RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 M0R378 163 aa6.15□□□□□ -1.42
HMGXB3-205ENST00000514469 PRLHP81277 87 aa6.15□□□□□ -1.42
HMGXB3-205ENST00000514469 FAM229BQ4G0N7 80 aa6.15□□□□□ -1.42
HMGXB3-205ENST00000514469 KRTAP13-2Q52LG2 175 aa6.15□□□□□ -1.42
HMGXB3-205ENST00000514469 TYMSOSQ8TAI1 123 aa6.15□□□□□ -1.42
HMGXB3-205ENST00000514469 PRR4Q16378 134 aa6.14□□□□□ -1.43
HMGXB3-205ENST00000514469 FAM19A1Q7Z5A9 133 aa6.14□□□□□ -1.43
HMGXB3-205ENST00000514469 ANAPC11Q9NYG5 84 aa6.14□□□□□ -1.43
HMGXB3-205ENST00000514469 HSBP1O75506 76 aa6.13□□□□□ -1.43
HMGXB3-205ENST00000514469 LINC00158P58513 81 aa6.13□□□□□ -1.43
HMGXB3-205ENST00000514469 FAM19A2Q8N3H0 131 aa6.13□□□□□ -1.43
HMGXB3-205ENST00000514469 TRGC2P03986 189 aa6.12□□□□□ -1.43
HMGXB3-205ENST00000514469 LINC00310P59036 64 aa6.12□□□□□ -1.43
HMGXB3-205ENST00000514469 A0A0U1RRA0 63 aa6.11□□□□□ -1.43
HMGXB3-205ENST00000514469 TSPAN13O95857 204 aa6.11□□□□□ -1.43
HMGXB3-205ENST00000514469 SMIM13P0DJ93 91 aa6.11□□□□□ -1.43
HMGXB3-205ENST00000514469 HERV-K104P63124 156 aa6.11□□□□□ -1.43
HMGXB3-205ENST00000514469 MEIG1Q5JSS6 88 aa6.1□□□□□ -1.43
HMGXB3-205ENST00000514469 NDUFA12Q9UI09 145 aa6.1□□□□□ -1.43
HMGXB3-205ENST00000514469 H0Y8G0 127 aa6.09□□□□□ -1.43
HMGXB3-205ENST00000514469 SERF1AO75920 110 aa6.09□□□□□ -1.43
HMGXB3-205ENST00000514469 LEPROTL1O95214 131 aa6.09□□□□□ -1.43
HMGXB3-205ENST00000514469 TSPEAR-AS2P59090 65 aa6.09□□□□□ -1.43
HMGXB3-205ENST00000514469 MIR7-3HGQ8N6C7 128 aa6.09□□□□□ -1.43
HMGXB3-205ENST00000514469 LINC00304Q8N9R0 145 aa6.09□□□□□ -1.43
HMGXB3-205ENST00000514469 PLEKHB2Q96CS7 222 aa6.09□□□□□ -1.43
HMGXB3-205ENST00000514469 MUC2Q02817 5179 aa6.09□□□□□ -1.44
HMGXB3-205ENST00000514469 IGKV2D-26A0A0A0MRZ7 120 aa6.08□□□□□ -1.44
HMGXB3-205ENST00000514469 MYMXA0A1B0GTQ4 84 aa6.08□□□□□ -1.44
HMGXB3-205ENST00000514469 PRYO14603 147 aa6.08□□□□□ -1.44
HMGXB3-205ENST00000514469 PLNP26678 52 aa6.08□□□□□ -1.44
HMGXB3-205ENST00000514469 BOD1L2Q8IYS8 172 aa6.08□□□□□ -1.44
HMGXB3-205ENST00000514469 LINC00587B1AMM8 73 aa6.07□□□□□ -1.44
HMGXB3-205ENST00000514469 NCR3O14931 201 aa6.07□□□□□ -1.44
HMGXB3-205ENST00000514469 LEPROTO15243 131 aa6.07□□□□□ -1.44
HMGXB3-205ENST00000514469 ATP6V1G1O75348 118 aa6.07□□□□□ -1.44
HMGXB3-205ENST00000514469 SPRR1AP35321 89 aa6.07□□□□□ -1.44
HMGXB3-205ENST00000514469 HIGD2AQ9BW72 106 aa6.07□□□□□ -1.44
HMGXB3-205ENST00000514469 KCNQ1DNQ9H478 68 aa6.07□□□□□ -1.44
HMGXB3-205ENST00000514469 COLCA2A8K830 154 aa6.06□□□□□ -1.44
HMGXB3-205ENST00000514469 CTAG1AP78358 180 aa6.06□□□□□ -1.44
HMGXB3-205ENST00000514469 C3orf22Q8N5N4 141 aa6.06□□□□□ -1.44
HMGXB3-205ENST00000514469 LINC00337Q8N6G1 96 aa6.06□□□□□ -1.44
HMGXB3-205ENST00000514469 SPRR4Q96PI1 79 aa6.06□□□□□ -1.44
HMGXB3-205ENST00000514469 MAP1LC3CQ9BXW4 147 aa6.06□□□□□ -1.44
HMGXB3-205ENST00000514469 HSPB8Q9UJY1 196 aa6.06□□□□□ -1.44
HMGXB3-205ENST00000514469 LOC107984156A0A0G2JMH3 177 aa6.05□□□□□ -1.44
HMGXB3-205ENST00000514469 KRTAP4-16G5E9R7 235 aaPredicted RBP6.05□□□□□ -1.44
HMGXB3-205ENST00000514469 DPM2O94777 84 aa6.05□□□□□ -1.44
HMGXB3-205ENST00000514469 ARL17AQ8IVW1 177 aa6.05□□□□□ -1.44
HMGXB3-205ENST00000514469 SLC7A5P1Q8MH63 180 aa6.05□□□□□ -1.44
HMGXB3-205ENST00000514469 ZNF706Q9Y5V0 76 aaPredicted RBP6.05□□□□□ -1.44
HMGXB3-205ENST00000514469 TRBV10-3A0A0K0K1G6 114 aa6.04□□□□□ -1.44
HMGXB3-205ENST00000514469 J3QQQ9 107 aa6.04□□□□□ -1.44
HMGXB3-205ENST00000514469 IGKCP01834 107 aa6.04□□□□□ -1.44
HMGXB3-205ENST00000514469 FABP4P15090 132 aa6.04□□□□□ -1.44
HMGXB3-205ENST00000514469 NMUP48645 174 aa6.04□□□□□ -1.44
HMGXB3-205ENST00000514469 DAND5Q8N907 189 aa6.04□□□□□ -1.44
HMGXB3-205ENST00000514469 RETNLBQ9BQ08 111 aa6.04□□□□□ -1.44
HMGXB3-205ENST00000514469 HERVK_113P61574 105 aa6.03□□□□□ -1.44
HMGXB3-205ENST00000514469 SMCR5Q8TEV8 140 aa6.03□□□□□ -1.44
HMGXB3-205ENST00000514469 PMCHL2Q9BQD1 86 aa6.03□□□□□ -1.44
HMGXB3-205ENST00000514469 MUC17Q685J3 4493 aa6.02□□□□□ -1.45
HMGXB3-205ENST00000514469 TRBV10-2A0A0K0K1G8 114 aa6.02□□□□□ -1.45
HMGXB3-205ENST00000514469 ETDCA0A1B0GVM5 59 aa6.02□□□□□ -1.45
HMGXB3-205ENST00000514469 LGALS3P17931 250 aaKnown RBP6.01□□□□□ -1.45
HMGXB3-205ENST00000514469 DDTP30046 118 aa6.01□□□□□ -1.45
HMGXB3-205ENST00000514469 TPRXLQ17RH7 258 aa6.01□□□□□ -1.45
HMGXB3-205ENST00000514469 SPANXB1Q9NS25 103 aaPredicted RBP6.01□□□□□ -1.45
HMGXB3-205ENST00000514469 B5MCH6 92 aa6□□□□□ -1.45
HMGXB3-205ENST00000514469 NDUFC2O95298 119 aa6□□□□□ -1.45
HMGXB3-205ENST00000514469 S100A12P80511 92 aa6□□□□□ -1.45
HMGXB3-205ENST00000514469 LINC00483Q53H64 154 aa6□□□□□ -1.45
HMGXB3-205ENST00000514469 SPAG11AQ6PDA7 123 aa6□□□□□ -1.45
HMGXB3-205ENST00000514469 E9PLD3 99 aa5.99□□□□□ -1.45
HMGXB3-205ENST00000514469 MIEN1Q9BRT3 115 aa5.99□□□□□ -1.45
HMGXB3-205ENST00000514469 A0A0J9YXY3 114 aa5.98□□□□□ -1.45
HMGXB3-205ENST00000514469 HIST1H2BKO60814 126 aa5.98□□□□□ -1.45
HMGXB3-205ENST00000514469 IGLV6-57P01721 117 aa5.98□□□□□ -1.45
HMGXB3-205ENST00000514469 HIST1H2BJP06899 126 aa5.98□□□□□ -1.45
HMGXB3-205ENST00000514469 HIST1H2BOP23527 126 aa5.98□□□□□ -1.45
HMGXB3-205ENST00000514469 HIST1H2BBP33778 126 aa5.98□□□□□ -1.45
HMGXB3-205ENST00000514469 HIST1H2BDP58876 126 aa5.98□□□□□ -1.45
HMGXB3-205ENST00000514469 HIST1H2BCP62807 126 aa5.98□□□□□ -1.45
HMGXB3-205ENST00000514469 HIST2H2BEQ16778 126 aa5.98□□□□□ -1.45
HMGXB3-205ENST00000514469 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.98□□□□□ -1.45
HMGXB3-205ENST00000514469 SOSTDC1Q6X4U4 206 aa5.98□□□□□ -1.45
HMGXB3-205ENST00000514469 Q6ZRX8 168 aa5.98□□□□□ -1.45
HMGXB3-205ENST00000514469 Q8NBF4 154 aa5.98□□□□□ -1.45
HMGXB3-205ENST00000514469 HIST1H2BHQ93079 126 aa5.98□□□□□ -1.45
HMGXB3-205ENST00000514469 HIST1H2BNQ99877 126 aa5.98□□□□□ -1.45
HMGXB3-205ENST00000514469 HIST1H2BMQ99879 126 aa5.98□□□□□ -1.45
HMGXB3-205ENST00000514469 Q9BRP9 147 aa5.98□□□□□ -1.45
HMGXB3-205ENST00000514469 PPDPFQ9H3Y8 114 aa5.98□□□□□ -1.45
HMGXB3-205ENST00000514469 IGLV7-46A0A075B6I9 117 aa5.97□□□□□ -1.45
HMGXB3-205ENST00000514469 SYS1-DBNDD2H3BUS1 97 aa5.97□□□□□ -1.45
HMGXB3-205ENST00000514469 EIF4EBP3O60516 100 aaPredicted RBP5.97□□□□□ -1.45
HMGXB3-205ENST00000514469 ERC2-IT1O76042 136 aa5.97□□□□□ -1.45
HMGXB3-205ENST00000514469 ADAMTSL4-AS1Q5T5F5 129 aa5.97□□□□□ -1.45
HMGXB3-205ENST00000514469 TRAV23DV6A0A075B6W5 121 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms