RNA–Protein interactions for RNA: ENST00000539212.5

PDCD2-207, Transcript of programmed cell death 2, humanhuman

TSL 3

Gene PDCD2, Length 445 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-207ENST00000539212 IFITM2Q01629 132 aa9.97□□□□□ -0.81
PDCD2-207ENST00000539212 C3orf22Q8N5N4 141 aa9.97□□□□□ -0.81
PDCD2-207ENST00000539212 IGKV2D-26A0A0A0MRZ7 120 aa9.96□□□□□ -0.82
PDCD2-207ENST00000539212 SEC11CQ9BY50 192 aa9.96□□□□□ -0.82
PDCD2-207ENST00000539212 TMA7Q9Y2S6 64 aaKnown RBP9.96□□□□□ -0.82
PDCD2-207ENST00000539212 C11orf86A6NJI1 115 aa9.95□□□□□ -0.82
PDCD2-207ENST00000539212 KRTAP9-2Q9BYQ4 174 aa9.95□□□□□ -0.82
PDCD2-207ENST00000539212 COX19Q49B96 90 aa9.93□□□□□ -0.82
PDCD2-207ENST00000539212 C18orf32Q8TCD1 76 aa9.93□□□□□ -0.82
PDCD2-207ENST00000539212 PLEKHB2Q96CS7 222 aa9.93□□□□□ -0.82
PDCD2-207ENST00000539212 HBDP02042 147 aa9.92□□□□□ -0.82
PDCD2-207ENST00000539212 RPL24P83731 157 aaKnown RBP9.92□□□□□ -0.82
PDCD2-207ENST00000539212 COMMD7Q86VX2 200 aa9.92□□□□□ -0.82
PDCD2-207ENST00000539212 RPS10P5Q9NQ39 176 aa9.92□□□□□ -0.82
PDCD2-207ENST00000539212 IGLV7-46A0A075B6I9 117 aa9.91□□□□□ -0.82
PDCD2-207ENST00000539212 A0A0U1RRA0 63 aa9.91□□□□□ -0.82
PDCD2-207ENST00000539212 COX17Q14061 63 aa9.91□□□□□ -0.82
PDCD2-207ENST00000539212 TMEM170BQ5T4T1 132 aa9.91□□□□□ -0.82
PDCD2-207ENST00000539212 CBLN2Q8IUK8 224 aa9.91□□□□□ -0.82
PDCD2-207ENST00000539212 HIGD2AQ9BW72 106 aa9.91□□□□□ -0.82
PDCD2-207ENST00000539212 CDIP1Q9H305 208 aa9.91□□□□□ -0.82
PDCD2-207ENST00000539212 LINC00614P0C842 121 aa9.9□□□□□ -0.82
PDCD2-207ENST00000539212 TPRXLQ17RH7 258 aa9.9□□□□□ -0.82
PDCD2-207ENST00000539212 BAGE3Q86Y29 109 aa9.89□□□□□ -0.83
PDCD2-207ENST00000539212 TRAPPC1Q9Y5R8 145 aa9.89□□□□□ -0.83
PDCD2-207ENST00000539212 C10orf91Q5T1B1 145 aa9.88□□□□□ -0.83
PDCD2-207ENST00000539212 LINC00158P58513 81 aa9.87□□□□□ -0.83
PDCD2-207ENST00000539212 RHEBQ15382 184 aa9.87□□□□□ -0.83
PDCD2-207ENST00000539212 SPRR4Q96PI1 79 aa9.87□□□□□ -0.83
PDCD2-207ENST00000539212 PPDPFQ9H3Y8 114 aa9.85□□□□□ -0.83
PDCD2-207ENST00000539212 CHTOPQ9Y3Y2 248 aaKnown RBP9.85□□□□□ -0.83
PDCD2-207ENST00000539212 TMEM223A0PJW6 202 aa9.83□□□□□ -0.84
PDCD2-207ENST00000539212 NCR3O14931 201 aa9.83□□□□□ -0.84
PDCD2-207ENST00000539212 SMIM13P0DJ93 91 aa9.83□□□□□ -0.84
PDCD2-207ENST00000539212 DAND5Q8N907 189 aa9.83□□□□□ -0.84
PDCD2-207ENST00000539212 SFTA2Q6UW10 78 aa9.82□□□□□ -0.84
PDCD2-207ENST00000539212 BOD1L2Q8IYS8 172 aa9.8□□□□□ -0.84
PDCD2-207ENST00000539212 Q8NBF4 154 aa9.8□□□□□ -0.84
PDCD2-207ENST00000539212 PRYO14603 147 aa9.79□□□□□ -0.84
PDCD2-207ENST00000539212 MEIG1Q5JSS6 88 aa9.79□□□□□ -0.84
PDCD2-207ENST00000539212 CTAG1AP78358 180 aa9.78□□□□□ -0.84
PDCD2-207ENST00000539212 MIR7-3HGQ8N6C7 128 aa9.78□□□□□ -0.84
PDCD2-207ENST00000539212 SPRR1AP35321 89 aa9.77□□□□□ -0.85
PDCD2-207ENST00000539212 SPAG11AQ6PDA7 123 aa9.77□□□□□ -0.85
PDCD2-207ENST00000539212 SMCR5Q8TEV8 140 aa9.77□□□□□ -0.85
PDCD2-207ENST00000539212 ZNF706Q9Y5V0 76 aaPredicted RBP9.77□□□□□ -0.85
PDCD2-207ENST00000539212 TRAV12-1A0A0B4J245 112 aa9.76□□□□□ -0.85
PDCD2-207ENST00000539212 IFI27L1Q96BM0 104 aa9.76□□□□□ -0.85
PDCD2-207ENST00000539212 TRBV10-3A0A0K0K1G6 114 aa9.75□□□□□ -0.85
PDCD2-207ENST00000539212 KRTAP4-16G5E9R7 235 aaPredicted RBP9.75□□□□□ -0.85
PDCD2-207ENST00000539212 ATP6V1G1O75348 118 aa9.75□□□□□ -0.85
PDCD2-207ENST00000539212 APOC3P02656 99 aa9.75□□□□□ -0.85
PDCD2-207ENST00000539212 KRTAP13-3Q3SY46 172 aa9.75□□□□□ -0.85
PDCD2-207ENST00000539212 LINC00337Q8N6G1 96 aa9.75□□□□□ -0.85
PDCD2-207ENST00000539212 ETDCA0A1B0GVM5 59 aa9.74□□□□□ -0.85
PDCD2-207ENST00000539212 FP248Q71RG6 208 aaPredicted RBP9.74□□□□□ -0.85
PDCD2-207ENST00000539212 KCNQ1DNQ9H478 68 aa9.74□□□□□ -0.85
PDCD2-207ENST00000539212 TSPEAR-AS2P59090 65 aa9.73□□□□□ -0.85
PDCD2-207ENST00000539212 H0Y8G0 127 aa9.72□□□□□ -0.85
PDCD2-207ENST00000539212 ERC2-IT1O76042 136 aa9.72□□□□□ -0.85
PDCD2-207ENST00000539212 ANKRD39Q53RE8 183 aa9.72□□□□□ -0.85
PDCD2-207ENST00000539212 FAM19A2Q8N3H0 131 aa9.72□□□□□ -0.85
PDCD2-207ENST00000539212 CHCHD1Q96BP2 118 aaKnown RBP9.72□□□□□ -0.85
PDCD2-207ENST00000539212 YPEL4Q96NS1 127 aa9.72□□□□□ -0.85
PDCD2-207ENST00000539212 GAGE2AQ6NT46 116 aa9.71□□□□□ -0.86
PDCD2-207ENST00000539212 KRTAP4-1Q9BYQ7 146 aa9.71□□□□□ -0.86
PDCD2-207ENST00000539212 NDUFA12Q9UI09 145 aa9.71□□□□□ -0.86
PDCD2-207ENST00000539212 IGLV9-49A0A0B4J1Y8 123 aa9.7□□□□□ -0.86
PDCD2-207ENST00000539212 HERV-K104P63124 156 aa9.7□□□□□ -0.86
PDCD2-207ENST00000539212 MOBPQ13875 183 aa9.7□□□□□ -0.86
PDCD2-207ENST00000539212 LINC00483Q53H64 154 aa9.7□□□□□ -0.86
PDCD2-207ENST00000539212 B5MCH6 92 aa9.69□□□□□ -0.86
PDCD2-207ENST00000539212 KRTAP9-6A0A140TA67 174 aa9.68□□□□□ -0.86
PDCD2-207ENST00000539212 SNAPINO95295 136 aa9.68□□□□□ -0.86
PDCD2-207ENST00000539212 MYMXA0A1B0GTQ4 84 aa9.67□□□□□ -0.86
PDCD2-207ENST00000539212 SVBPQ8N300 66 aa9.67□□□□□ -0.86
PDCD2-207ENST00000539212 Q9BRP9 147 aa9.67□□□□□ -0.86
PDCD2-207ENST00000539212 HSBP1O75506 76 aa9.66□□□□□ -0.86
PDCD2-207ENST00000539212 SPINK1P00995 79 aa9.66□□□□□ -0.86
PDCD2-207ENST00000539212 ASB16-AS1Q495Z4 193 aa9.66□□□□□ -0.86
PDCD2-207ENST00000539212 DDTP30046 118 aa9.65□□□□□ -0.86
PDCD2-207ENST00000539212 MAP1LC3CQ9BXW4 147 aa9.65□□□□□ -0.86
PDCD2-207ENST00000539212 NDUFA5Q16718 116 aa9.64□□□□□ -0.87
PDCD2-207ENST00000539212 Q8N377 158 aa9.64□□□□□ -0.87
PDCD2-207ENST00000539212 LINC00310P59036 64 aa9.63□□□□□ -0.87
PDCD2-207ENST00000539212 LINC00587B1AMM8 73 aa9.62□□□□□ -0.87
PDCD2-207ENST00000539212 LEPROTO15243 131 aa9.62□□□□□ -0.87
PDCD2-207ENST00000539212 Q6ZRX8 168 aa9.62□□□□□ -0.87
PDCD2-207ENST00000539212 PMCHL2Q9BQD1 86 aa9.62□□□□□ -0.87
PDCD2-207ENST00000539212 LOC107984156A0A0G2JMH3 177 aa9.61□□□□□ -0.87
PDCD2-207ENST00000539212 S100A12P80511 92 aa9.61□□□□□ -0.87
PDCD2-207ENST00000539212 ARL17AQ8IVW1 177 aa9.61□□□□□ -0.87
PDCD2-207ENST00000539212 TRBV10-2A0A0K0K1G8 114 aa9.6□□□□□ -0.87
PDCD2-207ENST00000539212 NPC2P61916 151 aa9.6□□□□□ -0.87
PDCD2-207ENST00000539212 SPANXB1Q9NS25 103 aaPredicted RBP9.6□□□□□ -0.87
PDCD2-207ENST00000539212 J3QQQ9 107 aa9.59□□□□□ -0.87
PDCD2-207ENST00000539212 SERF1AO75920 110 aa9.59□□□□□ -0.87
PDCD2-207ENST00000539212 LEPROTL1O95214 131 aa9.59□□□□□ -0.87
PDCD2-207ENST00000539212 C21orf62-AS1Q17RA5 79 aa9.59□□□□□ -0.87
PDCD2-207ENST00000539212 IGLV6-57P01721 117 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms