RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 LINC01006Q8NI28 216 aa8.52□□□□□ -1.05
HSPG2-211ENST00000486901 SMIM9A6NGZ8 99 aa8.52□□□□□ -1.05
HSPG2-211ENST00000486901 CCKP06307 115 aa8.52□□□□□ -1.05
HSPG2-211ENST00000486901 DEFB135Q30KP9 77 aa8.52□□□□□ -1.05
HSPG2-211ENST00000486901 OTOGQ6ZRI0 2925 aa8.51□□□□□ -1.05
HSPG2-211ENST00000486901 DPH3Q96FX2 82 aa8.51□□□□□ -1.05
HSPG2-211ENST00000486901 CHCHD10Q8WYQ3 142 aaPredicted RBP8.51□□□□□ -1.05
HSPG2-211ENST00000486901 UPK3BQ9BT76 320 aa8.51□□□□□ -1.05
HSPG2-211ENST00000486901 OVOL2Q9BRP0 275 aa8.51□□□□□ -1.05
HSPG2-211ENST00000486901 CSNK1G2-AS1Q8NCQ2 148 aa8.5□□□□□ -1.05
HSPG2-211ENST00000486901 PRB2P02812 416 aaPredicted RBP8.49□□□□□ -1.05
HSPG2-211ENST00000486901 C19orf73Q9NVV2 129 aa8.49□□□□□ -1.05
HSPG2-211ENST00000486901 Q6ZQY7 126 aa8.48□□□□□ -1.05
HSPG2-211ENST00000486901 UBL5Q9BZL1 73 aa8.48□□□□□ -1.05
HSPG2-211ENST00000486901 TRAV10A0A0B4J240 114 aa8.47□□□□□ -1.05
HSPG2-211ENST00000486901 REG3AQ06141 175 aa8.47□□□□□ -1.05
HSPG2-211ENST00000486901 Q8N9L7 120 aa8.47□□□□□ -1.05
HSPG2-211ENST00000486901 KLK12Q9UKR0 248 aa8.47□□□□□ -1.05
HSPG2-211ENST00000486901 TRAV25A0A0B4J276 109 aa8.46□□□□□ -1.05
HSPG2-211ENST00000486901 MRAPQ8TCY5 172 aa8.46□□□□□ -1.05
HSPG2-211ENST00000486901 OBSCN-AS1Q96MR7 158 aa8.46□□□□□ -1.05
HSPG2-211ENST00000486901 TMEM256-PLSCR3K7ERE1 68 aa8.46□□□□□ -1.06
HSPG2-211ENST00000486901 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.46□□□□□ -1.06
HSPG2-211ENST00000486901 RBM3P98179 157 aaKnown RBP8.45□□□□□ -1.06
HSPG2-211ENST00000486901 IGLV1-51P01701 117 aa8.45□□□□□ -1.06
HSPG2-211ENST00000486901 HIGD2BQ4VC39 106 aa8.45□□□□□ -1.06
HSPG2-211ENST00000486901 Q8IZM0 81 aa8.45□□□□□ -1.06
HSPG2-211ENST00000486901 RMI2Q96E14 147 aa8.45□□□□□ -1.06
HSPG2-211ENST00000486901 KIAA0087Q14695 138 aa8.44□□□□□ -1.06
HSPG2-211ENST00000486901 SPAG11BQ08648 103 aa8.44□□□□□ -1.06
HSPG2-211ENST00000486901 CYSRT1A8MQ03 144 aa8.43□□□□□ -1.06
HSPG2-211ENST00000486901 JMJD7-PLA2G4BH0Y9G9 81 aa8.43□□□□□ -1.06
HSPG2-211ENST00000486901 PRO0255Q9UI72 69 aa8.43□□□□□ -1.06
HSPG2-211ENST00000486901 LY6G6DO95868 133 aa8.42□□□□□ -1.06
HSPG2-211ENST00000486901 TMEM258P61165 79 aa8.42□□□□□ -1.06
HSPG2-211ENST00000486901 CELA1Q9UNI1 258 aa8.42□□□□□ -1.06
HSPG2-211ENST00000486901 TRBV10-3A0A0K0K1G6 114 aa8.41□□□□□ -1.06
HSPG2-211ENST00000486901 KRTAP1-3Q8IUG1 177 aa8.41□□□□□ -1.06
HSPG2-211ENST00000486901 DAD1P61803 113 aa8.41□□□□□ -1.06
HSPG2-211ENST00000486901 C5orf47Q569G3 176 aa8.41□□□□□ -1.06
HSPG2-211ENST00000486901 CD164L2Q6UWJ8 174 aa8.41□□□□□ -1.06
HSPG2-211ENST00000486901 LINC01547P58512 204 aaPredicted RBP8.4□□□□□ -1.06
HSPG2-211ENST00000486901 LINC00575Q6W349 94 aa8.4□□□□□ -1.06
HSPG2-211ENST00000486901 DEFB105AQ8NG35 78 aa8.4□□□□□ -1.06
HSPG2-211ENST00000486901 X6R8D5 127 aa8.4□□□□□ -1.06
HSPG2-211ENST00000486901 Q6ZVQ6 151 aa8.4□□□□□ -1.07
HSPG2-211ENST00000486901 OXLD1Q5BKU9 147 aa8.39□□□□□ -1.07
HSPG2-211ENST00000486901 TENM3Q9P273 2699 aa8.39□□□□□ -1.07
HSPG2-211ENST00000486901 KMT2BQ9UMN6 2715 aaPredicted RBP8.38□□□□□ -1.07
HSPG2-211ENST00000486901 Q6ZQT0 140 aa8.38□□□□□ -1.07
HSPG2-211ENST00000486901 IGHV4-28A0A0C4DH34 117 aa8.38□□□□□ -1.07
HSPG2-211ENST00000486901 TM2D3Q9BRN9 247 aa8.38□□□□□ -1.07
HSPG2-211ENST00000486901 KRTAP10-3P60369 221 aa8.37□□□□□ -1.07
HSPG2-211ENST00000486901 F8WEM9 126 aa8.36□□□□□ -1.07
HSPG2-211ENST00000486901 C3orf84H3BNL1 204 aa8.36□□□□□ -1.07
HSPG2-211ENST00000486901 FAM236DA0A1B0GTK5 79 aa8.36□□□□□ -1.07
HSPG2-211ENST00000486901 FAM236CP0DP71 79 aa8.36□□□□□ -1.07
HSPG2-211ENST00000486901 Q5XG85 94 aa8.36□□□□□ -1.07
HSPG2-211ENST00000486901 A0A1B0GUV1 79 aa8.35□□□□□ -1.07
HSPG2-211ENST00000486901 ANK3Q12955 4377 aaKnown RBP8.35□□□□□ -1.07
HSPG2-211ENST00000486901 LINC00474Q9P2X8 69 aa8.34□□□□□ -1.07
HSPG2-211ENST00000486901 ZNF561-AS1K7EIQ3 104 aa8.33□□□□□ -1.08
HSPG2-211ENST00000486901 RETNQ9HD89 108 aa8.33□□□□□ -1.08
HSPG2-211ENST00000486901 BPY2O14599 106 aa8.32□□□□□ -1.08
HSPG2-211ENST00000486901 C6orf48Q9UBA6 75 aa8.32□□□□□ -1.08
HSPG2-211ENST00000486901 MUC7Q8TAX7 377 aa8.32□□□□□ -1.08
HSPG2-211ENST00000486901 LINC00167Q96N53 147 aa8.32□□□□□ -1.08
HSPG2-211ENST00000486901 CSMD3Q7Z407 3707 aa8.32□□□□□ -1.08
HSPG2-211ENST00000486901 H7BZZ5 65 aa8.32□□□□□ -1.08
HSPG2-211ENST00000486901 RPS28P62857 69 aaKnown RBP8.32□□□□□ -1.08
HSPG2-211ENST00000486901 NDUFC2O95298 119 aa8.31□□□□□ -1.08
HSPG2-211ENST00000486901 MPLKIPQ8TAP9 179 aa8.31□□□□□ -1.08
HSPG2-211ENST00000486901 DIRC1Q969H9 104 aa8.31□□□□□ -1.08
HSPG2-211ENST00000486901 LRCOL1A6NCL2 159 aa8.3□□□□□ -1.08
HSPG2-211ENST00000486901 ZNF73O43830 326 aaPredicted RBP8.3□□□□□ -1.08
HSPG2-211ENST00000486901 CMC4P56277 68 aaPredicted RBP8.3□□□□□ -1.08
HSPG2-211ENST00000486901 CAMK2N2Q96S95 79 aa8.3□□□□□ -1.08
HSPG2-211ENST00000486901 LYPD5Q6UWN5 251 aa8.29□□□□□ -1.08
HSPG2-211ENST00000486901 WFDC10BQ8IUB3 73 aa8.29□□□□□ -1.08
HSPG2-211ENST00000486901 C1orf43Q9BWL3 253 aa8.29□□□□□ -1.08
HSPG2-211ENST00000486901 COX7BP24311 80 aa8.28□□□□□ -1.08
HSPG2-211ENST00000486901 COX17Q14061 63 aa8.28□□□□□ -1.08
HSPG2-211ENST00000486901 LINC00336Q6ZUF6 198 aa8.28□□□□□ -1.08
HSPG2-211ENST00000486901 ATP5EP2Q5VTU8 51 aa8.27□□□□□ -1.08
HSPG2-211ENST00000486901 TRAV7A0A075B6U4 112 aa8.27□□□□□ -1.09
HSPG2-211ENST00000486901 KRTAP1-1Q07627 177 aa8.27□□□□□ -1.09
HSPG2-211ENST00000486901 PKIGQ9Y2B9 76 aa8.27□□□□□ -1.09
HSPG2-211ENST00000486901 SRRM2Q9UQ35 2752 aaKnown RBP8.27□□□□□ -1.09
HSPG2-211ENST00000486901 IGLV6-57P01721 117 aa8.26□□□□□ -1.09
HSPG2-211ENST00000486901 Q6ZRU5 148 aa8.26□□□□□ -1.09
HSPG2-211ENST00000486901 A0A0G2JQZ4 141 aa8.25□□□□□ -1.09
HSPG2-211ENST00000486901 A0A1W2PNN7 141 aa8.25□□□□□ -1.09
HSPG2-211ENST00000486901 RPL37AP8A6NKH3 93 aa8.25□□□□□ -1.09
HSPG2-211ENST00000486901 A0A0U1RQV1 116 aa8.25□□□□□ -1.09
HSPG2-211ENST00000486901 STAB2Q8WWQ8 2551 aa8.24□□□□□ -1.09
HSPG2-211ENST00000486901 PRR4Q16378 134 aa8.23□□□□□ -1.09
HSPG2-211ENST00000486901 LINC00612Q8N6U2 182 aa8.23□□□□□ -1.09
HSPG2-211ENST00000486901 NREPQ16612 68 aa8.23□□□□□ -1.09
HSPG2-211ENST00000486901 IGKV2D-24A0A075B6R9 120 aa8.22□□□□□ -1.09
HSPG2-211ENST00000486901 LOC110117498A0A087WWA1 95 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms