RNA–Protein interactions for RNA: ENST00000506197.2

SMIM20-201, Transcript of small integral membrane protein 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM20, Length 935 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM20-201ENST00000506197 Q6ZSA8 131 aa12.78□□□□□ -0.36
SMIM20-201ENST00000506197 PANO1I0J062 215 aa12.77□□□□□ -0.37
SMIM20-201ENST00000506197 DAND5Q8N907 189 aa12.77□□□□□ -0.37
SMIM20-201ENST00000506197 FAM30AQ9NZY2 134 aa12.77□□□□□ -0.37
SMIM20-201ENST00000506197 C9orf129Q5T035 196 aaKnown RBP12.76□□□□□ -0.37
SMIM20-201ENST00000506197 MIEN1Q9BRT3 115 aa12.76□□□□□ -0.37
SMIM20-201ENST00000506197 ADAMTSL4-AS1Q5T5F5 129 aa12.75□□□□□ -0.37
SMIM20-201ENST00000506197 LITAFQ99732 161 aa12.75□□□□□ -0.37
SMIM20-201ENST00000506197 TP73-AS1Q9UF72 201 aa12.75□□□□□ -0.37
SMIM20-201ENST00000506197 C12orf57Q99622 126 aa12.74□□□□□ -0.37
SMIM20-201ENST00000506197 SPANXDQ9BXN6 97 aa12.73□□□□□ -0.37
SMIM20-201ENST00000506197 SPANXCQ9NY87 97 aa12.73□□□□□ -0.37
SMIM20-201ENST00000506197 A0A087WYN8 130 aa12.72□□□□□ -0.37
SMIM20-201ENST00000506197 NPC2P61916 151 aa12.72□□□□□ -0.37
SMIM20-201ENST00000506197 FAM168BA1KXE4 195 aa12.71□□□□□ -0.37
SMIM20-201ENST00000506197 Q5VSD8 79 aa12.71□□□□□ -0.37
SMIM20-201ENST00000506197 Q6ZVH6 145 aa12.71□□□□□ -0.37
SMIM20-201ENST00000506197 SCXQ7RTU7 201 aa12.71□□□□□ -0.37
SMIM20-201ENST00000506197 FAM19A5Q7Z5A7 132 aaPredicted RBP12.71□□□□□ -0.37
SMIM20-201ENST00000506197 A0A1W2PNN7 141 aa12.7□□□□□ -0.38
SMIM20-201ENST00000506197 SRSF9Q13242 221 aaKnown RBP eCLIP12.7□□□□□ -0.38
SMIM20-201ENST00000506197 COPS9Q8WXC6 57 aa12.7□□□□□ -0.38
SMIM20-201ENST00000506197 SPANXB1Q9NS25 103 aaPredicted RBP12.7□□□□□ -0.38
SMIM20-201ENST00000506197 PLAC8Q9NZF1 115 aa12.7□□□□□ -0.38
SMIM20-201ENST00000506197 UQCR10Q9UDW1 63 aa12.7□□□□□ -0.38
SMIM20-201ENST00000506197 HAMPP81172 84 aa12.69□□□□□ -0.38
SMIM20-201ENST00000506197 RPL24P83731 157 aaKnown RBP12.69□□□□□ -0.38
SMIM20-201ENST00000506197 CIRBP-AS1Q8TBR5 109 aa12.69□□□□□ -0.38
SMIM20-201ENST00000506197 LINC00308Q8TCZ7 52 aa12.69□□□□□ -0.38
SMIM20-201ENST00000506197 PLA2G2DQ9UNK4 145 aa12.69□□□□□ -0.38
SMIM20-201ENST00000506197 SRRM2Q9UQ35 2752 aaKnown RBP12.69□□□□□ -0.38
SMIM20-201ENST00000506197 SERTAD4-AS1Q5TG53 156 aa12.68□□□□□ -0.38
SMIM20-201ENST00000506197 PRO1933Q9H354 126 aa12.68□□□□□ -0.38
SMIM20-201ENST00000506197 HIGD1BQ9P298 99 aa12.68□□□□□ -0.38
SMIM20-201ENST00000506197 DMBT1Q9UGM3 2413 aaPredicted RBP12.67□□□□□ -0.38
SMIM20-201ENST00000506197 LOC107984156A0A0G2JMH3 177 aa12.67□□□□□ -0.38
SMIM20-201ENST00000506197 IFITM1P13164 125 aa12.67□□□□□ -0.38
SMIM20-201ENST00000506197 ARL17AQ8IVW1 177 aa12.67□□□□□ -0.38
SMIM20-201ENST00000506197 LINC00518Q8N0U6 118 aa12.67□□□□□ -0.38
SMIM20-201ENST00000506197 NKAPP1Q8N9T2 125 aa12.67□□□□□ -0.38
SMIM20-201ENST00000506197 SMR3BP02814 79 aaPredicted RBP12.66□□□□□ -0.38
SMIM20-201ENST00000506197 SOSTDC1Q6X4U4 206 aa12.66□□□□□ -0.38
SMIM20-201ENST00000506197 C2orf91Q6ZV80 131 aa12.66□□□□□ -0.38
SMIM20-201ENST00000506197 HIST1H4GQ99525 98 aa12.66□□□□□ -0.38
SMIM20-201ENST00000506197 M0QXV9 152 aa12.65□□□□□ -0.38
SMIM20-201ENST00000506197 INAFM2P0DMQ5 153 aa12.65□□□□□ -0.38
SMIM20-201ENST00000506197 FLG2Q5D862 2391 aaPredicted RBP12.64□□□□□ -0.39
SMIM20-201ENST00000506197 VPREB1P12018 145 aa12.64□□□□□ -0.39
SMIM20-201ENST00000506197 MYCBP2O75592 4640 aa12.63□□□□□ -0.39
SMIM20-201ENST00000506197 IGLV5-37A0A075B6J1 123 aa12.63□□□□□ -0.39
SMIM20-201ENST00000506197 TSTD3H0UI37 97 aa12.63□□□□□ -0.39
SMIM20-201ENST00000506197 MUSTN1Q8IVN3 82 aa12.63□□□□□ -0.39
SMIM20-201ENST00000506197 C22orf24Q9Y442 160 aa12.63□□□□□ -0.39
SMIM20-201ENST00000506197 HERC1Q15751 4861 aa12.62□□□□□ -0.39
SMIM20-201ENST00000506197 EIF4EBP3O60516 100 aaPredicted RBP12.62□□□□□ -0.39
SMIM20-201ENST00000506197 KRTAP7-1Q8IUC3 87 aa12.62□□□□□ -0.39
SMIM20-201ENST00000506197 PPDPFQ9H3Y8 114 aa12.62□□□□□ -0.39
SMIM20-201ENST00000506197 FAM229AH3BQW9 127 aa12.61□□□□□ -0.39
SMIM20-201ENST00000506197 NDUFC2O95298 119 aa12.61□□□□□ -0.39
SMIM20-201ENST00000506197 HNRNPA3P51991 378 aaKnown RBP12.61□□□□□ -0.39
SMIM20-201ENST00000506197 LBHQ53QV2 105 aaPredicted RBP12.61□□□□□ -0.39
SMIM20-201ENST00000506197 PHF5AQ7RTV0 110 aaKnown RBP12.61□□□□□ -0.39
SMIM20-201ENST00000506197 Q8NDZ9 215 aa12.61□□□□□ -0.39
SMIM20-201ENST00000506197 NCR3O14931 201 aa12.6□□□□□ -0.39
SMIM20-201ENST00000506197 MRPL55Q7Z7F7 128 aaKnown RBP12.6□□□□□ -0.39
SMIM20-201ENST00000506197 TAL2Q16559 108 aa12.59□□□□□ -0.39
SMIM20-201ENST00000506197 C7orf33Q8WU49 177 aa12.59□□□□□ -0.39
SMIM20-201ENST00000506197 M0R378 163 aa12.58□□□□□ -0.4
SMIM20-201ENST00000506197 PRR3P79522 188 aaKnown RBP12.58□□□□□ -0.4
SMIM20-201ENST00000506197 GAGE10A6NGK3 116 aa12.57□□□□□ -0.4
SMIM20-201ENST00000506197 UBE2BP63146 152 aa12.57□□□□□ -0.4
SMIM20-201ENST00000506197 TRBV10-2A0A0K0K1G8 114 aa12.56□□□□□ -0.4
SMIM20-201ENST00000506197 HSD52Q0P140 79 aa12.56□□□□□ -0.4
SMIM20-201ENST00000506197 LINC00167Q96N53 147 aa12.55□□□□□ -0.4
SMIM20-201ENST00000506197 CEND1Q8N111 149 aa12.54□□□□□ -0.4
SMIM20-201ENST00000506197 A4D1N5 150 aa12.53□□□□□ -0.4
SMIM20-201ENST00000506197 S100A7L2Q5SY68 101 aa12.53□□□□□ -0.4
SMIM20-201ENST00000506197 RPL37AP8A6NKH3 93 aa12.52□□□□□ -0.41
SMIM20-201ENST00000506197 LINC00528Q8N1L1 170 aa12.51□□□□□ -0.41
SMIM20-201ENST00000506197 OR13C6PQ8NH95 151 aa12.51□□□□□ -0.41
SMIM20-201ENST00000506197 IGKV2-28A0A075B6P5 120 aa12.5□□□□□ -0.41
SMIM20-201ENST00000506197 TMEM238LA0A1B0GVL6 79 aa12.5□□□□□ -0.41
SMIM20-201ENST00000506197 A6NJY4 79 aa12.5□□□□□ -0.41
SMIM20-201ENST00000506197 IGKV2D-28P01615 120 aa12.5□□□□□ -0.41
SMIM20-201ENST00000506197 DDTP30046 118 aa12.5□□□□□ -0.41
SMIM20-201ENST00000506197 IGLV1-50A0A075B6I6 118 aa12.48□□□□□ -0.41
SMIM20-201ENST00000506197 TRBV10-3A0A0K0K1G6 114 aa12.48□□□□□ -0.41
SMIM20-201ENST00000506197 PLA2G1BP04054 148 aaKnown RBP12.48□□□□□ -0.41
SMIM20-201ENST00000506197 TRAV13-2A0A0B4J235 113 aa12.47□□□□□ -0.41
SMIM20-201ENST00000506197 A6NDN8 102 aa12.47□□□□□ -0.41
SMIM20-201ENST00000506197 CTAG1AP78358 180 aa12.47□□□□□ -0.41
SMIM20-201ENST00000506197 FXYD2P54710 66 aa12.46□□□□□ -0.41
SMIM20-201ENST00000506197 LINC00337Q8N6G1 96 aa12.46□□□□□ -0.41
SMIM20-201ENST00000506197 TMEM126AQ9H061 195 aa12.46□□□□□ -0.41
SMIM20-201ENST00000506197 CBY1Q9Y3M2 126 aa12.46□□□□□ -0.41
SMIM20-201ENST00000506197 IGLV6-57P01721 117 aa12.45□□□□□ -0.42
SMIM20-201ENST00000506197 RPL37AP61513 92 aaKnown RBP12.45□□□□□ -0.42
SMIM20-201ENST00000506197 KRTAP11-1Q8IUC1 163 aa12.45□□□□□ -0.42
SMIM20-201ENST00000506197 PSORS1C2Q9UIG4 136 aa12.45□□□□□ -0.42
SMIM20-201ENST00000506197 PRYO14603 147 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms