RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 DNAL4O96015 105 aa14.99□□□□□ -0.01
PCDH1-204ENST00000503492 ZNF561-AS1K7EIQ3 104 aa14.98□□□□□ -0.01
PCDH1-204ENST00000503492 C15orf56Q8N910 161 aa14.98□□□□□ -0.01
PCDH1-204ENST00000503492 C1orf43Q9BWL3 253 aa14.97□□□□□ -0.01
PCDH1-204ENST00000503492 CAMK2N2Q96S95 79 aa14.96□□□□□ -0.02
PCDH1-204ENST00000503492 DNAH10OSP0CZ25 163 aa14.95□□□□□ -0.02
PCDH1-204ENST00000503492 NBEAL1Q6ZS30 2694 aa14.94□□□□□ -0.02
PCDH1-204ENST00000503492 C15orf53Q8NAA6 179 aa14.94□□□□□ -0.02
PCDH1-204ENST00000503492 IGKV2D-24A0A075B6R9 120 aa14.93□□□□□ -0.02
PCDH1-204ENST00000503492 S100A7L2Q5SY68 101 aa14.93□□□□□ -0.02
PCDH1-204ENST00000503492 HUWE1Q7Z6Z7 4374 aaKnown RBP14.93□□□□□ -0.02
PCDH1-204ENST00000503492 FAM240AA0A1B0GVK7 77 aa14.93□□□□□ -0.02
PCDH1-204ENST00000503492 XAGE1AQ9HD64 81 aa14.92□□□□□ -0.02
PCDH1-204ENST00000503492 SLPIP03973 132 aa14.92□□□□□ -0.02
PCDH1-204ENST00000503492 Q6ZRU5 148 aa14.92□□□□□ -0.02
PCDH1-204ENST00000503492 LINC00588Q9Y4M8 146 aa14.92□□□□□ -0.02
PCDH1-204ENST00000503492 RPL18AQ02543 176 aaKnown RBP14.91□□□□□ -0.02
PCDH1-204ENST00000503492 C6orf99Q4VX62 202 aa14.9□□□□□ -0.02
PCDH1-204ENST00000503492 C2orf48Q96LS8 159 aa14.9□□□□□ -0.02
PCDH1-204ENST00000503492 C9orf129Q5T035 196 aaKnown RBP14.89□□□□□ -0.03
PCDH1-204ENST00000503492 IGLV6-57P01721 117 aa14.88□□□□□ -0.03
PCDH1-204ENST00000503492 LINC00167Q96N53 147 aa14.88□□□□□ -0.03
PCDH1-204ENST00000503492 A0A1B0GX51 115 aa14.87□□□□□ -0.03
PCDH1-204ENST00000503492 Q8N814 137 aa14.87□□□□□ -0.03
PCDH1-204ENST00000503492 INAFM2P0DMQ5 153 aa14.85□□□□□ -0.03
PCDH1-204ENST00000503492 ORMDL1Q9P0S3 153 aa14.85□□□□□ -0.03
PCDH1-204ENST00000503492 SNCGO76070 127 aa14.84□□□□□ -0.03
PCDH1-204ENST00000503492 MGAM2Q2M2H8 2515 aa14.83□□□□□ -0.03
PCDH1-204ENST00000503492 NDUFC2-KCTD14E9PQ53 114 aa14.83□□□□□ -0.04
PCDH1-204ENST00000503492 ACYP1P07311 99 aa14.83□□□□□ -0.04
PCDH1-204ENST00000503492 OBSCN-AS1Q96MR7 158 aa14.83□□□□□ -0.04
PCDH1-204ENST00000503492 TRBV10-3A0A0K0K1G6 114 aa14.82□□□□□ -0.04
PCDH1-204ENST00000503492 MDFIQ99750 246 aa14.82□□□□□ -0.04
PCDH1-204ENST00000503492 TTC32Q5I0X7 151 aa14.82□□□□□ -0.04
PCDH1-204ENST00000503492 VPREB1P12018 145 aa14.81□□□□□ -0.04
PCDH1-204ENST00000503492 LINC00575Q6W349 94 aa14.81□□□□□ -0.04
PCDH1-204ENST00000503492 F8WDY8 70 aa14.8□□□□□ -0.04
PCDH1-204ENST00000503492 SYCNQ0VAF6 134 aa14.8□□□□□ -0.04
PCDH1-204ENST00000503492 GAGE2EQ4V326 116 aa14.79□□□□□ -0.04
PCDH1-204ENST00000503492 C14orf132Q9NPU4 83 aa14.79□□□□□ -0.04
PCDH1-204ENST00000503492 GAGE2DQ9UEU5 116 aa14.79□□□□□ -0.04
PCDH1-204ENST00000503492 Q6ZRP5 223 aa14.78□□□□□ -0.04
PCDH1-204ENST00000503492 GAGE2AQ6NT46 116 aa14.77□□□□□ -0.05
PCDH1-204ENST00000503492 TRAV23DV6A0A075B6W5 121 aa14.76□□□□□ -0.05
PCDH1-204ENST00000503492 CASC10Q5T4H9 136 aa14.76□□□□□ -0.05
PCDH1-204ENST00000503492 SMCR5Q8TEV8 140 aa14.75□□□□□ -0.05
PCDH1-204ENST00000503492 UPK3BQ9BT76 320 aa14.75□□□□□ -0.05
PCDH1-204ENST00000503492 GAGE2BQ13066 116 aa14.74□□□□□ -0.05
PCDH1-204ENST00000503492 A0A1B0GV72 72 aa14.74□□□□□ -0.05
PCDH1-204ENST00000503492 hADV29S1A0JD25 119 aa14.74□□□□□ -0.05
PCDH1-204ENST00000503492 TMEM256-PLSCR3K7ERE1 68 aa14.74□□□□□ -0.05
PCDH1-204ENST00000503492 M0R378 163 aa14.73□□□□□ -0.05
PCDH1-204ENST00000503492 USP17L23D6RBM5 183 aa14.72□□□□□ -0.05
PCDH1-204ENST00000503492 SDIM1Q6ZPB5 146 aa14.72□□□□□ -0.05
PCDH1-204ENST00000503492 DIRC1Q969H9 104 aa14.72□□□□□ -0.05
PCDH1-204ENST00000503492 ZNF73O43830 326 aaPredicted RBP14.71□□□□□ -0.05
PCDH1-204ENST00000503492 Q6Q795 121 aa14.71□□□□□ -0.05
PCDH1-204ENST00000503492 DNAH1Q9P2D7 4330 aa14.71□□□□□ -0.06
PCDH1-204ENST00000503492 RMI2Q96E14 147 aa14.69□□□□□ -0.06
PCDH1-204ENST00000503492 JMJD7-PLA2G4BH0Y9G9 81 aa14.67□□□□□ -0.06
PCDH1-204ENST00000503492 LINC00643Q86TS7 51 aa14.66□□□□□ -0.06
PCDH1-204ENST00000503492 DNAH9Q9NYC9 4486 aa14.66□□□□□ -0.06
PCDH1-204ENST00000503492 TLX1NBP0CAT3 122 aa14.66□□□□□ -0.06
PCDH1-204ENST00000503492 COX7BP24311 80 aa14.66□□□□□ -0.06
PCDH1-204ENST00000503492 TRBV7-7A0A0K0K1E9 115 aa14.65□□□□□ -0.07
PCDH1-204ENST00000503492 ELOF1P60002 83 aaKnown RBP14.65□□□□□ -0.07
PCDH1-204ENST00000503492 Q6ZQY7 126 aa14.64□□□□□ -0.07
PCDH1-204ENST00000503492 SERTAD4-AS1Q5TG53 156 aa14.63□□□□□ -0.07
PCDH1-204ENST00000503492 TRBV7-6A0A0J9YX20 115 aa14.63□□□□□ -0.07
PCDH1-204ENST00000503492 B9D2Q9BPU9 175 aa14.63□□□□□ -0.07
PCDH1-204ENST00000503492 CCKP06307 115 aa14.61□□□□□ -0.07
PCDH1-204ENST00000503492 STAB2Q8WWQ8 2551 aa14.61□□□□□ -0.07
PCDH1-204ENST00000503492 COL7A1Q02388 2944 aa14.61□□□□□ -0.07
PCDH1-204ENST00000503492 KRTAP1-5Q9BYS1 174 aa14.61□□□□□ -0.07
PCDH1-204ENST00000503492 LINC00846Q9NV44 126 aa14.61□□□□□ -0.07
PCDH1-204ENST00000503492 APLNQ9ULZ1 77 aa14.6□□□□□ -0.07
PCDH1-204ENST00000503492 NKAPP1Q8N9T2 125 aa14.59□□□□□ -0.07
PCDH1-204ENST00000503492 NDUFV3P56181 108 aaKnown RBP14.58□□□□□ -0.08
PCDH1-204ENST00000503492 C7orf33Q8WU49 177 aa14.58□□□□□ -0.08
PCDH1-204ENST00000503492 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.56□□□□□ -0.08
PCDH1-204ENST00000503492 LINC00528Q8N1L1 170 aa14.56□□□□□ -0.08
PCDH1-204ENST00000503492 PLA2G2DQ9UNK4 145 aa14.56□□□□□ -0.08
PCDH1-204ENST00000503492 ANAPC13Q9BS18 74 aa14.56□□□□□ -0.08
PCDH1-204ENST00000503492 IMUPQ9GZP8 106 aa14.56□□□□□ -0.08
PCDH1-204ENST00000503492 LAMTOR3Q9UHA4 124 aa14.55□□□□□ -0.08
PCDH1-204ENST00000503492 FAM168BA1KXE4 195 aa14.55□□□□□ -0.08
PCDH1-204ENST00000503492 NHLRC4P0CG21 123 aaPredicted RBP14.54□□□□□ -0.08
PCDH1-204ENST00000503492 KCNQ1DNQ9H478 68 aa14.54□□□□□ -0.08
PCDH1-204ENST00000503492 UBE2DNLQ8IWF7 75 aa14.54□□□□□ -0.08
PCDH1-204ENST00000503492 RBM3P98179 157 aaKnown RBP14.53□□□□□ -0.08
PCDH1-204ENST00000503492 H3BQ85 93 aa14.53□□□□□ -0.08
PCDH1-204ENST00000503492 KRTAP7-1Q8IUC3 87 aa14.51□□□□□ -0.09
PCDH1-204ENST00000503492 IGLV5-37A0A075B6J1 123 aa14.51□□□□□ -0.09
PCDH1-204ENST00000503492 Q6ZQT0 140 aa14.49□□□□□ -0.09
PCDH1-204ENST00000503492 LYSTQ99698 3801 aa14.49□□□□□ -0.09
PCDH1-204ENST00000503492 LOC107984640A0A0U1RRK4 108 aa14.48□□□□□ -0.09
PCDH1-204ENST00000503492 LOC110117498A0A087WWA1 95 aa14.48□□□□□ -0.09
PCDH1-204ENST00000503492 DYNC2H1Q8NCM8 4307 aaKnown RBP14.47□□□□□ -0.09
PCDH1-204ENST00000503492 RPL37AP8A6NKH3 93 aa14.47□□□□□ -0.09
PCDH1-204ENST00000503492 Q6JHZ5 121 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 149 ms