RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 INAFM1C9JVW0 142 aa8.6□□□□□ -1.03
SFSWAP-208ENST00000539506 Q6JHZ5 121 aa8.6□□□□□ -1.03
SFSWAP-208ENST00000539506 SCXQ7RTU7 201 aa8.6□□□□□ -1.03
SFSWAP-208ENST00000539506 PRO0255Q9UI72 69 aa8.6□□□□□ -1.03
SFSWAP-208ENST00000539506 A0A1B0GUV1 79 aa8.59□□□□□ -1.03
SFSWAP-208ENST00000539506 HAMPP81172 84 aa8.59□□□□□ -1.03
SFSWAP-208ENST00000539506 CCKP06307 115 aa8.58□□□□□ -1.04
SFSWAP-208ENST00000539506 HRCT1Q6UXD1 115 aa8.58□□□□□ -1.04
SFSWAP-208ENST00000539506 Q8N814 137 aa8.58□□□□□ -1.04
SFSWAP-208ENST00000539506 ANK2Q01484 3957 aa8.58□□□□□ -1.04
SFSWAP-208ENST00000539506 LAMTOR3Q9UHA4 124 aa8.58□□□□□ -1.04
SFSWAP-208ENST00000539506 UPK3BQ9BT76 320 aa8.58□□□□□ -1.04
SFSWAP-208ENST00000539506 ANGP03950 147 aaKnown RBP8.57□□□□□ -1.04
SFSWAP-208ENST00000539506 CELA1Q9UNI1 258 aa8.57□□□□□ -1.04
SFSWAP-208ENST00000539506 S100A7L2Q5SY68 101 aa8.57□□□□□ -1.04
SFSWAP-208ENST00000539506 TEP1Q99973 2627 aaKnown RBP8.57□□□□□ -1.04
SFSWAP-208ENST00000539506 HTN3P15516 51 aa8.56□□□□□ -1.04
SFSWAP-208ENST00000539506 C10orf25Q5T742 122 aa8.56□□□□□ -1.04
SFSWAP-208ENST00000539506 OBSCN-AS1Q96MR7 158 aa8.56□□□□□ -1.04
SFSWAP-208ENST00000539506 IGHV4-28A0A0C4DH34 117 aa8.56□□□□□ -1.04
SFSWAP-208ENST00000539506 SNURFQ9Y675 71 aa8.56□□□□□ -1.04
SFSWAP-208ENST00000539506 PKD1L1Q8TDX9 2849 aa8.55□□□□□ -1.04
SFSWAP-208ENST00000539506 KIAA0087Q14695 138 aa8.54□□□□□ -1.04
SFSWAP-208ENST00000539506 C9orf66Q5T8R8 295 aa8.54□□□□□ -1.04
SFSWAP-208ENST00000539506 UNQ6190/PRO20217Q6UXQ8 127 aa8.54□□□□□ -1.04
SFSWAP-208ENST00000539506 F8P00451 2351 aa8.54□□□□□ -1.04
SFSWAP-208ENST00000539506 LYRM9A8MSI8 78 aa8.54□□□□□ -1.04
SFSWAP-208ENST00000539506 Q8IZM0 81 aa8.54□□□□□ -1.04
SFSWAP-208ENST00000539506 C1orf43Q9BWL3 253 aa8.54□□□□□ -1.04
SFSWAP-208ENST00000539506 XAGE1AQ9HD64 81 aa8.54□□□□□ -1.04
SFSWAP-208ENST00000539506 Q8NAQ8 132 aa8.53□□□□□ -1.04
SFSWAP-208ENST00000539506 CHCHD10Q8WYQ3 142 aaPredicted RBP8.53□□□□□ -1.04
SFSWAP-208ENST00000539506 TRAV10A0A0B4J240 114 aa8.52□□□□□ -1.05
SFSWAP-208ENST00000539506 UBL5Q9BZL1 73 aa8.51□□□□□ -1.05
SFSWAP-208ENST00000539506 TMEM256-PLSCR3K7ERE1 68 aa8.51□□□□□ -1.05
SFSWAP-208ENST00000539506 DAD1P61803 113 aa8.5□□□□□ -1.05
SFSWAP-208ENST00000539506 REG3AQ06141 175 aa8.5□□□□□ -1.05
SFSWAP-208ENST00000539506 C4orf48Q5BLP8 95 aa8.5□□□□□ -1.05
SFSWAP-208ENST00000539506 CD164L2Q6UWJ8 174 aa8.5□□□□□ -1.05
SFSWAP-208ENST00000539506 Q6ZQY7 126 aa8.5□□□□□ -1.05
SFSWAP-208ENST00000539506 TMEM258P61165 79 aa8.49□□□□□ -1.05
SFSWAP-208ENST00000539506 RBM3P98179 157 aaKnown RBP8.49□□□□□ -1.05
SFSWAP-208ENST00000539506 RMI2Q96E14 147 aa8.49□□□□□ -1.05
SFSWAP-208ENST00000539506 JMJD7-PLA2G4BH0Y9G9 81 aa8.48□□□□□ -1.05
SFSWAP-208ENST00000539506 APOC4P55056 127 aa8.48□□□□□ -1.05
SFSWAP-208ENST00000539506 Q8N9L7 120 aa8.48□□□□□ -1.05
SFSWAP-208ENST00000539506 CMYA5Q8N3K9 4069 aa8.47□□□□□ -1.05
SFSWAP-208ENST00000539506 IGHV4-30-4P0DP06 118 aa8.47□□□□□ -1.05
SFSWAP-208ENST00000539506 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.46□□□□□ -1.05
SFSWAP-208ENST00000539506 KLK12Q9UKR0 248 aa8.46□□□□□ -1.05
SFSWAP-208ENST00000539506 LINC00575Q6W349 94 aa8.46□□□□□ -1.06
SFSWAP-208ENST00000539506 V9GYY9 64 aa8.45□□□□□ -1.06
SFSWAP-208ENST00000539506 CYSRT1A8MQ03 144 aa8.45□□□□□ -1.06
SFSWAP-208ENST00000539506 MIFP14174 115 aa8.45□□□□□ -1.06
SFSWAP-208ENST00000539506 LINC01547P58512 204 aaPredicted RBP8.45□□□□□ -1.06
SFSWAP-208ENST00000539506 Q5XG85 94 aa8.45□□□□□ -1.06
SFSWAP-208ENST00000539506 SPAG11BQ08648 103 aa8.44□□□□□ -1.06
SFSWAP-208ENST00000539506 Q6ZQT0 140 aa8.44□□□□□ -1.06
SFSWAP-208ENST00000539506 Q6ZVQ6 151 aa8.44□□□□□ -1.06
SFSWAP-208ENST00000539506 RPS28P62857 69 aaKnown RBP8.44□□□□□ -1.06
SFSWAP-208ENST00000539506 HIGD2BQ4VC39 106 aa8.44□□□□□ -1.06
SFSWAP-208ENST00000539506 TRBV10-3A0A0K0K1G6 114 aa8.43□□□□□ -1.06
SFSWAP-208ENST00000539506 FBN1P35555 2871 aaKnown RBP8.43□□□□□ -1.06
SFSWAP-208ENST00000539506 SPART-AS1P0CW21 52 aa8.43□□□□□ -1.06
SFSWAP-208ENST00000539506 COX17Q14061 63 aa8.43□□□□□ -1.06
SFSWAP-208ENST00000539506 LELP1Q5T871 98 aa8.42□□□□□ -1.06
SFSWAP-208ENST00000539506 TM2D3Q9BRN9 247 aa8.42□□□□□ -1.06
SFSWAP-208ENST00000539506 LINC00167Q96N53 147 aa8.42□□□□□ -1.06
SFSWAP-208ENST00000539506 TENM3Q9P273 2699 aa8.42□□□□□ -1.06
SFSWAP-208ENST00000539506 PRR34Q9NV39 138 aa8.41□□□□□ -1.06
SFSWAP-208ENST00000539506 FAM236DA0A1B0GTK5 79 aa8.41□□□□□ -1.06
SFSWAP-208ENST00000539506 NDUFC2O95298 119 aa8.41□□□□□ -1.06
SFSWAP-208ENST00000539506 FAM236CP0DP71 79 aa8.41□□□□□ -1.06
SFSWAP-208ENST00000539506 RETNQ9HD89 108 aa8.41□□□□□ -1.06
SFSWAP-208ENST00000539506 BAHCC1Q9P281 2608 aa8.4□□□□□ -1.06
SFSWAP-208ENST00000539506 F8WEM9 126 aa8.4□□□□□ -1.06
SFSWAP-208ENST00000539506 LYPD5Q6UWN5 251 aa8.4□□□□□ -1.07
SFSWAP-208ENST00000539506 ZNF561-AS1K7EIQ3 104 aa8.39□□□□□ -1.07
SFSWAP-208ENST00000539506 H7BZZ5 65 aa8.39□□□□□ -1.07
SFSWAP-208ENST00000539506 DEFB105AQ8NG35 78 aa8.39□□□□□ -1.07
SFSWAP-208ENST00000539506 KRTAP10-11P60412 298 aa8.38□□□□□ -1.07
SFSWAP-208ENST00000539506 LINC00474Q9P2X8 69 aa8.38□□□□□ -1.07
SFSWAP-208ENST00000539506 PRO0628Q9UI54 55 aa8.37□□□□□ -1.07
SFSWAP-208ENST00000539506 PKIGQ9Y2B9 76 aa8.37□□□□□ -1.07
SFSWAP-208ENST00000539506 A0A0J9YWU9 116 aa8.36□□□□□ -1.07
SFSWAP-208ENST00000539506 WFDC10BQ8IUB3 73 aa8.36□□□□□ -1.07
SFSWAP-208ENST00000539506 C3orf84H3BNL1 204 aa8.36□□□□□ -1.07
SFSWAP-208ENST00000539506 MUC7Q8TAX7 377 aa8.36□□□□□ -1.07
SFSWAP-208ENST00000539506 C6orf48Q9UBA6 75 aa8.35□□□□□ -1.07
SFSWAP-208ENST00000539506 DNAH3Q8TD57 4116 aa8.35□□□□□ -1.07
SFSWAP-208ENST00000539506 BPY2O14599 106 aa8.35□□□□□ -1.07
SFSWAP-208ENST00000539506 ATP5EP2Q5VTU8 51 aa8.35□□□□□ -1.07
SFSWAP-208ENST00000539506 STAB1Q9NY15 2570 aa8.35□□□□□ -1.07
SFSWAP-208ENST00000539506 LINC00336Q6ZUF6 198 aa8.34□□□□□ -1.07
SFSWAP-208ENST00000539506 TRAV7A0A075B6U4 112 aa8.34□□□□□ -1.08
SFSWAP-208ENST00000539506 KRTAP26-1Q6PEX3 210 aa8.33□□□□□ -1.08
SFSWAP-208ENST00000539506 Q6ZTC4 211 aa8.33□□□□□ -1.08
SFSWAP-208ENST00000539506 DIRC1Q969H9 104 aa8.33□□□□□ -1.08
SFSWAP-208ENST00000539506 ZNF73O43830 326 aaPredicted RBP8.33□□□□□ -1.08
SFSWAP-208ENST00000539506 KPRPQ5T749 579 aaPredicted RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms