RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 C16orf90A8MZG2 172 aa15.78■□□□□ 0.12
LDLRAD3-203ENST00000528989 GCSHP23434 173 aa15.78■□□□□ 0.12
LDLRAD3-203ENST00000528989 Q8NDZ9 215 aa15.78■□□□□ 0.12
LDLRAD3-203ENST00000528989 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP15.76■□□□□ 0.11
LDLRAD3-203ENST00000528989 FAM168BA1KXE4 195 aa15.76■□□□□ 0.11
LDLRAD3-203ENST00000528989 KRTAP10-1P60331 282 aa15.76■□□□□ 0.11
LDLRAD3-203ENST00000528989 Q6ZVH6 145 aa15.76■□□□□ 0.11
LDLRAD3-203ENST00000528989 PRR3P79522 188 aaKnown RBP15.74■□□□□ 0.11
LDLRAD3-203ENST00000528989 CEND1Q8N111 149 aa15.73■□□□□ 0.11
LDLRAD3-203ENST00000528989 LOC107984156A0A0G2JMH3 177 aa15.72■□□□□ 0.11
LDLRAD3-203ENST00000528989 IFITM1P13164 125 aa15.72■□□□□ 0.11
LDLRAD3-203ENST00000528989 HSD52Q0P140 79 aa15.72■□□□□ 0.11
LDLRAD3-203ENST00000528989 ARL17AQ8IVW1 177 aa15.72■□□□□ 0.11
LDLRAD3-203ENST00000528989 KRTAP7-1Q8IUC3 87 aa15.71■□□□□ 0.11
LDLRAD3-203ENST00000528989 FAM30AQ9NZY2 134 aa15.71■□□□□ 0.11
LDLRAD3-203ENST00000528989 TAL2Q16559 108 aa15.71■□□□□ 0.11
LDLRAD3-203ENST00000528989 SERTAD4-AS1Q5TG53 156 aa15.71■□□□□ 0.11
LDLRAD3-203ENST00000528989 FXYD2P54710 66 aa15.7■□□□□ 0.1
LDLRAD3-203ENST00000528989 A0A1W2PNN7 141 aa15.69■□□□□ 0.1
LDLRAD3-203ENST00000528989 DPH3Q96FX2 82 aa15.69■□□□□ 0.1
LDLRAD3-203ENST00000528989 LRP1BQ9NZR2 4599 aa15.69■□□□□ 0.1
LDLRAD3-203ENST00000528989 A4D1N5 150 aa15.69■□□□□ 0.1
LDLRAD3-203ENST00000528989 HINT1P49773 126 aaPredicted RBP15.69■□□□□ 0.1
LDLRAD3-203ENST00000528989 SPACA4Q8TDM5 124 aa15.68■□□□□ 0.1
LDLRAD3-203ENST00000528989 PKIGQ9Y2B9 76 aa15.67■□□□□ 0.1
LDLRAD3-203ENST00000528989 FAM19A5Q7Z5A7 132 aaPredicted RBP15.67■□□□□ 0.1
LDLRAD3-203ENST00000528989 DYNC1H1Q14204 4646 aaKnown RBP15.67■□□□□ 0.1
LDLRAD3-203ENST00000528989 RPL24P83731 157 aaKnown RBP15.66■□□□□ 0.1
LDLRAD3-203ENST00000528989 VPREB1P12018 145 aa15.65■□□□□ 0.1
LDLRAD3-203ENST00000528989 LINC00474Q9P2X8 69 aa15.65■□□□□ 0.1
LDLRAD3-203ENST00000528989 BVES-AS1Q5T3Y7 98 aa15.65■□□□□ 0.1
LDLRAD3-203ENST00000528989 COPS9Q8WXC6 57 aa15.64■□□□□ 0.09
LDLRAD3-203ENST00000528989 DNAH8Q96JB1 4490 aa15.64■□□□□ 0.09
LDLRAD3-203ENST00000528989 IGKV2-28A0A075B6P5 120 aa15.63■□□□□ 0.09
LDLRAD3-203ENST00000528989 IGKV2D-28P01615 120 aa15.63■□□□□ 0.09
LDLRAD3-203ENST00000528989 A0A087WYN8 130 aa15.63■□□□□ 0.09
LDLRAD3-203ENST00000528989 NCR3O14931 201 aa15.63■□□□□ 0.09
LDLRAD3-203ENST00000528989 HAMPP81172 84 aa15.62■□□□□ 0.09
LDLRAD3-203ENST00000528989 PPDPFQ9H3Y8 114 aa15.62■□□□□ 0.09
LDLRAD3-203ENST00000528989 NDUFC2O95298 119 aa15.61■□□□□ 0.09
LDLRAD3-203ENST00000528989 Q6ZSA8 131 aa15.61■□□□□ 0.09
LDLRAD3-203ENST00000528989 PLA2G2DQ9UNK4 145 aa15.61■□□□□ 0.09
LDLRAD3-203ENST00000528989 CFC1BP0CG36 223 aa15.59■□□□□ 0.09
LDLRAD3-203ENST00000528989 CFC1P0CG37 223 aa15.59■□□□□ 0.09
LDLRAD3-203ENST00000528989 BATFQ16520 125 aa15.59■□□□□ 0.09
LDLRAD3-203ENST00000528989 C22orf24Q9Y442 160 aa15.59■□□□□ 0.09
LDLRAD3-203ENST00000528989 EPPK1P58107 5090 aaKnown RBP15.59■□□□□ 0.09
LDLRAD3-203ENST00000528989 LINC00337Q8N6G1 96 aa15.58■□□□□ 0.08
LDLRAD3-203ENST00000528989 GAGE10A6NGK3 116 aa15.57■□□□□ 0.08
LDLRAD3-203ENST00000528989 NHP2Q9NX24 153 aaKnown RBP15.57■□□□□ 0.08
LDLRAD3-203ENST00000528989 K7ERJ3 54 aa15.56■□□□□ 0.08
LDLRAD3-203ENST00000528989 M0R143 59 aa15.56■□□□□ 0.08
LDLRAD3-203ENST00000528989 NKAPP1Q8N9T2 125 aa15.56■□□□□ 0.08
LDLRAD3-203ENST00000528989 CIRBP-AS1Q8TBR5 109 aa15.56■□□□□ 0.08
LDLRAD3-203ENST00000528989 TMEM238LA0A1B0GVL6 79 aa15.54■□□□□ 0.08
LDLRAD3-203ENST00000528989 A6NJY4 79 aa15.54■□□□□ 0.08
LDLRAD3-203ENST00000528989 M0QXV9 152 aa15.54■□□□□ 0.08
LDLRAD3-203ENST00000528989 PHF5AQ7RTV0 110 aaKnown RBP15.54■□□□□ 0.08
LDLRAD3-203ENST00000528989 IGLV5-37A0A075B6J1 123 aa15.54■□□□□ 0.08
LDLRAD3-203ENST00000528989 SCXQ7RTU7 201 aa15.54■□□□□ 0.08
LDLRAD3-203ENST00000528989 PLAC8Q9NZF1 115 aa15.54■□□□□ 0.08
LDLRAD3-203ENST00000528989 C7orf33Q8WU49 177 aa15.53■□□□□ 0.08
LDLRAD3-203ENST00000528989 SNHG12Q9BXW3 62 aa15.53■□□□□ 0.08
LDLRAD3-203ENST00000528989 MRPL55Q7Z7F7 128 aaKnown RBP15.52■□□□□ 0.08
LDLRAD3-203ENST00000528989 A6NDN8 102 aa15.52■□□□□ 0.07
LDLRAD3-203ENST00000528989 RPL37AP8A6NKH3 93 aa15.52■□□□□ 0.07
LDLRAD3-203ENST00000528989 EPM2AB3EWF7 344 aa15.52■□□□□ 0.07
LDLRAD3-203ENST00000528989 M0R378 163 aa15.52■□□□□ 0.07
LDLRAD3-203ENST00000528989 OR13C6PQ8NH95 151 aa15.52■□□□□ 0.07
LDLRAD3-203ENST00000528989 LINC00167Q96N53 147 aa15.52■□□□□ 0.07
LDLRAD3-203ENST00000528989 TRBV10-2A0A0K0K1G8 114 aa15.5■□□□□ 0.07
LDLRAD3-203ENST00000528989 TRBV10-3A0A0K0K1G6 114 aa15.49■□□□□ 0.07
LDLRAD3-203ENST00000528989 RAB37Q96AX2 223 aa15.49■□□□□ 0.07
LDLRAD3-203ENST00000528989 A0A0B4J2C4 111 aa15.48■□□□□ 0.07
LDLRAD3-203ENST00000528989 A0A1B0GWB2 263 aa15.48■□□□□ 0.07
LDLRAD3-203ENST00000528989 S100A7L2Q5SY68 101 aa15.48■□□□□ 0.07
LDLRAD3-203ENST00000528989 KRTAP11-1Q8IUC1 163 aa15.48■□□□□ 0.07
LDLRAD3-203ENST00000528989 APOBP04114 4563 aaKnown RBP15.47■□□□□ 0.07
LDLRAD3-203ENST00000528989 TRAV13-2A0A0B4J235 113 aa15.46■□□□□ 0.07
LDLRAD3-203ENST00000528989 XGP55808 180 aa15.46■□□□□ 0.07
LDLRAD3-203ENST00000528989 H7C2G1 150 aa15.46■□□□□ 0.06
LDLRAD3-203ENST00000528989 IGLV6-57P01721 117 aa15.46■□□□□ 0.06
LDLRAD3-203ENST00000528989 RPL13AP40429 203 aaKnown RBP15.45■□□□□ 0.06
LDLRAD3-203ENST00000528989 PRO1854Q9UHT4 67 aa15.45■□□□□ 0.06
LDLRAD3-203ENST00000528989 IGLV1-50A0A075B6I6 118 aa15.44■□□□□ 0.06
LDLRAD3-203ENST00000528989 TMEM126AQ9H061 195 aa15.44■□□□□ 0.06
LDLRAD3-203ENST00000528989 LBHQ53QV2 105 aaPredicted RBP15.42■□□□□ 0.06
LDLRAD3-203ENST00000528989 UBE2BP63146 152 aa15.41■□□□□ 0.06
LDLRAD3-203ENST00000528989 SMIM11BQ8TCY0 68 aa15.38■□□□□ 0.05
LDLRAD3-203ENST00000528989 KCNQ1DNQ9H478 68 aa15.36■□□□□ 0.05
LDLRAD3-203ENST00000528989 TRAV23DV6A0A075B6W5 121 aa15.35■□□□□ 0.05
LDLRAD3-203ENST00000528989 TSPAN13O95857 204 aa15.35■□□□□ 0.05
LDLRAD3-203ENST00000528989 Q1RN00 199 aa15.35■□□□□ 0.05
LDLRAD3-203ENST00000528989 NAA38Q9BRA0 125 aaKnown RBP15.35■□□□□ 0.05
LDLRAD3-203ENST00000528989 SMR3BP02814 79 aaPredicted RBP15.33■□□□□ 0.05
LDLRAD3-203ENST00000528989 TAX1BP3O14907 124 aa15.32■□□□□ 0.04
LDLRAD3-203ENST00000528989 ZNF73O43830 326 aaPredicted RBP15.31■□□□□ 0.04
LDLRAD3-203ENST00000528989 C6orf99Q4VX62 202 aa15.31■□□□□ 0.04
LDLRAD3-203ENST00000528989 COL5A1-AS1Q5SY13 56 aa15.31■□□□□ 0.04
LDLRAD3-203ENST00000528989 PSORS1C2Q9UIG4 136 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms