RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 DNAL4O96015 105 aa9.17□□□□□ -0.94
SMG6-203ENST00000536871 NANOS2P60321 138 aaKnown RBP9.17□□□□□ -0.94
SMG6-203ENST00000536871 ESRGQ1W209 222 aa9.16□□□□□ -0.94
SMG6-203ENST00000536871 WFDC10BQ8IUB3 73 aa9.16□□□□□ -0.94
SMG6-203ENST00000536871 ATOX1O00244 68 aa9.15□□□□□ -0.94
SMG6-203ENST00000536871 C2orf48Q96LS8 159 aa9.15□□□□□ -0.95
SMG6-203ENST00000536871 ZNF561-AS1K7EIQ3 104 aa9.14□□□□□ -0.95
SMG6-203ENST00000536871 HIST1H4AP62805 103 aaKnown RBP9.14□□□□□ -0.95
SMG6-203ENST00000536871 C1orf43Q9BWL3 253 aa9.14□□□□□ -0.95
SMG6-203ENST00000536871 DNAH10OSP0CZ25 163 aa9.13□□□□□ -0.95
SMG6-203ENST00000536871 TMEM258P61165 79 aa9.13□□□□□ -0.95
SMG6-203ENST00000536871 FAM19A5Q7Z5A7 132 aaPredicted RBP9.13□□□□□ -0.95
SMG6-203ENST00000536871 BAALC-AS2P0C853 105 aa9.13□□□□□ -0.95
SMG6-203ENST00000536871 UNQ6190/PRO20217Q6UXQ8 127 aa9.13□□□□□ -0.95
SMG6-203ENST00000536871 MAST4O15021 2626 aa9.12□□□□□ -0.95
SMG6-203ENST00000536871 INAFM2P0DMQ5 153 aa9.12□□□□□ -0.95
SMG6-203ENST00000536871 NBEAL2Q6ZNJ1 2754 aa9.11□□□□□ -0.95
SMG6-203ENST00000536871 GAGE2AQ6NT46 116 aa9.11□□□□□ -0.95
SMG6-203ENST00000536871 KRTAP26-1Q6PEX3 210 aa9.11□□□□□ -0.95
SMG6-203ENST00000536871 FAM218AQ96MZ4 157 aa9.11□□□□□ -0.95
SMG6-203ENST00000536871 K7EIL1 84 aa9.1□□□□□ -0.95
SMG6-203ENST00000536871 S100A7L2Q5SY68 101 aa9.09□□□□□ -0.95
SMG6-203ENST00000536871 C10orf25Q5T742 122 aa9.09□□□□□ -0.95
SMG6-203ENST00000536871 C6orf223Q8N319 242 aa9.09□□□□□ -0.95
SMG6-203ENST00000536871 CAMK2N2Q96S95 79 aa9.09□□□□□ -0.95
SMG6-203ENST00000536871 C9orf116Q5BN46 136 aaPredicted RBP9.08□□□□□ -0.96
SMG6-203ENST00000536871 RMI2Q96E14 147 aa9.08□□□□□ -0.96
SMG6-203ENST00000536871 C6orf48Q9UBA6 75 aa9.08□□□□□ -0.96
SMG6-203ENST00000536871 MRAPQ8TCY5 172 aa9.07□□□□□ -0.96
SMG6-203ENST00000536871 H3BQ85 93 aa9.06□□□□□ -0.96
SMG6-203ENST00000536871 TRRAPQ9Y4A5 3859 aa9.06□□□□□ -0.96
SMG6-203ENST00000536871 A0A087WYN8 130 aa9.06□□□□□ -0.96
SMG6-203ENST00000536871 LINC00167Q96N53 147 aa9.06□□□□□ -0.96
SMG6-203ENST00000536871 UPK3BQ9BT76 320 aa9.06□□□□□ -0.96
SMG6-203ENST00000536871 ORMDL1Q9P0S3 153 aa9.06□□□□□ -0.96
SMG6-203ENST00000536871 IGKV2D-24A0A075B6R9 120 aa9.05□□□□□ -0.96
SMG6-203ENST00000536871 LOC107984640A0A0U1RRK4 108 aa9.05□□□□□ -0.96
SMG6-203ENST00000536871 LECT2O14960 151 aa9.05□□□□□ -0.96
SMG6-203ENST00000536871 NDUFC2-KCTD14E9PQ53 114 aa9.04□□□□□ -0.96
SMG6-203ENST00000536871 IGLV6-57P01721 117 aa9.04□□□□□ -0.96
SMG6-203ENST00000536871 C15orf56Q8N910 161 aa9.04□□□□□ -0.96
SMG6-203ENST00000536871 SMCR5Q8TEV8 140 aa9.04□□□□□ -0.96
SMG6-203ENST00000536871 RPL18AQ02543 176 aaKnown RBP9.04□□□□□ -0.96
SMG6-203ENST00000536871 Q9HAA7 133 aa9.04□□□□□ -0.96
SMG6-203ENST00000536871 NCR3O14931 201 aa9.03□□□□□ -0.96
SMG6-203ENST00000536871 GHRHP01286 108 aa9.03□□□□□ -0.96
SMG6-203ENST00000536871 TMEM256-PLSCR3K7ERE1 68 aa9.02□□□□□ -0.96
SMG6-203ENST00000536871 HIGD2BQ4VC39 106 aa9.02□□□□□ -0.96
SMG6-203ENST00000536871 Q8N814 137 aa9.02□□□□□ -0.96
SMG6-203ENST00000536871 LINC00588Q9Y4M8 146 aa9.02□□□□□ -0.96
SMG6-203ENST00000536871 FBN1P35555 2871 aaKnown RBP9.02□□□□□ -0.97
SMG6-203ENST00000536871 PRR3P79522 188 aaKnown RBP9.02□□□□□ -0.97
SMG6-203ENST00000536871 SERP2Q8N6R1 65 aa9.02□□□□□ -0.97
SMG6-203ENST00000536871 DPH3Q96FX2 82 aa9.02□□□□□ -0.97
SMG6-203ENST00000536871 TRBV7-6A0A0J9YX20 115 aa9.01□□□□□ -0.97
SMG6-203ENST00000536871 JMJD7-PLA2G4BH0Y9G9 81 aa9.01□□□□□ -0.97
SMG6-203ENST00000536871 SYCNQ0VAF6 134 aa9.01□□□□□ -0.97
SMG6-203ENST00000536871 C6orf99Q4VX62 202 aa9.01□□□□□ -0.97
SMG6-203ENST00000536871 Q6JHZ5 121 aa9.01□□□□□ -0.97
SMG6-203ENST00000536871 Q6ZRU5 148 aa9.01□□□□□ -0.97
SMG6-203ENST00000536871 OBSCN-AS1Q96MR7 158 aa9.01□□□□□ -0.97
SMG6-203ENST00000536871 PRB2P02812 416 aaPredicted RBP9□□□□□ -0.97
SMG6-203ENST00000536871 M0R378 163 aa9□□□□□ -0.97
SMG6-203ENST00000536871 C22orf24Q9Y442 160 aa9□□□□□ -0.97
SMG6-203ENST00000536871 LINC00575Q6W349 94 aa8.99□□□□□ -0.97
SMG6-203ENST00000536871 TLX1NBP0CAT3 122 aa8.98□□□□□ -0.97
SMG6-203ENST00000536871 DIRC1Q969H9 104 aa8.98□□□□□ -0.97
SMG6-203ENST00000536871 STAB1Q9NY15 2570 aa8.98□□□□□ -0.97
SMG6-203ENST00000536871 TRAV23DV6A0A075B6W5 121 aa8.98□□□□□ -0.97
SMG6-203ENST00000536871 Q8NDZ9 215 aa8.98□□□□□ -0.97
SMG6-203ENST00000536871 hADV29S1A0JD25 119 aa8.97□□□□□ -0.97
SMG6-203ENST00000536871 VPREB1P12018 145 aa8.97□□□□□ -0.97
SMG6-203ENST00000536871 XAGE1AQ9HD64 81 aa8.97□□□□□ -0.97
SMG6-203ENST00000536871 B9D2Q9BPU9 175 aa8.96□□□□□ -0.97
SMG6-203ENST00000536871 TRBV10-3A0A0K0K1G6 114 aa8.95□□□□□ -0.98
SMG6-203ENST00000536871 PLA2G2DQ9UNK4 145 aa8.95□□□□□ -0.98
SMG6-203ENST00000536871 ZNF73O43830 326 aaPredicted RBP8.94□□□□□ -0.98
SMG6-203ENST00000536871 ATP5EP2Q5VTU8 51 aa8.94□□□□□ -0.98
SMG6-203ENST00000536871 DNAH3Q8TD57 4116 aa8.93□□□□□ -0.98
SMG6-203ENST00000536871 USP17L23D6RBM5 183 aa8.92□□□□□ -0.98
SMG6-203ENST00000536871 COX7BP24311 80 aa8.92□□□□□ -0.98
SMG6-203ENST00000536871 Q5XG85 94 aa8.92□□□□□ -0.98
SMG6-203ENST00000536871 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.92□□□□□ -0.98
SMG6-203ENST00000536871 SLPIP03973 132 aa8.91□□□□□ -0.98
SMG6-203ENST00000536871 ELOF1P60002 83 aaKnown RBP8.91□□□□□ -0.98
SMG6-203ENST00000536871 Q6ZRP5 223 aa8.91□□□□□ -0.98
SMG6-203ENST00000536871 BCE1O60756 84 aa8.91□□□□□ -0.98
SMG6-203ENST00000536871 NKAPP1Q8N9T2 125 aa8.91□□□□□ -0.98
SMG6-203ENST00000536871 C14orf132Q9NPU4 83 aa8.9□□□□□ -0.98
SMG6-203ENST00000536871 EPM2AB3EWF7 344 aa8.89□□□□□ -0.99
SMG6-203ENST00000536871 PDE6GP18545 87 aa8.89□□□□□ -0.99
SMG6-203ENST00000536871 MDFIQ99750 246 aa8.89□□□□□ -0.99
SMG6-203ENST00000536871 IGLV5-37A0A075B6J1 123 aa8.89□□□□□ -0.99
SMG6-203ENST00000536871 CCKP06307 115 aa8.89□□□□□ -0.99
SMG6-203ENST00000536871 COL6A5A8TX70 2615 aa8.88□□□□□ -0.99
SMG6-203ENST00000536871 CMYA5Q8N3K9 4069 aa8.88□□□□□ -0.99
SMG6-203ENST00000536871 UBE2DNLQ8IWF7 75 aa8.87□□□□□ -0.99
SMG6-203ENST00000536871 NUPR2A6NF83 97 aa8.87□□□□□ -0.99
SMG6-203ENST00000536871 C14orf177Q52M58 125 aa8.87□□□□□ -0.99
SMG6-203ENST00000536871 C9orf129Q5T035 196 aaKnown RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms