RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 FAM19A1Q7Z5A9 133 aa14.85□□□□□ -0.03
VEGFA-220ENST00000519767 TMEM223A0PJW6 202 aa14.83□□□□□ -0.04
VEGFA-220ENST00000519767 TMEM238C9JI98 176 aa14.83□□□□□ -0.04
VEGFA-220ENST00000519767 KRTAP13-2Q52LG2 175 aa14.83□□□□□ -0.04
VEGFA-220ENST00000519767 IFI27L1Q96BM0 104 aa14.83□□□□□ -0.04
VEGFA-220ENST00000519767 M0R378 163 aa14.82□□□□□ -0.04
VEGFA-220ENST00000519767 PRLHP81277 87 aa14.82□□□□□ -0.04
VEGFA-220ENST00000519767 IGKV2D-26A0A0A0MRZ7 120 aa14.81□□□□□ -0.04
VEGFA-220ENST00000519767 YPEL4Q96NS1 127 aa14.81□□□□□ -0.04
VEGFA-220ENST00000519767 ATP6V1G1O75348 118 aa14.79□□□□□ -0.04
VEGFA-220ENST00000519767 CTAG1AP78358 180 aa14.79□□□□□ -0.04
VEGFA-220ENST00000519767 Q8NDZ9 215 aa14.79□□□□□ -0.04
VEGFA-220ENST00000519767 CBLN2Q8IUK8 224 aa14.78□□□□□ -0.04
VEGFA-220ENST00000519767 LINC00304Q8N9R0 145 aa14.78□□□□□ -0.04
VEGFA-220ENST00000519767 PLEKHB2Q96CS7 222 aa14.78□□□□□ -0.04
VEGFA-220ENST00000519767 LINC00587B1AMM8 73 aa14.76□□□□□ -0.05
VEGFA-220ENST00000519767 HERV-K104P63124 156 aa14.75□□□□□ -0.05
VEGFA-220ENST00000519767 A0A0U1RRA0 63 aa14.74□□□□□ -0.05
VEGFA-220ENST00000519767 HSBP1O75506 76 aa14.73□□□□□ -0.05
VEGFA-220ENST00000519767 SMIM13P0DJ93 91 aa14.72□□□□□ -0.05
VEGFA-220ENST00000519767 HIGD2AQ9BW72 106 aa14.72□□□□□ -0.05
VEGFA-220ENST00000519767 MEIG1Q5JSS6 88 aa14.71□□□□□ -0.05
VEGFA-220ENST00000519767 BOD1L2Q8IYS8 172 aa14.7□□□□□ -0.06
VEGFA-220ENST00000519767 FAM19A2Q8N3H0 131 aa14.69□□□□□ -0.06
VEGFA-220ENST00000519767 MYMXA0A1B0GTQ4 84 aa14.68□□□□□ -0.06
VEGFA-220ENST00000519767 MAP1LC3CQ9BXW4 147 aa14.68□□□□□ -0.06
VEGFA-220ENST00000519767 NDUFA12Q9UI09 145 aa14.68□□□□□ -0.06
VEGFA-220ENST00000519767 PRYO14603 147 aa14.67□□□□□ -0.06
VEGFA-220ENST00000519767 MIR7-3HGQ8N6C7 128 aa14.67□□□□□ -0.06
VEGFA-220ENST00000519767 MUC2Q02817 5179 aa14.67□□□□□ -0.06
VEGFA-220ENST00000519767 ZNF706Q9Y5V0 76 aaPredicted RBP14.66□□□□□ -0.06
VEGFA-220ENST00000519767 KCNQ1DNQ9H478 68 aa14.65□□□□□ -0.06
VEGFA-220ENST00000519767 SPAG11AQ6PDA7 123 aa14.64□□□□□ -0.07
VEGFA-220ENST00000519767 LINC00337Q8N6G1 96 aa14.64□□□□□ -0.07
VEGFA-220ENST00000519767 SPRR4Q96PI1 79 aa14.64□□□□□ -0.07
VEGFA-220ENST00000519767 LEPROTL1O95214 131 aa14.63□□□□□ -0.07
VEGFA-220ENST00000519767 TRGC2P03986 189 aa14.63□□□□□ -0.07
VEGFA-220ENST00000519767 RETNLBQ9BQ08 111 aa14.63□□□□□ -0.07
VEGFA-220ENST00000519767 A0A0U1RQV1 116 aa14.62□□□□□ -0.07
VEGFA-220ENST00000519767 C3orf22Q8N5N4 141 aa14.62□□□□□ -0.07
VEGFA-220ENST00000519767 H0Y8G0 127 aa14.61□□□□□ -0.07
VEGFA-220ENST00000519767 PLNP26678 52 aa14.61□□□□□ -0.07
VEGFA-220ENST00000519767 SPRR1AP35321 89 aa14.61□□□□□ -0.07
VEGFA-220ENST00000519767 S100A12P80511 92 aa14.61□□□□□ -0.07
VEGFA-220ENST00000519767 NCR3O14931 201 aa14.6□□□□□ -0.07
VEGFA-220ENST00000519767 LEPROTO15243 131 aa14.6□□□□□ -0.07
VEGFA-220ENST00000519767 IGLV7-46A0A075B6I9 117 aa14.59□□□□□ -0.07
VEGFA-220ENST00000519767 LOC107984156A0A0G2JMH3 177 aa14.58□□□□□ -0.08
VEGFA-220ENST00000519767 ETDCA0A1B0GVM5 59 aa14.58□□□□□ -0.08
VEGFA-220ENST00000519767 SERF1AO75920 110 aa14.58□□□□□ -0.08
VEGFA-220ENST00000519767 TPRXLQ17RH7 258 aa14.58□□□□□ -0.08
VEGFA-220ENST00000519767 ARL17AQ8IVW1 177 aa14.58□□□□□ -0.08
VEGFA-220ENST00000519767 HSPB8Q9UJY1 196 aa14.58□□□□□ -0.08
VEGFA-220ENST00000519767 C4orf48Q5BLP8 95 aa14.57□□□□□ -0.08
VEGFA-220ENST00000519767 SMCR5Q8TEV8 140 aa14.57□□□□□ -0.08
VEGFA-220ENST00000519767 TRBV10-3A0A0K0K1G6 114 aa14.56□□□□□ -0.08
VEGFA-220ENST00000519767 KRTAP4-16G5E9R7 235 aaPredicted RBP14.56□□□□□ -0.08
VEGFA-220ENST00000519767 CDIP1Q9H305 208 aa14.55□□□□□ -0.08
VEGFA-220ENST00000519767 J3QQQ9 107 aa14.54□□□□□ -0.08
VEGFA-220ENST00000519767 DPM2O94777 84 aa14.54□□□□□ -0.08
VEGFA-220ENST00000519767 HERVK_113P61574 105 aa14.54□□□□□ -0.08
VEGFA-220ENST00000519767 TRBV10-2A0A0K0K1G8 114 aa14.53□□□□□ -0.08
VEGFA-220ENST00000519767 NMUP48645 174 aa14.53□□□□□ -0.08
VEGFA-220ENST00000519767 LINC00310P59036 64 aa14.53□□□□□ -0.08
VEGFA-220ENST00000519767 TSPEAR-AS2P59090 65 aa14.53□□□□□ -0.08
VEGFA-220ENST00000519767 FABP4P15090 132 aa14.51□□□□□ -0.09
VEGFA-220ENST00000519767 IGKCP01834 107 aa14.49□□□□□ -0.09
VEGFA-220ENST00000519767 LGALS3P17931 250 aaKnown RBP14.49□□□□□ -0.09
VEGFA-220ENST00000519767 DDTP30046 118 aa14.49□□□□□ -0.09
VEGFA-220ENST00000519767 DAND5Q8N907 189 aa14.49□□□□□ -0.09
VEGFA-220ENST00000519767 MIEN1Q9BRT3 115 aa14.49□□□□□ -0.09
VEGFA-220ENST00000519767 PPDPFQ9H3Y8 114 aa14.49□□□□□ -0.09
VEGFA-220ENST00000519767 B5MCH6 92 aa14.48□□□□□ -0.09
VEGFA-220ENST00000519767 LINC00483Q53H64 154 aa14.48□□□□□ -0.09
VEGFA-220ENST00000519767 FP248Q71RG6 208 aaPredicted RBP14.47□□□□□ -0.09
VEGFA-220ENST00000519767 Q8NBF4 154 aa14.47□□□□□ -0.09
VEGFA-220ENST00000519767 NDUFC2O95298 119 aa14.46□□□□□ -0.09
VEGFA-220ENST00000519767 SPANXB1Q9NS25 103 aaPredicted RBP14.46□□□□□ -0.09
VEGFA-220ENST00000519767 COLCA2A8K830 154 aa14.45□□□□□ -0.1
VEGFA-220ENST00000519767 SPINK1P00995 79 aa14.45□□□□□ -0.1
VEGFA-220ENST00000519767 GAGE2AQ6NT46 116 aa14.44□□□□□ -0.1
VEGFA-220ENST00000519767 PMCHL2Q9BQD1 86 aa14.44□□□□□ -0.1
VEGFA-220ENST00000519767 S100A7L2Q5SY68 101 aa14.43□□□□□ -0.1
VEGFA-220ENST00000519767 IGLV6-57P01721 117 aa14.41□□□□□ -0.1
VEGFA-220ENST00000519767 Q6ZRX8 168 aa14.4□□□□□ -0.1
VEGFA-220ENST00000519767 SSBP3-AS1Q7Z2R9 100 aa14.4□□□□□ -0.1
VEGFA-220ENST00000519767 SLC7A5P1Q8MH63 180 aa14.4□□□□□ -0.1
VEGFA-220ENST00000519767 ERC2-IT1O76042 136 aa14.39□□□□□ -0.11
VEGFA-220ENST00000519767 JOSD1Q15040 202 aaPredicted RBP14.39□□□□□ -0.11
VEGFA-220ENST00000519767 Q9BRP9 147 aa14.38□□□□□ -0.11
VEGFA-220ENST00000519767 E9PLD3 99 aa14.37□□□□□ -0.11
VEGFA-220ENST00000519767 A0A0J9YXY3 114 aa14.36□□□□□ -0.11
VEGFA-220ENST00000519767 CBY1Q9Y3M2 126 aa14.36□□□□□ -0.11
VEGFA-220ENST00000519767 ADAMTSL4-AS1Q5T5F5 129 aa14.35□□□□□ -0.11
VEGFA-220ENST00000519767 TRAV23DV6A0A075B6W5 121 aa14.34□□□□□ -0.11
VEGFA-220ENST00000519767 IGLV9-49A0A0B4J1Y8 123 aa14.34□□□□□ -0.11
VEGFA-220ENST00000519767 RPS29P62273 56 aaKnown RBP14.33□□□□□ -0.12
VEGFA-220ENST00000519767 MOBPQ13875 183 aa14.33□□□□□ -0.12
VEGFA-220ENST00000519767 ZNF73O43830 326 aaPredicted RBP14.32□□□□□ -0.12
VEGFA-220ENST00000519767 SOSTDC1Q6X4U4 206 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms