RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 LINC00158P58513 81 aa8.56□□□□□ -1.04
ATG4B-223ENST00000493618 TMEM223A0PJW6 202 aa8.55□□□□□ -1.04
ATG4B-223ENST00000493618 NDUFA5Q16718 116 aa8.55□□□□□ -1.04
ATG4B-223ENST00000493618 SVBPQ8N300 66 aa8.55□□□□□ -1.04
ATG4B-223ENST00000493618 RETNLBQ9BQ08 111 aa8.55□□□□□ -1.04
ATG4B-223ENST00000493618 FAM229BQ4G0N7 80 aa8.54□□□□□ -1.04
ATG4B-223ENST00000493618 IFI27L1Q96BM0 104 aa8.54□□□□□ -1.04
ATG4B-223ENST00000493618 YPEL4Q96NS1 127 aa8.54□□□□□ -1.04
ATG4B-223ENST00000493618 LINC00304Q8N9R0 145 aa8.53□□□□□ -1.04
ATG4B-223ENST00000493618 IGKV2D-26A0A0A0MRZ7 120 aa8.52□□□□□ -1.05
ATG4B-223ENST00000493618 SMIM13P0DJ93 91 aa8.52□□□□□ -1.05
ATG4B-223ENST00000493618 SFTA2Q6UW10 78 aa8.52□□□□□ -1.05
ATG4B-223ENST00000493618 CBLN2Q8IUK8 224 aa8.52□□□□□ -1.05
ATG4B-223ENST00000493618 CHCHD1Q96BP2 118 aaKnown RBP8.52□□□□□ -1.05
ATG4B-223ENST00000493618 TRAV12-1A0A0B4J245 112 aa8.51□□□□□ -1.05
ATG4B-223ENST00000493618 FAM19A2Q8N3H0 131 aa8.51□□□□□ -1.05
ATG4B-223ENST00000493618 HIGD2AQ9BW72 106 aa8.51□□□□□ -1.05
ATG4B-223ENST00000493618 H0Y8G0 127 aa8.5□□□□□ -1.05
ATG4B-223ENST00000493618 NCR3O14931 201 aa8.5□□□□□ -1.05
ATG4B-223ENST00000493618 MEIG1Q5JSS6 88 aa8.5□□□□□ -1.05
ATG4B-223ENST00000493618 C3orf22Q8N5N4 141 aa8.5□□□□□ -1.05
ATG4B-223ENST00000493618 PLEKHB2Q96CS7 222 aa8.5□□□□□ -1.05
ATG4B-223ENST00000493618 MUC2Q02817 5179 aa8.5□□□□□ -1.05
ATG4B-223ENST00000493618 ATP6V1G1O75348 118 aa8.49□□□□□ -1.05
ATG4B-223ENST00000493618 HSBP1O75506 76 aa8.47□□□□□ -1.05
ATG4B-223ENST00000493618 BOD1L2Q8IYS8 172 aa8.47□□□□□ -1.05
ATG4B-223ENST00000493618 MIR7-3HGQ8N6C7 128 aa8.47□□□□□ -1.05
ATG4B-223ENST00000493618 SPRR4Q96PI1 79 aa8.45□□□□□ -1.06
ATG4B-223ENST00000493618 KRTAP9-2Q9BYQ4 174 aa8.45□□□□□ -1.06
ATG4B-223ENST00000493618 NDUFA12Q9UI09 145 aa8.45□□□□□ -1.06
ATG4B-223ENST00000493618 PRYO14603 147 aa8.44□□□□□ -1.06
ATG4B-223ENST00000493618 TRGC2P03986 189 aa8.44□□□□□ -1.06
ATG4B-223ENST00000493618 TSPEAR-AS2P59090 65 aa8.44□□□□□ -1.06
ATG4B-223ENST00000493618 MUC17Q685J3 4493 aa8.44□□□□□ -1.06
ATG4B-223ENST00000493618 HERV-K104P63124 156 aa8.43□□□□□ -1.06
ATG4B-223ENST00000493618 IGLV7-46A0A075B6I9 117 aa8.42□□□□□ -1.06
ATG4B-223ENST00000493618 MYMXA0A1B0GTQ4 84 aa8.42□□□□□ -1.06
ATG4B-223ENST00000493618 SERF1AO75920 110 aa8.42□□□□□ -1.06
ATG4B-223ENST00000493618 LINC00310P59036 64 aa8.42□□□□□ -1.06
ATG4B-223ENST00000493618 DAND5Q8N907 189 aa8.42□□□□□ -1.06
ATG4B-223ENST00000493618 PPDPFQ9H3Y8 114 aa8.42□□□□□ -1.06
ATG4B-223ENST00000493618 TRBV10-3A0A0K0K1G6 114 aa8.41□□□□□ -1.06
ATG4B-223ENST00000493618 LEPROTL1O95214 131 aa8.41□□□□□ -1.06
ATG4B-223ENST00000493618 SMCR5Q8TEV8 140 aa8.41□□□□□ -1.06
ATG4B-223ENST00000493618 ETDCA0A1B0GVM5 59 aa8.4□□□□□ -1.06
ATG4B-223ENST00000493618 LEPROTO15243 131 aa8.4□□□□□ -1.06
ATG4B-223ENST00000493618 FABP4P15090 132 aa8.4□□□□□ -1.06
ATG4B-223ENST00000493618 LINC00337Q8N6G1 96 aa8.4□□□□□ -1.06
ATG4B-223ENST00000493618 PMCHL2Q9BQD1 86 aa8.4□□□□□ -1.06
ATG4B-223ENST00000493618 KCNQ1DNQ9H478 68 aa8.4□□□□□ -1.06
ATG4B-223ENST00000493618 ZNF706Q9Y5V0 76 aaPredicted RBP8.4□□□□□ -1.06
ATG4B-223ENST00000493618 SPRR1AP35321 89 aa8.39□□□□□ -1.07
ATG4B-223ENST00000493618 MAP1LC3CQ9BXW4 147 aa8.39□□□□□ -1.07
ATG4B-223ENST00000493618 CDIP1Q9H305 208 aa8.39□□□□□ -1.07
ATG4B-223ENST00000493618 LINC00587B1AMM8 73 aa8.38□□□□□ -1.07
ATG4B-223ENST00000493618 KRTAP4-16G5E9R7 235 aaPredicted RBP8.38□□□□□ -1.07
ATG4B-223ENST00000493618 A0A0U1RQV1 116 aa8.37□□□□□ -1.07
ATG4B-223ENST00000493618 TPRXLQ17RH7 258 aa8.37□□□□□ -1.07
ATG4B-223ENST00000493618 Q8NBF4 154 aa8.37□□□□□ -1.07
ATG4B-223ENST00000493618 J3QQQ9 107 aa8.36□□□□□ -1.07
ATG4B-223ENST00000493618 DPM2O94777 84 aa8.36□□□□□ -1.07
ATG4B-223ENST00000493618 PLNP26678 52 aa8.36□□□□□ -1.07
ATG4B-223ENST00000493618 C4orf48Q5BLP8 95 aa8.36□□□□□ -1.07
ATG4B-223ENST00000493618 B5MCH6 92 aa8.35□□□□□ -1.07
ATG4B-223ENST00000493618 ERC2-IT1O76042 136 aa8.35□□□□□ -1.07
ATG4B-223ENST00000493618 DDTP30046 118 aa8.35□□□□□ -1.07
ATG4B-223ENST00000493618 GAGE2AQ6NT46 116 aa8.35□□□□□ -1.07
ATG4B-223ENST00000493618 SPAG11AQ6PDA7 123 aa8.35□□□□□ -1.07
ATG4B-223ENST00000493618 SLC7A5P1Q8MH63 180 aa8.35□□□□□ -1.07
ATG4B-223ENST00000493618 HSPB8Q9UJY1 196 aa8.35□□□□□ -1.07
ATG4B-223ENST00000493618 IGKCP01834 107 aa8.34□□□□□ -1.07
ATG4B-223ENST00000493618 LGALS3P17931 250 aaKnown RBP8.34□□□□□ -1.07
ATG4B-223ENST00000493618 HERVK_113P61574 105 aa8.34□□□□□ -1.07
ATG4B-223ENST00000493618 NPC2P61916 151 aa8.34□□□□□ -1.07
ATG4B-223ENST00000493618 CTAG1AP78358 180 aa8.34□□□□□ -1.07
ATG4B-223ENST00000493618 S100A12P80511 92 aa8.34□□□□□ -1.07
ATG4B-223ENST00000493618 LOC107984156A0A0G2JMH3 177 aa8.33□□□□□ -1.08
ATG4B-223ENST00000493618 ARL17AQ8IVW1 177 aa8.33□□□□□ -1.08
ATG4B-223ENST00000493618 FAT4Q6V0I7 4981 aa8.32□□□□□ -1.08
ATG4B-223ENST00000493618 IGLV9-49A0A0B4J1Y8 123 aa8.32□□□□□ -1.08
ATG4B-223ENST00000493618 LINC00483Q53H64 154 aa8.32□□□□□ -1.08
ATG4B-223ENST00000493618 Q9BRP9 147 aa8.32□□□□□ -1.08
ATG4B-223ENST00000493618 TRBV10-2A0A0K0K1G8 114 aa8.31□□□□□ -1.08
ATG4B-223ENST00000493618 COLCA2A8K830 154 aa8.31□□□□□ -1.08
ATG4B-223ENST00000493618 NMUP48645 174 aa8.31□□□□□ -1.08
ATG4B-223ENST00000493618 MIEN1Q9BRT3 115 aa8.31□□□□□ -1.08
ATG4B-223ENST00000493618 SPANXB1Q9NS25 103 aaPredicted RBP8.31□□□□□ -1.08
ATG4B-223ENST00000493618 EIF4EBP3O60516 100 aaPredicted RBP8.3□□□□□ -1.08
ATG4B-223ENST00000493618 MOBPQ13875 183 aa8.3□□□□□ -1.08
ATG4B-223ENST00000493618 S100A7L2Q5SY68 101 aa8.3□□□□□ -1.08
ATG4B-223ENST00000493618 SOSTDC1Q6X4U4 206 aa8.3□□□□□ -1.08
ATG4B-223ENST00000493618 KRTAP9-6A0A140TA67 174 aa8.29□□□□□ -1.08
ATG4B-223ENST00000493618 ADAMTSL4-AS1Q5T5F5 129 aa8.29□□□□□ -1.08
ATG4B-223ENST00000493618 A0A0J9YXY3 114 aa8.28□□□□□ -1.08
ATG4B-223ENST00000493618 IGLV6-57P01721 117 aa8.28□□□□□ -1.08
ATG4B-223ENST00000493618 Q6ZRX8 168 aa8.28□□□□□ -1.08
ATG4B-223ENST00000493618 FP248Q71RG6 208 aaPredicted RBP8.28□□□□□ -1.08
ATG4B-223ENST00000493618 TRAV23DV6A0A075B6W5 121 aa8.27□□□□□ -1.09
ATG4B-223ENST00000493618 NDUFC2O95298 119 aa8.27□□□□□ -1.09
ATG4B-223ENST00000493618 SPINK1P00995 79 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms