RNA–Protein interactions for RNA: ENST00000527203.5

FGFR1-231, Transcript of fibroblast growth factor receptor 1, human

TSL 3

Gene FGFR1, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR1-231	ENST00000527203	ERG28	Q9UKR5	140 aa		6.68	□□□□□ -1.34
FGFR1-231	ENST00000527203	LINC01549	A6NIU2	74 aa		6.67	□□□□□ -1.34
FGFR1-231	ENST00000527203	C18orf32	Q8TCD1	76 aa		6.67	□□□□□ -1.34
FGFR1-231	ENST00000527203	TMEM126A	Q9H061	195 aa		6.67	□□□□□ -1.34
FGFR1-231	ENST00000527203		A0A0U1RRA0	63 aa		6.66	□□□□□ -1.34
FGFR1-231	ENST00000527203	C11orf86	A6NJI1	115 aa		6.66	□□□□□ -1.34
FGFR1-231	ENST00000527203	HBD	P02042	147 aa		6.65	□□□□□ -1.34
FGFR1-231	ENST00000527203	COX19	Q49B96	90 aa		6.65	□□□□□ -1.34
FGFR1-231	ENST00000527203	TMEM170B	Q5T4T1	132 aa		6.65	□□□□□ -1.34
FGFR1-231	ENST00000527203	LINC00304	Q8N9R0	145 aa		6.65	□□□□□ -1.34
FGFR1-231	ENST00000527203	TRAPPC1	Q9Y5R8	145 aa		6.65	□□□□□ -1.34
FGFR1-231	ENST00000527203		M0R378	163 aa		6.64	□□□□□ -1.35
FGFR1-231	ENST00000527203	LINC00614	P0C842	121 aa		6.64	□□□□□ -1.35
FGFR1-231	ENST00000527203	RHEB	Q15382	184 aa		6.64	□□□□□ -1.35
FGFR1-231	ENST00000527203	BAGE3	Q86Y29	109 aa		6.64	□□□□□ -1.35
FGFR1-231	ENST00000527203	C3orf22	Q8N5N4	141 aa		6.64	□□□□□ -1.35
FGFR1-231	ENST00000527203	IGKV2D-26	A0A0A0MRZ7	120 aa		6.63	□□□□□ -1.35
FGFR1-231	ENST00000527203	C10orf91	Q5T1B1	145 aa		6.63	□□□□□ -1.35
FGFR1-231	ENST00000527203	HIGD2A	Q9BW72	106 aa		6.63	□□□□□ -1.35
FGFR1-231	ENST00000527203	FAM229B	Q4G0N7	80 aa		6.62	□□□□□ -1.35
FGFR1-231	ENST00000527203	MUC17	Q685J3	4493 aa		6.61	□□□□□ -1.35
FGFR1-231	ENST00000527203	LINC00158	P58513	81 aa		6.61	□□□□□ -1.35
FGFR1-231	ENST00000527203	RPL24	P83731	157 aa	Known RBP	6.61	□□□□□ -1.35
FGFR1-231	ENST00000527203	CBLN2	Q8IUK8	224 aa		6.61	□□□□□ -1.35
FGFR1-231	ENST00000527203	CHTOP	Q9Y3Y2	248 aa	Known RBP	6.61	□□□□□ -1.35
FGFR1-231	ENST00000527203	NCR3	O14931	201 aa		6.6	□□□□□ -1.35
FGFR1-231	ENST00000527203	COX17	Q14061	63 aa		6.6	□□□□□ -1.35
FGFR1-231	ENST00000527203	PLEKHB2	Q96CS7	222 aa		6.6	□□□□□ -1.35
FGFR1-231	ENST00000527203	APOC3	P02656	99 aa		6.59	□□□□□ -1.35
FGFR1-231	ENST00000527203	FAT4	Q6V0I7	4981 aa		6.59	□□□□□ -1.36
FGFR1-231	ENST00000527203	IGLV7-46	A0A075B6I9	117 aa		6.58	□□□□□ -1.36
FGFR1-231	ENST00000527203		A0A0U1RQV1	116 aa		6.58	□□□□□ -1.36
FGFR1-231	ENST00000527203	TMEM223	A0PJW6	202 aa		6.58	□□□□□ -1.36
FGFR1-231	ENST00000527203	SMIM13	P0DJ93	91 aa		6.58	□□□□□ -1.36
FGFR1-231	ENST00000527203	CDIP1	Q9H305	208 aa		6.58	□□□□□ -1.36
FGFR1-231	ENST00000527203	SPRR4	Q96PI1	79 aa		6.57	□□□□□ -1.36
FGFR1-231	ENST00000527203		H0Y8G0	127 aa		6.56	□□□□□ -1.36
FGFR1-231	ENST00000527203	MEIG1	Q5JSS6	88 aa		6.56	□□□□□ -1.36
FGFR1-231	ENST00000527203	BOD1L2	Q8IYS8	172 aa		6.56	□□□□□ -1.36
FGFR1-231	ENST00000527203	DAND5	Q8N907	189 aa		6.56	□□□□□ -1.36
FGFR1-231	ENST00000527203	PPDPF	Q9H3Y8	114 aa		6.56	□□□□□ -1.36
FGFR1-231	ENST00000527203	TPRXL	Q17RH7	258 aa		6.55	□□□□□ -1.36
FGFR1-231	ENST00000527203	FAM19A2	Q8N3H0	131 aa		6.55	□□□□□ -1.36
FGFR1-231	ENST00000527203	MIR7-3HG	Q8N6C7	128 aa		6.55	□□□□□ -1.36
FGFR1-231	ENST00000527203	IFI27L1	Q96BM0	104 aa		6.55	□□□□□ -1.36
FGFR1-231	ENST00000527203	SFTA2	Q6UW10	78 aa		6.54	□□□□□ -1.36
FGFR1-231	ENST00000527203	TRAV12-1	A0A0B4J245	112 aa		6.53	□□□□□ -1.36
FGFR1-231	ENST00000527203	PRY	O14603	147 aa		6.53	□□□□□ -1.36
FGFR1-231	ENST00000527203	ATP6V1G1	O75348	118 aa		6.53	□□□□□ -1.36
FGFR1-231	ENST00000527203	SNAPIN	O95295	136 aa		6.53	□□□□□ -1.36
FGFR1-231	ENST00000527203	TSPEAR-AS2	P59090	65 aa		6.53	□□□□□ -1.36
FGFR1-231	ENST00000527203		Q8NBF4	154 aa		6.53	□□□□□ -1.36
FGFR1-231	ENST00000527203	YPEL4	Q96NS1	127 aa		6.53	□□□□□ -1.36
FGFR1-231	ENST00000527203	KRTAP9-2	Q9BYQ4	174 aa		6.53	□□□□□ -1.36
FGFR1-231	ENST00000527203	TRBV10-3	A0A0K0K1G6	114 aa		6.52	□□□□□ -1.37
FGFR1-231	ENST00000527203	SVBP	Q8N300	66 aa		6.52	□□□□□ -1.37
FGFR1-231	ENST00000527203	SMCR5	Q8TEV8	140 aa		6.52	□□□□□ -1.37
FGFR1-231	ENST00000527203	CHCHD1	Q96BP2	118 aa	Known RBP	6.52	□□□□□ -1.37
FGFR1-231	ENST00000527203	ETDC	A0A1B0GVM5	59 aa		6.51	□□□□□ -1.37
FGFR1-231	ENST00000527203	NDUFA12	Q9UI09	145 aa		6.51	□□□□□ -1.37
FGFR1-231	ENST00000527203	ZNF706	Q9Y5V0	76 aa	Predicted RBP	6.51	□□□□□ -1.37
FGFR1-231	ENST00000527203	HSBP1	O75506	76 aa		6.5	□□□□□ -1.37
FGFR1-231	ENST00000527203	NDUFA5	Q16718	116 aa		6.5	□□□□□ -1.37
FGFR1-231	ENST00000527203	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	6.49	□□□□□ -1.37
FGFR1-231	ENST00000527203	ERC2-IT1	O76042	136 aa		6.49	□□□□□ -1.37
FGFR1-231	ENST00000527203	SPRR1A	P35321	89 aa		6.49	□□□□□ -1.37
FGFR1-231	ENST00000527203	GAGE2A	Q6NT46	116 aa		6.49	□□□□□ -1.37
FGFR1-231	ENST00000527203	LINC00337	Q8N6G1	96 aa		6.49	□□□□□ -1.37
FGFR1-231	ENST00000527203	KCNQ1DN	Q9H478	68 aa		6.49	□□□□□ -1.37
FGFR1-231	ENST00000527203	IGLV9-49	A0A0B4J1Y8	123 aa		6.48	□□□□□ -1.37
FGFR1-231	ENST00000527203	LINC00310	P59036	64 aa		6.48	□□□□□ -1.37
FGFR1-231	ENST00000527203	HERV-K104	P63124	156 aa		6.48	□□□□□ -1.37
FGFR1-231	ENST00000527203	PMCHL2	Q9BQD1	86 aa		6.48	□□□□□ -1.37
FGFR1-231	ENST00000527203	MYMX	A0A1B0GTQ4	84 aa		6.47	□□□□□ -1.37
FGFR1-231	ENST00000527203	NPC2	P61916	151 aa		6.47	□□□□□ -1.37
FGFR1-231	ENST00000527203	MOBP	Q13875	183 aa		6.47	□□□□□ -1.37
FGFR1-231	ENST00000527203	SPAG11A	Q6PDA7	123 aa		6.47	□□□□□ -1.37
FGFR1-231	ENST00000527203		B5MCH6	92 aa		6.46	□□□□□ -1.38
FGFR1-231	ENST00000527203	SERF1A	O75920	110 aa		6.46	□□□□□ -1.38
FGFR1-231	ENST00000527203	TRGC2	P03986	189 aa		6.46	□□□□□ -1.38
FGFR1-231	ENST00000527203	DDT	P30046	118 aa		6.46	□□□□□ -1.38
FGFR1-231	ENST00000527203	KRTAP13-3	Q3SY46	172 aa		6.46	□□□□□ -1.38
FGFR1-231	ENST00000527203	KRTAP4-8	Q9BYQ9	185 aa		6.46	□□□□□ -1.38
FGFR1-231	ENST00000527203	LEPROT	O15243	131 aa		6.45	□□□□□ -1.38
FGFR1-231	ENST00000527203	LEPROTL1	O95214	131 aa		6.45	□□□□□ -1.38
FGFR1-231	ENST00000527203	FABP4	P15090	132 aa		6.45	□□□□□ -1.38
FGFR1-231	ENST00000527203	LINC00483	Q53H64	154 aa		6.45	□□□□□ -1.38
FGFR1-231	ENST00000527203		Q9BRP9	147 aa		6.45	□□□□□ -1.38
FGFR1-231	ENST00000527203	MAP1LC3C	Q9BXW4	147 aa		6.45	□□□□□ -1.38
FGFR1-231	ENST00000527203	CTAG1A	P78358	180 aa		6.44	□□□□□ -1.38
FGFR1-231	ENST00000527203	FP248	Q71RG6	208 aa	Predicted RBP	6.44	□□□□□ -1.38
FGFR1-231	ENST00000527203	TMA7	Q9Y2S6	64 aa	Known RBP	6.44	□□□□□ -1.38
FGFR1-231	ENST00000527203		J3QQQ9	107 aa		6.43	□□□□□ -1.38
FGFR1-231	ENST00000527203	KRTAP4-1	Q9BYQ7	146 aa		6.43	□□□□□ -1.38
FGFR1-231	ENST00000527203	LINC00587	B1AMM8	73 aa		6.42	□□□□□ -1.38
FGFR1-231	ENST00000527203	LGALS3	P17931	250 aa	Known RBP	6.42	□□□□□ -1.38
FGFR1-231	ENST00000527203	S100A12	P80511	92 aa		6.42	□□□□□ -1.38
FGFR1-231	ENST00000527203	SOSTDC1	Q6X4U4	206 aa		6.42	□□□□□ -1.38
FGFR1-231	ENST00000527203		Q6ZRX8	168 aa		6.42	□□□□□ -1.38
FGFR1-231	ENST00000527203	DPM2	O94777	84 aa		6.41	□□□□□ -1.38

Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms