RNA–Protein interactions for RNA: ENST00000504701.5

CDC42SE2-207, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-207ENST00000504701 COX17Q14061 63 aa13.24□□□□□ -0.29
CDC42SE2-207ENST00000504701 TMEM223A0PJW6 202 aa13.23□□□□□ -0.29
CDC42SE2-207ENST00000504701 NDUFA5Q16718 116 aa13.21□□□□□ -0.29
CDC42SE2-207ENST00000504701 IFI27L1Q96BM0 104 aa13.21□□□□□ -0.29
CDC42SE2-207ENST00000504701 LINC00158P58513 81 aa13.2□□□□□ -0.3
CDC42SE2-207ENST00000504701 RPL24P83731 157 aaKnown RBP13.2□□□□□ -0.3
CDC42SE2-207ENST00000504701 RETNLBQ9BQ08 111 aa13.2□□□□□ -0.3
CDC42SE2-207ENST00000504701 CBLN2Q8IUK8 224 aa13.19□□□□□ -0.3
CDC42SE2-207ENST00000504701 FAM19A2Q8N3H0 131 aa13.19□□□□□ -0.3
CDC42SE2-207ENST00000504701 CHCHD1Q96BP2 118 aaKnown RBP13.19□□□□□ -0.3
CDC42SE2-207ENST00000504701 TRAV12-1A0A0B4J245 112 aa13.18□□□□□ -0.3
CDC42SE2-207ENST00000504701 SMIM13P0DJ93 91 aa13.17□□□□□ -0.3
CDC42SE2-207ENST00000504701 FAM229BQ4G0N7 80 aa13.17□□□□□ -0.3
CDC42SE2-207ENST00000504701 C3orf22Q8N5N4 141 aa13.15□□□□□ -0.3
CDC42SE2-207ENST00000504701 PLEKHB2Q96CS7 222 aa13.15□□□□□ -0.3
CDC42SE2-207ENST00000504701 MUC2Q02817 5179 aa13.15□□□□□ -0.3
CDC42SE2-207ENST00000504701 SFTA2Q6UW10 78 aa13.14□□□□□ -0.31
CDC42SE2-207ENST00000504701 LINC00304Q8N9R0 145 aa13.14□□□□□ -0.31
CDC42SE2-207ENST00000504701 H0Y8G0 127 aa13.13□□□□□ -0.31
CDC42SE2-207ENST00000504701 HIGD2AQ9BW72 106 aa13.13□□□□□ -0.31
CDC42SE2-207ENST00000504701 NCR3O14931 201 aa13.12□□□□□ -0.31
CDC42SE2-207ENST00000504701 LINC00310P59036 64 aa13.12□□□□□ -0.31
CDC42SE2-207ENST00000504701 IGKV2D-26A0A0A0MRZ7 120 aa13.11□□□□□ -0.31
CDC42SE2-207ENST00000504701 MIR7-3HGQ8N6C7 128 aa13.11□□□□□ -0.31
CDC42SE2-207ENST00000504701 HSBP1O75506 76 aa13.1□□□□□ -0.31
CDC42SE2-207ENST00000504701 TSPEAR-AS2P59090 65 aa13.1□□□□□ -0.31
CDC42SE2-207ENST00000504701 MEIG1Q5JSS6 88 aa13.1□□□□□ -0.31
CDC42SE2-207ENST00000504701 TRGC2P03986 189 aa13.09□□□□□ -0.31
CDC42SE2-207ENST00000504701 BOD1L2Q8IYS8 172 aa13.09□□□□□ -0.31
CDC42SE2-207ENST00000504701 NDUFA12Q9UI09 145 aa13.07□□□□□ -0.32
CDC42SE2-207ENST00000504701 SERF1AO75920 110 aa13.06□□□□□ -0.32
CDC42SE2-207ENST00000504701 SPRR4Q96PI1 79 aa13.06□□□□□ -0.32
CDC42SE2-207ENST00000504701 ATP6V1G1O75348 118 aa13.04□□□□□ -0.32
CDC42SE2-207ENST00000504701 DAND5Q8N907 189 aa13.04□□□□□ -0.32
CDC42SE2-207ENST00000504701 PMCHL2Q9BQD1 86 aa13.03□□□□□ -0.32
CDC42SE2-207ENST00000504701 PRYO14603 147 aa13.02□□□□□ -0.33
CDC42SE2-207ENST00000504701 HERV-K104P63124 156 aa13.02□□□□□ -0.33
CDC42SE2-207ENST00000504701 TRBV10-3A0A0K0K1G6 114 aa13.01□□□□□ -0.33
CDC42SE2-207ENST00000504701 KRTAP4-16G5E9R7 235 aaPredicted RBP13.01□□□□□ -0.33
CDC42SE2-207ENST00000504701 LEPROTL1O95214 131 aa13.01□□□□□ -0.33
CDC42SE2-207ENST00000504701 SPRR1AP35321 89 aa13.01□□□□□ -0.33
CDC42SE2-207ENST00000504701 MYMXA0A1B0GTQ4 84 aa12.99□□□□□ -0.33
CDC42SE2-207ENST00000504701 FABP4P15090 132 aa12.99□□□□□ -0.33
CDC42SE2-207ENST00000504701 SLC7A5P1Q8MH63 180 aa12.99□□□□□ -0.33
CDC42SE2-207ENST00000504701 PPDPFQ9H3Y8 114 aa12.99□□□□□ -0.33
CDC42SE2-207ENST00000504701 KCNQ1DNQ9H478 68 aa12.99□□□□□ -0.33
CDC42SE2-207ENST00000504701 LEPROTO15243 131 aa12.98□□□□□ -0.33
CDC42SE2-207ENST00000504701 SMCR5Q8TEV8 140 aa12.98□□□□□ -0.33
CDC42SE2-207ENST00000504701 MUC17Q685J3 4493 aa12.98□□□□□ -0.33
CDC42SE2-207ENST00000504701 LINC00337Q8N6G1 96 aa12.97□□□□□ -0.33
CDC42SE2-207ENST00000504701 IGLV7-46A0A075B6I9 117 aa12.96□□□□□ -0.33
CDC42SE2-207ENST00000504701 ETDCA0A1B0GVM5 59 aa12.94□□□□□ -0.34
CDC42SE2-207ENST00000504701 J3QQQ9 107 aa12.94□□□□□ -0.34
CDC42SE2-207ENST00000504701 ERC2-IT1O76042 136 aa12.93□□□□□ -0.34
CDC42SE2-207ENST00000504701 COLCA2A8K830 154 aa12.92□□□□□ -0.34
CDC42SE2-207ENST00000504701 LINC00587B1AMM8 73 aa12.92□□□□□ -0.34
CDC42SE2-207ENST00000504701 DPM2O94777 84 aa12.92□□□□□ -0.34
CDC42SE2-207ENST00000504701 PLNP26678 52 aa12.92□□□□□ -0.34
CDC42SE2-207ENST00000504701 TPRXLQ17RH7 258 aa12.92□□□□□ -0.34
CDC42SE2-207ENST00000504701 Q8NBF4 154 aa12.92□□□□□ -0.34
CDC42SE2-207ENST00000504701 MAP1LC3CQ9BXW4 147 aa12.92□□□□□ -0.34
CDC42SE2-207ENST00000504701 ZNF706Q9Y5V0 76 aaPredicted RBP12.92□□□□□ -0.34
CDC42SE2-207ENST00000504701 B5MCH6 92 aa12.91□□□□□ -0.34
CDC42SE2-207ENST00000504701 EIF4EBP3O60516 100 aaPredicted RBP12.91□□□□□ -0.34
CDC42SE2-207ENST00000504701 LOC107984156A0A0G2JMH3 177 aa12.9□□□□□ -0.34
CDC42SE2-207ENST00000504701 IGKCP01834 107 aa12.9□□□□□ -0.34
CDC42SE2-207ENST00000504701 ARL17AQ8IVW1 177 aa12.9□□□□□ -0.34
CDC42SE2-207ENST00000504701 CDIP1Q9H305 208 aa12.9□□□□□ -0.34
CDC42SE2-207ENST00000504701 HSPB8Q9UJY1 196 aa12.9□□□□□ -0.34
CDC42SE2-207ENST00000504701 DDTP30046 118 aa12.89□□□□□ -0.35
CDC42SE2-207ENST00000504701 SOSTDC1Q6X4U4 206 aa12.89□□□□□ -0.35
CDC42SE2-207ENST00000504701 NPC2P61916 151 aa12.88□□□□□ -0.35
CDC42SE2-207ENST00000504701 GAGE2AQ6NT46 116 aa12.88□□□□□ -0.35
CDC42SE2-207ENST00000504701 Q9BRP9 147 aa12.88□□□□□ -0.35
CDC42SE2-207ENST00000504701 LGALS3P17931 250 aaKnown RBP12.87□□□□□ -0.35
CDC42SE2-207ENST00000504701 LINC00483Q53H64 154 aa12.87□□□□□ -0.35
CDC42SE2-207ENST00000504701 HERVK_113P61574 105 aa12.86□□□□□ -0.35
CDC42SE2-207ENST00000504701 CTAG1AP78358 180 aa12.86□□□□□ -0.35
CDC42SE2-207ENST00000504701 ADAMTSL4-AS1Q5T5F5 129 aa12.86□□□□□ -0.35
CDC42SE2-207ENST00000504701 SPAG11AQ6PDA7 123 aa12.86□□□□□ -0.35
CDC42SE2-207ENST00000504701 TRBV10-2A0A0K0K1G8 114 aa12.84□□□□□ -0.35
CDC42SE2-207ENST00000504701 FAT4Q6V0I7 4981 aa12.84□□□□□ -0.35
CDC42SE2-207ENST00000504701 IGLV9-49A0A0B4J1Y8 123 aa12.83□□□□□ -0.36
CDC42SE2-207ENST00000504701 NMUP48645 174 aa12.83□□□□□ -0.36
CDC42SE2-207ENST00000504701 SPANXB1Q9NS25 103 aaPredicted RBP12.83□□□□□ -0.36
CDC42SE2-207ENST00000504701 A0A0J9YXY3 114 aa12.82□□□□□ -0.36
CDC42SE2-207ENST00000504701 MOBPQ13875 183 aa12.82□□□□□ -0.36
CDC42SE2-207ENST00000504701 C4orf48Q5BLP8 95 aa12.82□□□□□ -0.36
CDC42SE2-207ENST00000504701 IGLV6-57P01721 117 aa12.81□□□□□ -0.36
CDC42SE2-207ENST00000504701 Q6ZRX8 168 aa12.81□□□□□ -0.36
CDC42SE2-207ENST00000504701 MIEN1Q9BRT3 115 aa12.81□□□□□ -0.36
CDC42SE2-207ENST00000504701 A0A0U1RQV1 116 aa12.8□□□□□ -0.36
CDC42SE2-207ENST00000504701 S100A12P80511 92 aa12.79□□□□□ -0.36
CDC42SE2-207ENST00000504701 S100A7L2Q5SY68 101 aa12.79□□□□□ -0.36
CDC42SE2-207ENST00000504701 E9PLD3 99 aa12.78□□□□□ -0.36
CDC42SE2-207ENST00000504701 NDUFC2O95298 119 aa12.78□□□□□ -0.36
CDC42SE2-207ENST00000504701 LCE2AQ5TA79 106 aaPredicted RBP12.78□□□□□ -0.36
CDC42SE2-207ENST00000504701 TRAV23DV6A0A075B6W5 121 aa12.77□□□□□ -0.37
CDC42SE2-207ENST00000504701 HIST1H2BKO60814 126 aa12.76□□□□□ -0.37
CDC42SE2-207ENST00000504701 HIST1H2BJP06899 126 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms