RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 NUP188Q5SRE5 1749 aa1.24□□□□□ -2.21
SQLE-204ENST00000520493 HCG22E2RYF7 251 aa1.24□□□□□ -2.21
SQLE-204ENST00000520493 K7EIL1 84 aa1.24□□□□□ -2.21
SQLE-204ENST00000520493 SSSCA1O60232 199 aa1.24□□□□□ -2.21
SQLE-204ENST00000520493 SMIM6P0DI80 62 aa1.24□□□□□ -2.21
SQLE-204ENST00000520493 RBP2P50120 134 aa1.24□□□□□ -2.21
SQLE-204ENST00000520493 GNG11P61952 73 aa1.24□□□□□ -2.21
SQLE-204ENST00000520493 GTF2H5Q6ZYL4 71 aa1.24□□□□□ -2.21
SQLE-204ENST00000520493 SVBPQ8N300 66 aa1.24□□□□□ -2.21
SQLE-204ENST00000520493 DSCR8Q96T75 97 aa1.24□□□□□ -2.21
SQLE-204ENST00000520493 COL14A1Q05707 1796 aaKnown RBP1.24□□□□□ -2.21
SQLE-204ENST00000520493 TJP1Q07157 1748 aa1.23□□□□□ -2.21
SQLE-204ENST00000520493 PAPPAQ13219 1627 aa1.23□□□□□ -2.21
SQLE-204ENST00000520493 PVALEFA0A1B0GWK0 134 aa1.23□□□□□ -2.21
SQLE-204ENST00000520493 CLPSL1A2RUU4 121 aa1.23□□□□□ -2.21
SQLE-204ENST00000520493 IFITM1P13164 125 aa1.23□□□□□ -2.21
SQLE-204ENST00000520493 ATP5EP56381 51 aaPredicted RBP1.23□□□□□ -2.21
SQLE-204ENST00000520493 KRTAP5-10Q6L8G5 202 aa1.23□□□□□ -2.21
SQLE-204ENST00000520493 PLAC4Q8WY50 150 aa1.23□□□□□ -2.21
SQLE-204ENST00000520493 ARFGEF1Q9Y6D6 1849 aa1.22□□□□□ -2.21
SQLE-204ENST00000520493 ANKRD36CQ5JPF3 1778 aa1.22□□□□□ -2.21
SQLE-204ENST00000520493 A0A087WTM6 91 aa1.22□□□□□ -2.21
SQLE-204ENST00000520493 A0A096LNT2 108 aa1.22□□□□□ -2.21
SQLE-204ENST00000520493 FAM24AA6NFZ4 105 aa1.22□□□□□ -2.21
SQLE-204ENST00000520493 KRTAP2-3P0C7H8 128 aa1.22□□□□□ -2.21
SQLE-204ENST00000520493 HSD52Q0P140 79 aa1.22□□□□□ -2.21
SQLE-204ENST00000520493 COMMD6Q7Z4G1 85 aa1.22□□□□□ -2.21
SQLE-204ENST00000520493 AQP10Q96PS8 301 aa1.22□□□□□ -2.21
SQLE-204ENST00000520493 KRTAP2-4Q9BYR9 128 aa1.22□□□□□ -2.21
SQLE-204ENST00000520493 CYP4F30PQ9H0H9 118 aa1.22□□□□□ -2.21
SQLE-204ENST00000520493 LINC00312Q9Y6C7 94 aa1.22□□□□□ -2.21
SQLE-204ENST00000520493 V9GYV3 84 aa1.22□□□□□ -2.21
SQLE-204ENST00000520493 C4AP0C0L4 1744 aa1.22□□□□□ -2.21
SQLE-204ENST00000520493 C4BP0C0L5 1744 aa1.22□□□□□ -2.21
SQLE-204ENST00000520493 TIAM2Q8IVF5 1701 aa1.22□□□□□ -2.21
SQLE-204ENST00000520493 ARAP2Q8WZ64 1704 aa1.22□□□□□ -2.21
SQLE-204ENST00000520493 TNS1Q9HBL0 1735 aaKnown RBP1.22□□□□□ -2.21
SQLE-204ENST00000520493 ZNF831Q5JPB2 1677 aa1.22□□□□□ -2.21
SQLE-204ENST00000520493 DOPEY2Q9Y3R5 2298 aa1.22□□□□□ -2.21
SQLE-204ENST00000520493 DOCK2Q92608 1830 aa1.22□□□□□ -2.21
SQLE-204ENST00000520493 BCORQ6W2J9 1755 aa1.21□□□□□ -2.22
SQLE-204ENST00000520493 DDX60Q8IY21 1712 aaKnown RBP1.21□□□□□ -2.22
SQLE-204ENST00000520493 ABCA3Q99758 1704 aa1.21□□□□□ -2.22
SQLE-204ENST00000520493 TOGARAM1Q9Y4F4 1720 aa1.21□□□□□ -2.22
SQLE-204ENST00000520493 DOCK1Q14185 1865 aa1.21□□□□□ -2.22
SQLE-204ENST00000520493 PLCH1Q4KWH8 1693 aa1.21□□□□□ -2.22
SQLE-204ENST00000520493 UBE2L5PA0A1B0GUS4 154 aa1.21□□□□□ -2.22
SQLE-204ENST00000520493 FXYD6P3P58550 94 aa1.21□□□□□ -2.22
SQLE-204ENST00000520493 UBE2L3P68036 154 aaKnown RBP1.21□□□□□ -2.22
SQLE-204ENST00000520493 DUOX1Q9NRD9 1551 aa1.21□□□□□ -2.22
SQLE-204ENST00000520493 PLIN4Q96Q06 1357 aa1.21□□□□□ -2.22
SQLE-204ENST00000520493 DOT1LQ8TEK3 1739 aa1.2□□□□□ -2.22
SQLE-204ENST00000520493 EDDM3BP56851 147 aa1.2□□□□□ -2.22
SQLE-204ENST00000520493 SNRPFP62306 86 aaKnown RBP1.2□□□□□ -2.22
SQLE-204ENST00000520493 SMIM5Q71RC9 77 aa1.2□□□□□ -2.22
SQLE-204ENST00000520493 DPH3P1Q9H4G8 78 aa1.2□□□□□ -2.22
SQLE-204ENST00000520493 SRRM2Q9UQ35 2752 aaKnown RBP1.2□□□□□ -2.22
SQLE-204ENST00000520493 KIAA1551Q9HCM1 1747 aa1.2□□□□□ -2.22
SQLE-204ENST00000520493 WNK3Q9BYP7 1800 aa1.19□□□□□ -2.22
SQLE-204ENST00000520493 A0A1B0GUL6 1792 aa1.19□□□□□ -2.22
SQLE-204ENST00000520493 TRAV30A0A087WSZ9 112 aa1.19□□□□□ -2.22
SQLE-204ENST00000520493 TMEM218A2RU14 115 aa1.19□□□□□ -2.22
SQLE-204ENST00000520493 H3BQF6 201 aa1.19□□□□□ -2.22
SQLE-204ENST00000520493 RPL37P61927 97 aaKnown RBP1.19□□□□□ -2.22
SQLE-204ENST00000520493 DCDP81605 110 aaKnown RBP1.19□□□□□ -2.22
SQLE-204ENST00000520493 ZNF720Q7Z2F6 126 aa1.19□□□□□ -2.22
SQLE-204ENST00000520493 NRAPQ86VF7 1730 aa1.19□□□□□ -2.22
SQLE-204ENST00000520493 ACBD7Q8N6N7 88 aa1.19□□□□□ -2.22
SQLE-204ENST00000520493 SCN7AQ01118 1682 aa1.19□□□□□ -2.22
SQLE-204ENST00000520493 NHSQ6T4R5 1651 aa1.19□□□□□ -2.22
SQLE-204ENST00000520493 KMT2AQ03164 3969 aa1.19□□□□□ -2.22
SQLE-204ENST00000520493 MED13LQ71F56 2210 aa1.19□□□□□ -2.22
SQLE-204ENST00000520493 ASXL3Q9C0F0 2248 aa1.19□□□□□ -2.22
SQLE-204ENST00000520493 LY75O60449 1722 aa1.18□□□□□ -2.22
SQLE-204ENST00000520493 BTAF1O14981 1849 aa1.18□□□□□ -2.22
SQLE-204ENST00000520493 H3BQ15 152 aa1.18□□□□□ -2.22
SQLE-204ENST00000520493 SPINK8P0C7L1 97 aa1.18□□□□□ -2.22
SQLE-204ENST00000520493 GNGT1P63211 74 aa1.18□□□□□ -2.22
SQLE-204ENST00000520493 TNRC6CQ9HCJ0 1690 aaKnown RBP1.18□□□□□ -2.22
SQLE-204ENST00000520493 LOC285556D6RIA3 1793 aa1.18□□□□□ -2.22
SQLE-204ENST00000520493 AKAP9Q99996 3911 aa1.18□□□□□ -2.22
SQLE-204ENST00000520493 DDX60LQ5H9U9 1706 aaKnown RBP1.18□□□□□ -2.22
SQLE-204ENST00000520493 TMEM262E9PQX1 116 aa1.17□□□□□ -2.22
SQLE-204ENST00000520493 LY6G6CO95867 125 aa1.17□□□□□ -2.22
SQLE-204ENST00000520493 C10orf128Q5T292 105 aa1.17□□□□□ -2.22
SQLE-204ENST00000520493 TTC9CQ8N5M4 171 aa1.17□□□□□ -2.22
SQLE-204ENST00000520493 TACC2O95359 2948 aa1.17□□□□□ -2.22
SQLE-204ENST00000520493 LRRC37AA6NMS7 1700 aa1.17□□□□□ -2.22
SQLE-204ENST00000520493 QSER1Q2KHR3 1735 aa1.17□□□□□ -2.22
SQLE-204ENST00000520493 SBF2Q86WG5 1849 aa1.17□□□□□ -2.22
SQLE-204ENST00000520493 MYH4Q9Y623 1939 aa1.17□□□□□ -2.22
SQLE-204ENST00000520493 UBR3Q6ZT12 1888 aa1.16□□□□□ -2.22
SQLE-204ENST00000520493 ABCA1O95477 2261 aa1.16□□□□□ -2.22
SQLE-204ENST00000520493 S100A8P05109 93 aa1.16□□□□□ -2.22
SQLE-204ENST00000520493 SPINK9Q5DT21 86 aa1.16□□□□□ -2.22
SQLE-204ENST00000520493 MYOZ3Q8TDC0 251 aa1.16□□□□□ -2.22
SQLE-204ENST00000520493 Q96NJ1 140 aa1.16□□□□□ -2.22
SQLE-204ENST00000520493 WFDC6Q9BQY6 131 aa1.16□□□□□ -2.22
SQLE-204ENST00000520493 SCP2D1Q9UJQ7 156 aa1.16□□□□□ -2.22
SQLE-204ENST00000520493 LENEPQ9Y5L5 61 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms