RNA–Protein interactions for RNA: ENST00000523430.5

SQLE-206, Transcript of squalene epoxidase, humanhuman

TSL 2 BASIC

Gene SQLE, Length 1,879 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-206ENST00000523430 F8WDY8 70 aa13.63□□□□□ -0.23
SQLE-206ENST00000523430 NCR3O14931 201 aa13.63□□□□□ -0.23
SQLE-206ENST00000523430 OR13C6PQ8NH95 151 aa13.63□□□□□ -0.23
SQLE-206ENST00000523430 SLPIP03973 132 aa13.62□□□□□ -0.23
SQLE-206ENST00000523430 WFDC2Q14508 124 aa13.62□□□□□ -0.23
SQLE-206ENST00000523430 ATXN8Q156A1 80 aa13.62□□□□□ -0.23
SQLE-206ENST00000523430 VPS13DQ5THJ4 4388 aa13.62□□□□□ -0.23
SQLE-206ENST00000523430 F8W1H4 67 aa13.61□□□□□ -0.23
SQLE-206ENST00000523430 SMIM11BQ8TCY0 68 aa13.61□□□□□ -0.23
SQLE-206ENST00000523430 NDUFC2-KCTD14E9PQ53 114 aa13.61□□□□□ -0.23
SQLE-206ENST00000523430 CARD19Q96LW7 228 aa13.61□□□□□ -0.23
SQLE-206ENST00000523430 RPL28P46779 137 aaKnown RBP13.6□□□□□ -0.23
SQLE-206ENST00000523430 TENM2Q9NT68 2774 aa13.59□□□□□ -0.23
SQLE-206ENST00000523430 SMCPP49901 116 aaPredicted RBP13.59□□□□□ -0.23
SQLE-206ENST00000523430 NBDYA0A0U1RRE5 68 aa13.59□□□□□ -0.23
SQLE-206ENST00000523430 Q6ZRP5 223 aa13.59□□□□□ -0.23
SQLE-206ENST00000523430 LST1O00453 97 aa13.57□□□□□ -0.24
SQLE-206ENST00000523430 GAGE2EQ4V326 116 aa13.57□□□□□ -0.24
SQLE-206ENST00000523430 GAGE2DQ9UEU5 116 aa13.57□□□□□ -0.24
SQLE-206ENST00000523430 C9JAW5 83 aa13.56□□□□□ -0.24
SQLE-206ENST00000523430 PSCAO43653 123 aa13.56□□□□□ -0.24
SQLE-206ENST00000523430 LINC01620Q4KN68 170 aa13.56□□□□□ -0.24
SQLE-206ENST00000523430 TTC32Q5I0X7 151 aa13.56□□□□□ -0.24
SQLE-206ENST00000523430 RPL18AQ02543 176 aaKnown RBP13.54□□□□□ -0.24
SQLE-206ENST00000523430 FAM218AQ96MZ4 157 aa13.54□□□□□ -0.24
SQLE-206ENST00000523430 RNF151Q2KHN1 245 aa13.53□□□□□ -0.24
SQLE-206ENST00000523430 C9orf129Q5T035 196 aaKnown RBP13.52□□□□□ -0.25
SQLE-206ENST00000523430 TMEM126AQ9H061 195 aa13.52□□□□□ -0.25
SQLE-206ENST00000523430 SLC25A20O43772 301 aa13.51□□□□□ -0.25
SQLE-206ENST00000523430 VPREB1P12018 145 aa13.51□□□□□ -0.25
SQLE-206ENST00000523430 ETDBQ3ZM63 59 aa13.51□□□□□ -0.25
SQLE-206ENST00000523430 S100A7L2Q5SY68 101 aa13.51□□□□□ -0.25
SQLE-206ENST00000523430 M0R2N4 97 aa13.5□□□□□ -0.25
SQLE-206ENST00000523430 TLX1NBP0CAT3 122 aa13.5□□□□□ -0.25
SQLE-206ENST00000523430 OCIAD2Q56VL3 154 aa13.5□□□□□ -0.25
SQLE-206ENST00000523430 TRBV10-2A0A0K0K1G8 114 aa13.49□□□□□ -0.25
SQLE-206ENST00000523430 IGLV6-57P01721 117 aa13.48□□□□□ -0.25
SQLE-206ENST00000523430 Q6ZRN7 208 aaPredicted RBP13.48□□□□□ -0.25
SQLE-206ENST00000523430 A0A087WYN8 130 aa13.46□□□□□ -0.25
SQLE-206ENST00000523430 TRBV10-3A0A0K0K1G6 114 aa13.46□□□□□ -0.26
SQLE-206ENST00000523430 ANKRD29Q8N6D5 301 aa13.44□□□□□ -0.26
SQLE-206ENST00000523430 TRACP01848 142 aa13.44□□□□□ -0.26
SQLE-206ENST00000523430 SERTAD4-AS1Q5TG53 156 aa13.44□□□□□ -0.26
SQLE-206ENST00000523430 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.43□□□□□ -0.26
SQLE-206ENST00000523430 LRCOL1A6NCL2 159 aa13.43□□□□□ -0.26
SQLE-206ENST00000523430 H0YGX0 51 aa13.43□□□□□ -0.26
SQLE-206ENST00000523430 CNBPP62633 177 aaKnown RBP13.43□□□□□ -0.26
SQLE-206ENST00000523430 C6orf99Q4VX62 202 aa13.43□□□□□ -0.26
SQLE-206ENST00000523430 M0QXV9 152 aa13.42□□□□□ -0.26
SQLE-206ENST00000523430 GAGE2BQ13066 116 aa13.42□□□□□ -0.26
SQLE-206ENST00000523430 WWC2-AS2Q96NR7 200 aa13.42□□□□□ -0.26
SQLE-206ENST00000523430 TEN1Q86WV5 123 aa13.42□□□□□ -0.26
SQLE-206ENST00000523430 M0R378 163 aa13.41□□□□□ -0.26
SQLE-206ENST00000523430 KMT2AQ03164 3969 aa13.4□□□□□ -0.26
SQLE-206ENST00000523430 LOC107984640A0A0U1RRK4 108 aa13.4□□□□□ -0.26
SQLE-206ENST00000523430 FAM168BA1KXE4 195 aa13.4□□□□□ -0.26
SQLE-206ENST00000523430 C14orf177Q52M58 125 aa13.4□□□□□ -0.26
SQLE-206ENST00000523430 TRAV23DV6A0A075B6W5 121 aa13.4□□□□□ -0.26
SQLE-206ENST00000523430 H3BT86 120 aa13.4□□□□□ -0.26
SQLE-206ENST00000523430 LINC01600Q96MT4 127 aa13.4□□□□□ -0.26
SQLE-206ENST00000523430 TGP01266 2768 aa13.39□□□□□ -0.27
SQLE-206ENST00000523430 DNAH2Q9P225 4427 aa13.39□□□□□ -0.27
SQLE-206ENST00000523430 K7ERU9 68 aa13.38□□□□□ -0.27
SQLE-206ENST00000523430 Q6ZR54 194 aa13.38□□□□□ -0.27
SQLE-206ENST00000523430 KRTAP7-1Q8IUC3 87 aa13.36□□□□□ -0.27
SQLE-206ENST00000523430 NKAPP1Q8N9T2 125 aa13.36□□□□□ -0.27
SQLE-206ENST00000523430 PLA2G2DQ9UNK4 145 aa13.36□□□□□ -0.27
SQLE-206ENST00000523430 LY6G6CO95867 125 aa13.36□□□□□ -0.27
SQLE-206ENST00000523430 DNAL4O96015 105 aa13.35□□□□□ -0.27
SQLE-206ENST00000523430 A0A096LNI7 61 aa13.34□□□□□ -0.27
SQLE-206ENST00000523430 C7orf33Q8WU49 177 aa13.34□□□□□ -0.27
SQLE-206ENST00000523430 ZNF73O43830 326 aaPredicted RBP13.33□□□□□ -0.27
SQLE-206ENST00000523430 DIRC1Q969H9 104 aa13.33□□□□□ -0.27
SQLE-206ENST00000523430 FAM19A5Q7Z5A7 132 aaPredicted RBP13.33□□□□□ -0.28
SQLE-206ENST00000523430 PPDPFLQ8WWR9 84 aa13.33□□□□□ -0.28
SQLE-206ENST00000523430 LINC00476Q8WZB0 136 aa13.32□□□□□ -0.28
SQLE-206ENST00000523430 IGLV5-37A0A075B6J1 123 aa13.31□□□□□ -0.28
SQLE-206ENST00000523430 IGKV2-24A0A0C4DH68 120 aa13.31□□□□□ -0.28
SQLE-206ENST00000523430 Q8N814 137 aa13.31□□□□□ -0.28
SQLE-206ENST00000523430 TEX49A0A1B0GTD5 131 aa13.31□□□□□ -0.28
SQLE-206ENST00000523430 BAALC-AS2P0C853 105 aa13.31□□□□□ -0.28
SQLE-206ENST00000523430 ALMS1Q8TCU4 4167 aa13.31□□□□□ -0.28
SQLE-206ENST00000523430 C16orf90A8MZG2 172 aa13.3□□□□□ -0.28
SQLE-206ENST00000523430 C22orf24Q9Y442 160 aa13.3□□□□□ -0.28
SQLE-206ENST00000523430 LINC00575Q6W349 94 aa13.29□□□□□ -0.28
SQLE-206ENST00000523430 A0A087WTM6 91 aa13.29□□□□□ -0.28
SQLE-206ENST00000523430 DNAH6Q9C0G6 4158 aa13.28□□□□□ -0.28
SQLE-206ENST00000523430 A0A1B0GX51 115 aa13.28□□□□□ -0.28
SQLE-206ENST00000523430 LINC00167Q96N53 147 aa13.28□□□□□ -0.28
SQLE-206ENST00000523430 C9orf163Q8N9P6 203 aa13.27□□□□□ -0.29
SQLE-206ENST00000523430 RPL37AP8A6NKH3 93 aa13.26□□□□□ -0.29
SQLE-206ENST00000523430 CHTF8P0CG12 524 aa13.26□□□□□ -0.29
SQLE-206ENST00000523430 ELOF1P60002 83 aaKnown RBP13.26□□□□□ -0.29
SQLE-206ENST00000523430 J3QR89 54 aa13.25□□□□□ -0.29
SQLE-206ENST00000523430 COX7BP24311 80 aa13.25□□□□□ -0.29
SQLE-206ENST00000523430 KCNQ1DNQ9H478 68 aa13.25□□□□□ -0.29
SQLE-206ENST00000523430 MRPL55Q7Z7F7 128 aaKnown RBP13.25□□□□□ -0.29
SQLE-206ENST00000523430 C1orf134Q5TEV5 83 aa13.24□□□□□ -0.29
SQLE-206ENST00000523430 ORMDL1Q9P0S3 153 aa13.24□□□□□ -0.29
SQLE-206ENST00000523430 hADV29S1A0JD25 119 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms