□□□ -0.62
COPS3-212ENST00000539941 STARD9Q9P2P6 4700 aa11.17□□□□□ -0.62
COPS3-212ENST00000539941 BCE1O60756 84 aa11.17□□□□□ -0.62
COPS3-212ENST00000539941 HIGD2BQ4VC39 106 aa11.17□□□□□ -0.62
COPS3-212ENST00000539941 C10orf25Q5T742 122 aa11.17□□□□□ -0.62
COPS3-212ENST00000539941 PRO0628Q9UI54 55 aa11.17□□□□□ -0.62
COPS3-212ENST00000539941 SACSQ9NZJ4 4579 aa11.16□□□□□ -0.62
COPS3-212ENST00000539941 TRAV13-2A0A0B4J235 113 aa11.16□□□□□ -0.62
COPS3-212ENST00000539941 CAMK2N2Q96S95 79 aa11.16□□□□□ -0.62
COPS3-212ENST00000539941 USP17L23D6RBM5 183 aa11.15□□□□□ -0.62
COPS3-212ENST00000539941 KRTAP1-5Q9BYS1 174 aa11.15□□□□□ -0.62
COPS3-212ENST00000539941 TENM2Q9NT68 2774 aa11.15□□□□□ -0.62
COPS3-212ENST00000539941 RPL28P46779 137 aaKnown RBP11.14□□□□□ -0.63
COPS3-212ENST00000539941 OBSCN-AS1Q96MR7 158 aa11.14□□□□□ -0.63
COPS3-212ENST00000539941 LYSTQ99698 3801 aa11.14□□□□□ -0.63
COPS3-212ENST00000539941 SND1-IT1Q9HBX3 110 aa11.14□□□□□ -0.63
COPS3-212ENST00000539941 C6orf48Q9UBA6 75 aa11.14□□□□□ -0.63
COPS3-212ENST00000539941 RYR2Q92736 4967 aa11.13□□□□□ -0.63
COPS3-212ENST00000539941 H0YGX0 51 aa11.13□□□□□ -0.63
COPS3-212ENST00000539941 C9orf116Q5BN46 136 aaPredicted RBP11.13□□□□□ -0.63
COPS3-212ENST00000539941 C22orf24Q9Y442 160 aa11.13□□□□□ -0.63
COPS3-212ENST00000539941 NBDYA0A0U1RRE5 68 aa11.12□□□□□ -0.63
COPS3-212ENST00000539941 C4orf26Q17RF5 130 aa11.12□□□□□ -0.63
COPS3-212ENST00000539941 HRCT1Q6UXD1 115 aa11.12□□□□□ -0.63
COPS3-212ENST00000539941 DSCR8Q96T75 97 aa11.12□□□□□ -0.63
COPS3-212ENST00000539941 SERP1Q9Y6X1 66 aa11.12□□□□□ -0.63
COPS3-212ENST00000539941 EPM2AB3EWF7 344 aa11.11□□□□□ -0.63
COPS3-212ENST00000539941 Q6ZRU5 148 aa11.11□□□□□ -0.63
COPS3-212ENST00000539941 TRBV10-3A0A0K0K1G6 114 aa11.1□□□□□ -0.63
COPS3-212ENST00000539941 SYCNQ0VAF6 134 aa11.1□□□□□ -0.63
COPS3-212ENST00000539941 OXTP01178 125 aa11.09□□□□□ -0.63
COPS3-212ENST00000539941 VPS13DQ5THJ4 4388 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms