RNA–Protein interactions for RNA: ENST00000504687.5

LMNA-220, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-220ENST00000504687 LINC01600Q96MT4 127 aa8.69□□□□□ -1.02
LMNA-220ENST00000504687 CSMD3Q7Z407 3707 aa8.68□□□□□ -1.02
LMNA-220ENST00000504687 H7C2G1 150 aa8.68□□□□□ -1.02
LMNA-220ENST00000504687 SLPIP03973 132 aa8.68□□□□□ -1.02
LMNA-220ENST00000504687 CNBPP62633 177 aaKnown RBP8.68□□□□□ -1.02
LMNA-220ENST00000504687 TMEM126AQ9H061 195 aa8.68□□□□□ -1.02
LMNA-220ENST00000504687 H3BMG7 143 aa8.67□□□□□ -1.02
LMNA-220ENST00000504687 M0QXV9 152 aa8.67□□□□□ -1.02
LMNA-220ENST00000504687 ATXN8Q156A1 80 aa8.67□□□□□ -1.02
LMNA-220ENST00000504687 Q6ZRN7 208 aaPredicted RBP8.67□□□□□ -1.02
LMNA-220ENST00000504687 PRO0461Q9UI25 63 aa8.67□□□□□ -1.02
LMNA-220ENST00000504687 PLA2G2DQ9UNK4 145 aa8.67□□□□□ -1.02
LMNA-220ENST00000504687 H0YGX0 51 aa8.65□□□□□ -1.02
LMNA-220ENST00000504687 LST1O00453 97 aa8.65□□□□□ -1.02
LMNA-220ENST00000504687 PSCAO43653 123 aa8.65□□□□□ -1.02
LMNA-220ENST00000504687 Q6ZR54 194 aa8.65□□□□□ -1.02
LMNA-220ENST00000504687 Q6ZRP5 223 aa8.65□□□□□ -1.02
LMNA-220ENST00000504687 Q8NDZ9 215 aa8.65□□□□□ -1.02
LMNA-220ENST00000504687 SMIM11BQ8TCY0 68 aa8.65□□□□□ -1.02
LMNA-220ENST00000504687 LRCOL1A6NCL2 159 aa8.64□□□□□ -1.03
LMNA-220ENST00000504687 IGLV6-57P01721 117 aa8.64□□□□□ -1.03
LMNA-220ENST00000504687 VPREB1P12018 145 aa8.64□□□□□ -1.03
LMNA-220ENST00000504687 C3orf84H3BNL1 204 aa8.63□□□□□ -1.03
LMNA-220ENST00000504687 CBY1Q9Y3M2 126 aa8.63□□□□□ -1.03
LMNA-220ENST00000504687 PLECQ15149 4684 aaKnown RBP8.63□□□□□ -1.03
LMNA-220ENST00000504687 IGLV5-37A0A075B6J1 123 aa8.62□□□□□ -1.03
LMNA-220ENST00000504687 LOC107984640A0A0U1RRK4 108 aa8.62□□□□□ -1.03
LMNA-220ENST00000504687 TRACP01848 142 aa8.62□□□□□ -1.03
LMNA-220ENST00000504687 WFDC2Q14508 124 aa8.62□□□□□ -1.03
LMNA-220ENST00000504687 LINC01620Q4KN68 170 aa8.62□□□□□ -1.03
LMNA-220ENST00000504687 PKIGQ9Y2B9 76 aa8.62□□□□□ -1.03
LMNA-220ENST00000504687 VPS13DQ5THJ4 4388 aa8.62□□□□□ -1.03
LMNA-220ENST00000504687 A0A1B0GX51 115 aa8.61□□□□□ -1.03
LMNA-220ENST00000504687 M0R378 163 aa8.61□□□□□ -1.03
LMNA-220ENST00000504687 PRR3P79522 188 aaKnown RBP8.61□□□□□ -1.03
LMNA-220ENST00000504687 OR13C6PQ8NH95 151 aa8.61□□□□□ -1.03
LMNA-220ENST00000504687 XAGE1AQ9HD64 81 aa8.61□□□□□ -1.03
LMNA-220ENST00000504687 STARD9Q9P2P6 4700 aa8.6□□□□□ -1.03
LMNA-220ENST00000504687 C9orf129Q5T035 196 aaKnown RBP8.6□□□□□ -1.03
LMNA-220ENST00000504687 SMCPP49901 116 aaPredicted RBP8.59□□□□□ -1.03
LMNA-220ENST00000504687 S100A7L2Q5SY68 101 aa8.59□□□□□ -1.03
LMNA-220ENST00000504687 TRBV7-6A0A0J9YX20 115 aa8.58□□□□□ -1.04
LMNA-220ENST00000504687 H3BT86 120 aa8.58□□□□□ -1.04
LMNA-220ENST00000504687 NCR3O14931 201 aa8.58□□□□□ -1.04
LMNA-220ENST00000504687 LECT2O14960 151 aa8.58□□□□□ -1.04
LMNA-220ENST00000504687 GAGE2EQ4V326 116 aa8.58□□□□□ -1.04
LMNA-220ENST00000504687 CLEC2BQ92478 149 aa8.58□□□□□ -1.04
LMNA-220ENST00000504687 GAGE2DQ9UEU5 116 aa8.58□□□□□ -1.04
LMNA-220ENST00000504687 SLC25A20O43772 301 aa8.57□□□□□ -1.04
LMNA-220ENST00000504687 RPL18AQ02543 176 aaKnown RBP8.57□□□□□ -1.04
LMNA-220ENST00000504687 LINC00476Q8WZB0 136 aa8.57□□□□□ -1.04
LMNA-220ENST00000504687 C16orf90A8MZG2 172 aa8.56□□□□□ -1.04
LMNA-220ENST00000504687 C9JAW5 83 aa8.56□□□□□ -1.04
LMNA-220ENST00000504687 C9orf163Q8N9P6 203 aa8.56□□□□□ -1.04
LMNA-220ENST00000504687 TRBV10-3A0A0K0K1G6 114 aa8.55□□□□□ -1.04
LMNA-220ENST00000504687 ANKRD29Q8N6D5 301 aa8.55□□□□□ -1.04
LMNA-220ENST00000504687 TEN1Q86WV5 123 aa8.54□□□□□ -1.04
LMNA-220ENST00000504687 Q8N814 137 aa8.54□□□□□ -1.04
LMNA-220ENST00000504687 FAM218AQ96MZ4 157 aa8.54□□□□□ -1.04
LMNA-220ENST00000504687 LINC00167Q96N53 147 aa8.54□□□□□ -1.04
LMNA-220ENST00000504687 LYSTQ99698 3801 aa8.54□□□□□ -1.04
LMNA-220ENST00000504687 TRAV23DV6A0A075B6W5 121 aa8.53□□□□□ -1.04
LMNA-220ENST00000504687 A0A087WTM6 91 aa8.53□□□□□ -1.04
LMNA-220ENST00000504687 C6orf99Q4VX62 202 aa8.53□□□□□ -1.04
LMNA-220ENST00000504687 KCNQ1DNQ9H478 68 aa8.53□□□□□ -1.04
LMNA-220ENST00000504687 OCIAD2Q56VL3 154 aa8.52□□□□□ -1.05
LMNA-220ENST00000504687 C1orf134Q5TEV5 83 aa8.52□□□□□ -1.05
LMNA-220ENST00000504687 SERTAD4-AS1Q5TG53 156 aa8.52□□□□□ -1.05
LMNA-220ENST00000504687 NKAPP1Q8N9T2 125 aa8.52□□□□□ -1.05
LMNA-220ENST00000504687 TENM2Q9NT68 2774 aa8.52□□□□□ -1.05
LMNA-220ENST00000504687 DNAH6Q9C0G6 4158 aa8.51□□□□□ -1.05
LMNA-220ENST00000504687 M0R2N4 97 aa8.51□□□□□ -1.05
LMNA-220ENST00000504687 ZNF73O43830 326 aaPredicted RBP8.51□□□□□ -1.05
LMNA-220ENST00000504687 SNCGO76070 127 aa8.51□□□□□ -1.05
LMNA-220ENST00000504687 GAGE2BQ13066 116 aa8.51□□□□□ -1.05
LMNA-220ENST00000504687 ETDBQ3ZM63 59 aa8.51□□□□□ -1.05
LMNA-220ENST00000504687 DIRC1Q969H9 104 aa8.51□□□□□ -1.05
LMNA-220ENST00000504687 LINC00474Q9P2X8 69 aa8.51□□□□□ -1.05
LMNA-220ENST00000504687 A0A087WYN8 130 aa8.5□□□□□ -1.05
LMNA-220ENST00000504687 K7ERU9 68 aa8.5□□□□□ -1.05
LMNA-220ENST00000504687 LY6G6CO95867 125 aa8.5□□□□□ -1.05
LMNA-220ENST00000504687 LINC00575Q6W349 94 aa8.5□□□□□ -1.05
LMNA-220ENST00000504687 KRTAP7-1Q8IUC3 87 aa8.5□□□□□ -1.05
LMNA-220ENST00000504687 MTURNQ8N3F0 131 aa8.5□□□□□ -1.05
LMNA-220ENST00000504687 C7orf33Q8WU49 177 aa8.5□□□□□ -1.05
LMNA-220ENST00000504687 A0A096LNI7 61 aa8.49□□□□□ -1.05
LMNA-220ENST00000504687 ELOF1P60002 83 aaKnown RBP8.49□□□□□ -1.05
LMNA-220ENST00000504687 SDIM1Q6ZPB5 146 aa8.49□□□□□ -1.05
LMNA-220ENST00000504687 IGLV1-50A0A075B6I6 118 aa8.48□□□□□ -1.05
LMNA-220ENST00000504687 EPM2AB3EWF7 344 aa8.48□□□□□ -1.05
LMNA-220ENST00000504687 H3BQ85 93 aa8.48□□□□□ -1.05
LMNA-220ENST00000504687 PRYO14603 147 aa8.48□□□□□ -1.05
LMNA-220ENST00000504687 DNAL4O96015 105 aa8.48□□□□□ -1.05
LMNA-220ENST00000504687 PPDPFLQ8WWR9 84 aa8.48□□□□□ -1.05
LMNA-220ENST00000504687 C22orf24Q9Y442 160 aa8.48□□□□□ -1.05
LMNA-220ENST00000504687 ALMS1Q8TCU4 4167 aa8.47□□□□□ -1.05
LMNA-220ENST00000504687 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.47□□□□□ -1.05
LMNA-220ENST00000504687 SPRR1AP35321 89 aa8.47□□□□□ -1.05
LMNA-220ENST00000504687 MRPL55Q7Z7F7 128 aaKnown RBP8.47□□□□□ -1.05
LMNA-220ENST00000504687 J3QR89 54 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms