RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 Q5XG85 94 aa4.48□□□□□ -1.69
CLCN3-208ENST00000512813 COX7B2Q8TF08 81 aa4.48□□□□□ -1.69
CLCN3-208ENST00000512813 SMIM1B2RUZ4 78 aa4.47□□□□□ -1.69
CLCN3-208ENST00000512813 SPRR2DP22532 72 aa4.47□□□□□ -1.69
CLCN3-208ENST00000512813 LCE1AQ5T7P2 110 aa4.47□□□□□ -1.69
CLCN3-208ENST00000512813 ZC2HC1BQ5TFG8 222 aa4.47□□□□□ -1.69
CLCN3-208ENST00000512813 Q6ZVH6 145 aa4.47□□□□□ -1.69
CLCN3-208ENST00000512813 SFT2D1Q8WV19 159 aa4.47□□□□□ -1.69
CLCN3-208ENST00000512813 SMIM2Q9BVW6 85 aa4.47□□□□□ -1.69
CLCN3-208ENST00000512813 TRBV24-1A0A075B6N3 115 aa4.46□□□□□ -1.7
CLCN3-208ENST00000512813 A0A1B0GUT8 65 aa4.46□□□□□ -1.7
CLCN3-208ENST00000512813 A0A1B0GV50 99 aa4.46□□□□□ -1.7
CLCN3-208ENST00000512813 HERVK_113P63121 156 aa4.46□□□□□ -1.7
CLCN3-208ENST00000512813 MBD3L1Q8WWY6 194 aa4.46□□□□□ -1.7
CLCN3-208ENST00000512813 BORCS7Q96B45 105 aa4.46□□□□□ -1.7
CLCN3-208ENST00000512813 AMELXQ99217 191 aa4.46□□□□□ -1.7
CLCN3-208ENST00000512813 KCNQ1DNQ9H478 68 aa4.46□□□□□ -1.7
CLCN3-208ENST00000512813 PFN2P35080 140 aa4.45□□□□□ -1.7
CLCN3-208ENST00000512813 CD164Q04900 197 aa4.45□□□□□ -1.7
CLCN3-208ENST00000512813 PDZD11Q5EBL8 140 aa4.45□□□□□ -1.7
CLCN3-208ENST00000512813 SMIM29Q86T20 159 aa4.45□□□□□ -1.7
CLCN3-208ENST00000512813 A8MWP4 228 aa4.44□□□□□ -1.7
CLCN3-208ENST00000512813 B5MCH6 92 aa4.44□□□□□ -1.7
CLCN3-208ENST00000512813 ATP5LO75964 103 aa4.44□□□□□ -1.7
CLCN3-208ENST00000512813 LINC00310P59036 64 aa4.44□□□□□ -1.7
CLCN3-208ENST00000512813 SEC11AP67812 179 aa4.44□□□□□ -1.7
CLCN3-208ENST00000512813 Q1RN00 199 aa4.44□□□□□ -1.7
CLCN3-208ENST00000512813 C2orf66Q6UXQ4 117 aa4.44□□□□□ -1.7
CLCN3-208ENST00000512813 Q9BRP9 147 aa4.44□□□□□ -1.7
CLCN3-208ENST00000512813 TRAV9-1A0A075B6T8 112 aa4.43□□□□□ -1.7
CLCN3-208ENST00000512813 K7EN84 100 aa4.43□□□□□ -1.7
CLCN3-208ENST00000512813 SSNA1O43805 119 aa4.43□□□□□ -1.7
CLCN3-208ENST00000512813 MPLKIPQ8TAP9 179 aa4.43□□□□□ -1.7
CLCN3-208ENST00000512813 MANBALQ9NQG1 85 aa4.43□□□□□ -1.7
CLCN3-208ENST00000512813 A0A0G2JQZ4 141 aa4.42□□□□□ -1.7
CLCN3-208ENST00000512813 LINC00862A6NCI5 91 aa4.42□□□□□ -1.7
CLCN3-208ENST00000512813 GIPP09681 153 aaPredicted RBP4.42□□□□□ -1.7
CLCN3-208ENST00000512813 KRTAP10-5P60370 271 aa4.42□□□□□ -1.7
CLCN3-208ENST00000512813 MRPL51Q4U2R6 128 aaKnown RBP4.42□□□□□ -1.7
CLCN3-208ENST00000512813 VCX2Q9H322 139 aa4.42□□□□□ -1.7
CLCN3-208ENST00000512813 H7C2G1 150 aa4.41□□□□□ -1.7
CLCN3-208ENST00000512813 CT83Q5H943 113 aa4.41□□□□□ -1.7
CLCN3-208ENST00000512813 FAM213BQ8TBF2 198 aa4.41□□□□□ -1.7
CLCN3-208ENST00000512813 ENKURQ8TC29 256 aa4.41□□□□□ -1.7
CLCN3-208ENST00000512813 RBM12B-AS1Q9P1G2 102 aa4.41□□□□□ -1.7
CLCN3-208ENST00000512813 HIGD1CA8MV81 97 aa4.4□□□□□ -1.71
CLCN3-208ENST00000512813 GATCO43716 136 aaKnown RBP4.4□□□□□ -1.71
CLCN3-208ENST00000512813 COX17Q14061 63 aa4.4□□□□□ -1.71
CLCN3-208ENST00000512813 ERG28Q9UKR5 140 aa4.4□□□□□ -1.71
CLCN3-208ENST00000512813 FAM104BQ5XKR9 115 aa4.39□□□□□ -1.71
CLCN3-208ENST00000512813 ALKAL2Q6UX46 152 aa4.39□□□□□ -1.71
CLCN3-208ENST00000512813 Q6ZRX8 168 aa4.39□□□□□ -1.71
CLCN3-208ENST00000512813 OBSCN-AS1Q96MR7 158 aa4.39□□□□□ -1.71
CLCN3-208ENST00000512813 GNG13Q9P2W3 67 aa4.39□□□□□ -1.71
CLCN3-208ENST00000512813 LOC107984156A0A0G2JMH3 177 aa4.38□□□□□ -1.71
CLCN3-208ENST00000512813 PDE6DO43924 150 aa4.38□□□□□ -1.71
CLCN3-208ENST00000512813 RAB5AP20339 215 aa4.38□□□□□ -1.71
CLCN3-208ENST00000512813 CKS2P33552 79 aa4.38□□□□□ -1.71
CLCN3-208ENST00000512813 ARL17AQ8IVW1 177 aa4.38□□□□□ -1.71
CLCN3-208ENST00000512813 OCC1Q8TAD7 63 aa4.38□□□□□ -1.71
CLCN3-208ENST00000512813 IGLV5-45A0A087WSX0 123 aa4.37□□□□□ -1.71
CLCN3-208ENST00000512813 TRBV10-3A0A0K0K1G6 114 aa4.36□□□□□ -1.71
CLCN3-208ENST00000512813 UMAD1C9J7I0 102 aa4.36□□□□□ -1.71
CLCN3-208ENST00000512813 NPYP01303 97 aa4.36□□□□□ -1.71
CLCN3-208ENST00000512813 HRES1P13985 223 aa4.36□□□□□ -1.71
CLCN3-208ENST00000512813 RIGQ13278 110 aa4.36□□□□□ -1.71
CLCN3-208ENST00000512813 ST20-AS1Q8NBB2 130 aa4.36□□□□□ -1.71
CLCN3-208ENST00000512813 CYSLTR1Q9Y271 337 aa4.36□□□□□ -1.71
CLCN3-208ENST00000512813 LOC389332A0A1B0GUA5 103 aa4.35□□□□□ -1.71
CLCN3-208ENST00000512813 TMEM238LA0A1B0GVL6 79 aa4.35□□□□□ -1.71
CLCN3-208ENST00000512813 H3BS24 57 aa4.35□□□□□ -1.71
CLCN3-208ENST00000512813 MT1BP07438 61 aa4.35□□□□□ -1.71
CLCN3-208ENST00000512813 SPINK8P0C7L1 97 aa4.35□□□□□ -1.71
CLCN3-208ENST00000512813 SPRR1BP22528 89 aa4.35□□□□□ -1.71
CLCN3-208ENST00000512813 SLC25A34Q6PIV7 304 aa4.35□□□□□ -1.71
CLCN3-208ENST00000512813 C5orf52A6NGY3 159 aa4.34□□□□□ -1.71
CLCN3-208ENST00000512813 IGIPA6NJ69 53 aa4.34□□□□□ -1.71
CLCN3-208ENST00000512813 D6R8Y8 96 aa4.34□□□□□ -1.71
CLCN3-208ENST00000512813 NCR3O14931 201 aa4.34□□□□□ -1.71
CLCN3-208ENST00000512813 S100A12P80511 92 aa4.34□□□□□ -1.71
CLCN3-208ENST00000512813 TINCRA0A1B0GVN0 87 aa4.33□□□□□ -1.72
CLCN3-208ENST00000512813 Q5BKY6 102 aa4.33□□□□□ -1.72
CLCN3-208ENST00000512813 PCP2Q8IVA1 136 aa4.33□□□□□ -1.72
CLCN3-208ENST00000512813 ZNF625Q96I27 306 aaPredicted RBP4.33□□□□□ -1.72
CLCN3-208ENST00000512813 PRO1933Q9H354 126 aa4.33□□□□□ -1.72
CLCN3-208ENST00000512813 PAPPA-AS1Q5QFB9 102 aa4.32□□□□□ -1.72
CLCN3-208ENST00000512813 LAMTOR3Q9UHA4 124 aa4.32□□□□□ -1.72
CLCN3-208ENST00000512813 JOSD1Q15040 202 aaPredicted RBP4.31□□□□□ -1.72
CLCN3-208ENST00000512813 A8MUU9 505 aa4.3□□□□□ -1.72
CLCN3-208ENST00000512813 BOD1L2Q8IYS8 172 aa4.3□□□□□ -1.72
CLCN3-208ENST00000512813 NDUFA13Q9P0J0 144 aa4.3□□□□□ -1.72
CLCN3-208ENST00000512813 IGLV5-39A0A0G2JS06 123 aa4.29□□□□□ -1.72
CLCN3-208ENST00000512813 HMSDA8MTL9 139 aa4.29□□□□□ -1.72
CLCN3-208ENST00000512813 TCL1BO95988 128 aa4.29□□□□□ -1.72
CLCN3-208ENST00000512813 Q96NJ1 140 aa4.29□□□□□ -1.72
CLCN3-208ENST00000512813 PPBPP02775 128 aa4.28□□□□□ -1.72
CLCN3-208ENST00000512813 Q5VV11 94 aa4.28□□□□□ -1.72
CLCN3-208ENST00000512813 IGFL1Q6UW32 110 aa4.28□□□□□ -1.72
CLCN3-208ENST00000512813 DSTQ03001 7570 aaKnown RBP4.28□□□□□ -1.72
CLCN3-208ENST00000512813 KRTAP16-1A8MUX0 517 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms