RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 SPAG11AQ6PDA7 123 aa9.28□□□□□ -0.92
TCOF1-214ENST00000515035 GOLGB1Q14789 3259 aaKnown RBP9.28□□□□□ -0.92
TCOF1-214ENST00000515035 NUPR2A6NF83 97 aa9.28□□□□□ -0.92
TCOF1-214ENST00000515035 LINC01556Q5JQF7 62 aa9.28□□□□□ -0.92
TCOF1-214ENST00000515035 LYPD5Q6UWN5 251 aa9.27□□□□□ -0.93
TCOF1-214ENST00000515035 SMCR5Q8TEV8 140 aa9.26□□□□□ -0.93
TCOF1-214ENST00000515035 TM2D3Q9BRN9 247 aa9.26□□□□□ -0.93
TCOF1-214ENST00000515035 IGLV5-45A0A087WSX0 123 aa9.25□□□□□ -0.93
TCOF1-214ENST00000515035 Q6ZQT0 140 aa9.25□□□□□ -0.93
TCOF1-214ENST00000515035 C11orf72Q8NBR9 251 aa9.25□□□□□ -0.93
TCOF1-214ENST00000515035 TET2Q6N021 2002 aaPredicted RBP9.25□□□□□ -0.93
TCOF1-214ENST00000515035 C22orf24Q9Y442 160 aa9.25□□□□□ -0.93
TCOF1-214ENST00000515035 LRRK2Q5S007 2527 aa9.24□□□□□ -0.93
TCOF1-214ENST00000515035 IGKV2D-30A0A075B6S6 120 aa9.23□□□□□ -0.93
TCOF1-214ENST00000515035 IGKV2-30P06310 120 aa9.23□□□□□ -0.93
TCOF1-214ENST00000515035 CENPFP49454 3210 aa9.23□□□□□ -0.93
TCOF1-214ENST00000515035 TP53AIP1Q9HCN2 124 aa9.23□□□□□ -0.93
TCOF1-214ENST00000515035 FASNP49327 2511 aaKnown RBP9.23□□□□□ -0.93
TCOF1-214ENST00000515035 ADAMTS20P59510 1910 aa9.22□□□□□ -0.93
TCOF1-214ENST00000515035 LOC110117498A0A087WWA1 95 aa9.21□□□□□ -0.93
TCOF1-214ENST00000515035 RAI1Q7Z5J4 1906 aaPredicted RBP9.21□□□□□ -0.93
TCOF1-214ENST00000515035 A0A1B0GW54 56 aa9.21□□□□□ -0.93
TCOF1-214ENST00000515035 ACYP2P14621 99 aa9.21□□□□□ -0.93
TCOF1-214ENST00000515035 FAM19A4Q96LR4 140 aa9.21□□□□□ -0.94
TCOF1-214ENST00000515035 ATP11AUNQ6ZP68 121 aa9.2□□□□□ -0.94
TCOF1-214ENST00000515035 H3BPC8 53 aa9.19□□□□□ -0.94
TCOF1-214ENST00000515035 FSHBP01225 129 aa9.18□□□□□ -0.94
TCOF1-214ENST00000515035 Q8NBF4 154 aa9.18□□□□□ -0.94
TCOF1-214ENST00000515035 ELOF1P60002 83 aaKnown RBP9.18□□□□□ -0.94
TCOF1-214ENST00000515035 C7orf65Q6ZTY9 151 aa9.18□□□□□ -0.94
TCOF1-214ENST00000515035 IGLV5-52A0A0A0MRZ9 124 aa9.18□□□□□ -0.94
TCOF1-214ENST00000515035 C8orf87E5RJ46 101 aa9.18□□□□□ -0.94
TCOF1-214ENST00000515035 C6orf48Q9UBA6 75 aa9.18□□□□□ -0.94
TCOF1-214ENST00000515035 MTORP42345 2549 aa9.17□□□□□ -0.94
TCOF1-214ENST00000515035 LINC00167Q96N53 147 aa9.17□□□□□ -0.94
TCOF1-214ENST00000515035 TRAV22A0A0B4J277 110 aa9.16□□□□□ -0.94
TCOF1-214ENST00000515035 NHLRC4P0CG21 123 aaPredicted RBP9.16□□□□□ -0.94
TCOF1-214ENST00000515035 COL4A2P08572 1712 aa9.14□□□□□ -0.95
TCOF1-214ENST00000515035 VPREB1P12018 145 aa9.14□□□□□ -0.95
TCOF1-214ENST00000515035 A8MUN3 132 aa9.13□□□□□ -0.95
TCOF1-214ENST00000515035 LITAFQ99732 161 aa9.13□□□□□ -0.95
TCOF1-214ENST00000515035 FHL3Q13643 280 aa9.13□□□□□ -0.95
TCOF1-214ENST00000515035 LINC00476Q8WZB0 136 aa9.13□□□□□ -0.95
TCOF1-214ENST00000515035 Q6ZRX8 168 aa9.1□□□□□ -0.95
TCOF1-214ENST00000515035 MOBPQ13875 183 aa9.09□□□□□ -0.95
TCOF1-214ENST00000515035 PTPRBP23467 1997 aa9.09□□□□□ -0.95
TCOF1-214ENST00000515035 IGLV8-61A0A075B6I0 122 aa9.09□□□□□ -0.95
TCOF1-214ENST00000515035 ERC2-IT1O76042 136 aa9.09□□□□□ -0.95
TCOF1-214ENST00000515035 TRBV7-4A0A0J9YYF1 115 aa9.08□□□□□ -0.96
TCOF1-214ENST00000515035 LINC00336Q6ZUF6 198 aa9.08□□□□□ -0.96
TCOF1-214ENST00000515035 CYP4F30PQ9H0H9 118 aa9.07□□□□□ -0.96
TCOF1-214ENST00000515035 RPL37AP61513 92 aaKnown RBP9.07□□□□□ -0.96
TCOF1-214ENST00000515035 ST20-AS1Q8NBB2 130 aa9.06□□□□□ -0.96
TCOF1-214ENST00000515035 EPG5Q9HCE0 2579 aa9.06□□□□□ -0.96
TCOF1-214ENST00000515035 ACANP16112 2415 aa9.05□□□□□ -0.96
TCOF1-214ENST00000515035 C1orf134Q5TEV5 83 aa9.05□□□□□ -0.96
TCOF1-214ENST00000515035 SPINT4Q6UDR6 99 aa9.05□□□□□ -0.96
TCOF1-214ENST00000515035 SPACA4Q8TDM5 124 aa9.05□□□□□ -0.96
TCOF1-214ENST00000515035 KLKP1Q107X0 134 aa9.04□□□□□ -0.96
TCOF1-214ENST00000515035 COA5Q86WW8 74 aa9.03□□□□□ -0.96
TCOF1-214ENST00000515035 K7EQZ3 153 aa9.02□□□□□ -0.96
TCOF1-214ENST00000515035 KRTAP24-1Q3LI83 254 aa9.02□□□□□ -0.97
TCOF1-214ENST00000515035 UTRNP46939 3433 aa9.02□□□□□ -0.97
TCOF1-214ENST00000515035 LINC01600Q96MT4 127 aa9.01□□□□□ -0.97
TCOF1-214ENST00000515035 CD164Q04900 197 aa9□□□□□ -0.97
TCOF1-214ENST00000515035 LOC101927531A0A1B0GV80 90 aa9□□□□□ -0.97
TCOF1-214ENST00000515035 IGLV6-57P01721 117 aa8.99□□□□□ -0.97
TCOF1-214ENST00000515035 EIF4EBP3O60516 100 aaPredicted RBP8.99□□□□□ -0.97
TCOF1-214ENST00000515035 EPM2AB3EWF7 344 aa8.98□□□□□ -0.97
TCOF1-214ENST00000515035 H7BZZ5 65 aa8.98□□□□□ -0.97
TCOF1-214ENST00000515035 PHF5AQ7RTV0 110 aaKnown RBP8.98□□□□□ -0.97
TCOF1-214ENST00000515035 LINC00313P59037 77 aa8.98□□□□□ -0.97
TCOF1-214ENST00000515035 POLQO75417 2590 aa8.97□□□□□ -0.97
TCOF1-214ENST00000515035 A8MWP4 228 aa8.97□□□□□ -0.97
TCOF1-214ENST00000515035 UQCR11O14957 56 aa8.97□□□□□ -0.97
TCOF1-214ENST00000515035 SSBP3-AS1Q7Z2R9 100 aa8.96□□□□□ -0.97
TCOF1-214ENST00000515035 GVQW2A0A096LPI5 108 aaPredicted RBP8.96□□□□□ -0.98
TCOF1-214ENST00000515035 ANKRD17O75179 2603 aaKnown RBP8.95□□□□□ -0.98
TCOF1-214ENST00000515035 H3BNG1 76 aa8.94□□□□□ -0.98
TCOF1-214ENST00000515035 KLK9Q2XQG4 91 aa8.94□□□□□ -0.98
TCOF1-214ENST00000515035 Q6ZRP5 223 aa8.94□□□□□ -0.98
TCOF1-214ENST00000515035 MRPL34Q9BQ48 92 aaKnown RBP8.92□□□□□ -0.98
TCOF1-214ENST00000515035 FAM229AH3BQW9 127 aa8.92□□□□□ -0.98
TCOF1-214ENST00000515035 KTN1-AS1Q86SY8 53 aa8.91□□□□□ -0.98
TCOF1-214ENST00000515035 MDFIQ99750 246 aa8.91□□□□□ -0.98
TCOF1-214ENST00000515035 C16orf90A8MZG2 172 aa8.91□□□□□ -0.98
TCOF1-214ENST00000515035 LINC00528Q8N1L1 170 aa8.9□□□□□ -0.98
TCOF1-214ENST00000515035 PLA2G1BP04054 148 aaKnown RBP8.89□□□□□ -0.99
TCOF1-214ENST00000515035 MIR22HGQ0VDD5 57 aa8.88□□□□□ -0.99
TCOF1-214ENST00000515035 CHTF8P0CG12 524 aa8.88□□□□□ -0.99
TCOF1-214ENST00000515035 LCA10Q71F78 164 aa8.87□□□□□ -0.99
TCOF1-214ENST00000515035 FLNBO75369 2602 aaKnown RBP8.87□□□□□ -0.99
TCOF1-214ENST00000515035 PRR15Q8IV56 129 aa8.86□□□□□ -0.99
TCOF1-214ENST00000515035 KCNQ1DNQ9H478 68 aa8.86□□□□□ -0.99
TCOF1-214ENST00000515035 FAM168BA1KXE4 195 aa8.86□□□□□ -0.99
TCOF1-214ENST00000515035 DNAH12Q6ZR08 3092 aa8.85□□□□□ -0.99
TCOF1-214ENST00000515035 PRRC2CQ9Y520 2896 aaKnown RBP8.85□□□□□ -0.99
TCOF1-214ENST00000515035 IGFL1Q6UW32 110 aa8.85□□□□□ -0.99
TCOF1-214ENST00000515035 Q8NAQ8 132 aa8.84□□□□□ -0.99
TCOF1-214ENST00000515035 IGLV1-50A0A075B6I6 118 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms