RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 TIMM17BO60830 172 aa9.91□□□□□ -0.82
TRA2A-208ENST00000490942 KRTAP7-1Q8IUC3 87 aa9.91□□□□□ -0.82
TRA2A-208ENST00000490942 FAT1Q14517 4588 aa9.9□□□□□ -0.82
TRA2A-208ENST00000490942 LOC107984156A0A0G2JMH3 177 aa9.9□□□□□ -0.82
TRA2A-208ENST00000490942 ZNF815PA8K554 130 aa9.9□□□□□ -0.82
TRA2A-208ENST00000490942 RPL24P83731 157 aaKnown RBP9.9□□□□□ -0.82
TRA2A-208ENST00000490942 JOSD1Q15040 202 aaPredicted RBP9.9□□□□□ -0.82
TRA2A-208ENST00000490942 LBHQ53QV2 105 aaPredicted RBP9.9□□□□□ -0.82
TRA2A-208ENST00000490942 FAM19A5Q7Z5A7 132 aaPredicted RBP9.9□□□□□ -0.82
TRA2A-208ENST00000490942 ARL17AQ8IVW1 177 aa9.9□□□□□ -0.82
TRA2A-208ENST00000490942 M0QXV9 152 aa9.89□□□□□ -0.83
TRA2A-208ENST00000490942 MIR7-3HGQ8N6C7 128 aa9.89□□□□□ -0.83
TRA2A-208ENST00000490942 RPL37AP61513 92 aaKnown RBP9.88□□□□□ -0.83
TRA2A-208ENST00000490942 SERTAD4-AS1Q5TG53 156 aa9.88□□□□□ -0.83
TRA2A-208ENST00000490942 KRTAP17-1Q9BYP8 105 aa9.88□□□□□ -0.83
TRA2A-208ENST00000490942 C22orf24Q9Y442 160 aa9.88□□□□□ -0.83
TRA2A-208ENST00000490942 A0A0U1RRA0 63 aa9.87□□□□□ -0.83
TRA2A-208ENST00000490942 LCE2CQ5TA81 110 aa9.87□□□□□ -0.83
TRA2A-208ENST00000490942 KRTAP10-4P60372 401 aaPredicted RBP9.86□□□□□ -0.83
TRA2A-208ENST00000490942 PHF5AQ7RTV0 110 aaKnown RBP9.86□□□□□ -0.83
TRA2A-208ENST00000490942 MRPL55Q7Z7F7 128 aaKnown RBP9.86□□□□□ -0.83
TRA2A-208ENST00000490942 VPREB1P12018 145 aa9.85□□□□□ -0.83
TRA2A-208ENST00000490942 NKAPP1Q8N9T2 125 aa9.85□□□□□ -0.83
TRA2A-208ENST00000490942 LITAFQ99732 161 aa9.85□□□□□ -0.83
TRA2A-208ENST00000490942 Q6ZVH6 145 aa9.84□□□□□ -0.83
TRA2A-208ENST00000490942 PCP2Q8IVA1 136 aa9.84□□□□□ -0.83
TRA2A-208ENST00000490942 TTTY13Q9BZ97 58 aa9.84□□□□□ -0.83
TRA2A-208ENST00000490942 PPDPFQ9H3Y8 114 aa9.84□□□□□ -0.83
TRA2A-208ENST00000490942 TMEM238C9JI98 176 aa9.83□□□□□ -0.84
TRA2A-208ENST00000490942 J3QL48 77 aa9.83□□□□□ -0.84
TRA2A-208ENST00000490942 PRR3P79522 188 aaKnown RBP9.83□□□□□ -0.84
TRA2A-208ENST00000490942 SCGB1D4Q6XE38 83 aa9.83□□□□□ -0.84
TRA2A-208ENST00000490942 MIEN1Q9BRT3 115 aa9.83□□□□□ -0.84
TRA2A-208ENST00000490942 NDUFC2O95298 119 aa9.82□□□□□ -0.84
TRA2A-208ENST00000490942 ADAMTSL4-AS1Q5T5F5 129 aa9.82□□□□□ -0.84
TRA2A-208ENST00000490942 BOD1L2Q8IYS8 172 aa9.82□□□□□ -0.84
TRA2A-208ENST00000490942 UBE2BP63146 152 aa9.81□□□□□ -0.84
TRA2A-208ENST00000490942 DAND5Q8N907 189 aa9.81□□□□□ -0.84
TRA2A-208ENST00000490942 COPS9Q8WXC6 57 aa9.81□□□□□ -0.84
TRA2A-208ENST00000490942 DLEU1O43261 78 aa9.8□□□□□ -0.84
TRA2A-208ENST00000490942 PYY3Q5JQD4 70 aa9.8□□□□□ -0.84
TRA2A-208ENST00000490942 LINC00167Q96N53 147 aa9.8□□□□□ -0.84
TRA2A-208ENST00000490942 VAMP8Q9BV40 100 aa9.8□□□□□ -0.84
TRA2A-208ENST00000490942 SPANXDQ9BXN6 97 aa9.8□□□□□ -0.84
TRA2A-208ENST00000490942 KRTAP4-5Q9BYR2 181 aa9.8□□□□□ -0.84
TRA2A-208ENST00000490942 SPANXCQ9NY87 97 aa9.8□□□□□ -0.84
TRA2A-208ENST00000490942 PSORS1C2Q9UIG4 136 aa9.8□□□□□ -0.84
TRA2A-208ENST00000490942 TRBV10-2A0A0K0K1G8 114 aa9.79□□□□□ -0.84
TRA2A-208ENST00000490942 M0R378 163 aa9.79□□□□□ -0.84
TRA2A-208ENST00000490942 COX8AP10176 69 aa9.79□□□□□ -0.84
TRA2A-208ENST00000490942 IFITM1P13164 125 aa9.78□□□□□ -0.84
TRA2A-208ENST00000490942 Q8NDZ9 215 aa9.78□□□□□ -0.84
TRA2A-208ENST00000490942 LINC00308Q8TCZ7 52 aa9.78□□□□□ -0.84
TRA2A-208ENST00000490942 VPS13BQ7Z7G8 4022 aa9.78□□□□□ -0.84
TRA2A-208ENST00000490942 SPANXB1Q9NS25 103 aaPredicted RBP9.77□□□□□ -0.85
TRA2A-208ENST00000490942 IGLV1-50A0A075B6I6 118 aa9.76□□□□□ -0.85
TRA2A-208ENST00000490942 SPATA45Q537H7 98 aa9.76□□□□□ -0.85
TRA2A-208ENST00000490942 SOSTDC1Q6X4U4 206 aa9.76□□□□□ -0.85
TRA2A-208ENST00000490942 KRTAP11-1Q8IUC1 163 aa9.76□□□□□ -0.85
TRA2A-208ENST00000490942 PAM16Q9Y3D7 125 aa9.76□□□□□ -0.85
TRA2A-208ENST00000490942 INAFM2P0DMQ5 153 aa9.75□□□□□ -0.85
TRA2A-208ENST00000490942 C1orf137Q5JT78 98 aa9.75□□□□□ -0.85
TRA2A-208ENST00000490942 GAGE10A6NGK3 116 aa9.74□□□□□ -0.85
TRA2A-208ENST00000490942 SRRM2Q9UQ35 2752 aaKnown RBP9.73□□□□□ -0.85
TRA2A-208ENST00000490942 IGLV7-43P04211 117 aa9.73□□□□□ -0.85
TRA2A-208ENST00000490942 SRSF9Q13242 221 aaKnown RBP eCLIP9.73□□□□□ -0.85
TRA2A-208ENST00000490942 SPINK6Q6UWN8 80 aa9.73□□□□□ -0.85
TRA2A-208ENST00000490942 LINC00518Q8N0U6 118 aa9.73□□□□□ -0.85
TRA2A-208ENST00000490942 RPL37AP8A6NKH3 93 aa9.72□□□□□ -0.85
TRA2A-208ENST00000490942 EIF4EBP3O60516 100 aaPredicted RBP9.72□□□□□ -0.85
TRA2A-208ENST00000490942 BCE1O60756 84 aa9.72□□□□□ -0.85
TRA2A-208ENST00000490942 S100A12P80511 92 aa9.72□□□□□ -0.85
TRA2A-208ENST00000490942 CBY1Q9Y3M2 126 aa9.72□□□□□ -0.85
TRA2A-208ENST00000490942 NPC2P61916 151 aa9.71□□□□□ -0.86
TRA2A-208ENST00000490942 SLC25A34Q6PIV7 304 aa9.71□□□□□ -0.86
TRA2A-208ENST00000490942 KCNQ1DNQ9H478 68 aa9.71□□□□□ -0.86
TRA2A-208ENST00000490942 HIGD1BQ9P298 99 aa9.71□□□□□ -0.86
TRA2A-208ENST00000490942 IGKV2-28A0A075B6P5 120 aa9.7□□□□□ -0.86
TRA2A-208ENST00000490942 PRYO14603 147 aa9.7□□□□□ -0.86
TRA2A-208ENST00000490942 NCR3O14931 201 aa9.7□□□□□ -0.86
TRA2A-208ENST00000490942 IGKV2D-28P01615 120 aa9.7□□□□□ -0.86
TRA2A-208ENST00000490942 REG3GQ6UW15 175 aa9.7□□□□□ -0.86
TRA2A-208ENST00000490942 ABCA13Q86UQ4 5058 aa9.7□□□□□ -0.86
TRA2A-208ENST00000490942 IGLV6-57P01721 117 aa9.69□□□□□ -0.86
TRA2A-208ENST00000490942 HNRNPA3P51991 378 aaKnown RBP9.69□□□□□ -0.86
TRA2A-208ENST00000490942 C14orf144Q96I85 54 aa9.69□□□□□ -0.86
TRA2A-208ENST00000490942 TMEM126AQ9H061 195 aa9.69□□□□□ -0.86
TRA2A-208ENST00000490942 TRBV10-3A0A0K0K1G6 114 aa9.68□□□□□ -0.86
TRA2A-208ENST00000490942 ZNF861PO60384 105 aa9.68□□□□□ -0.86
TRA2A-208ENST00000490942 DDTP30046 118 aa9.68□□□□□ -0.86
TRA2A-208ENST00000490942 MUSTN1Q8IVN3 82 aa9.68□□□□□ -0.86
TRA2A-208ENST00000490942 SPRR1AP35321 89 aa9.67□□□□□ -0.86
TRA2A-208ENST00000490942 RPL28P46779 137 aaKnown RBP9.67□□□□□ -0.86
TRA2A-208ENST00000490942 S100A7L2Q5SY68 101 aa9.67□□□□□ -0.86
TRA2A-208ENST00000490942 DIRC1Q969H9 104 aa9.67□□□□□ -0.86
TRA2A-208ENST00000490942 H0Y9J4 135 aa9.66□□□□□ -0.86
TRA2A-208ENST00000490942 SMIM6P0DI80 62 aa9.66□□□□□ -0.86
TRA2A-208ENST00000490942 LINC00337Q8N6G1 96 aa9.66□□□□□ -0.86
TRA2A-208ENST00000490942 KRTAP13-1Q8IUC0 172 aa9.65□□□□□ -0.86
TRA2A-208ENST00000490942 LORP23490 312 aaPredicted RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms