RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 FAM19A3Q7Z5A8 133 aa8.75□□□□□ -1.01
VPS52-218ENST00000482399 DPH3Q96FX2 82 aa8.74□□□□□ -1.01
VPS52-218ENST00000482399 FLNBO75369 2602 aaKnown RBP8.74□□□□□ -1.01
VPS52-218ENST00000482399 M0R2N4 97 aa8.74□□□□□ -1.01
VPS52-218ENST00000482399 PKIGQ9Y2B9 76 aa8.74□□□□□ -1.01
VPS52-218ENST00000482399 HIVEP1P15822 2718 aa8.74□□□□□ -1.01
VPS52-218ENST00000482399 TRBV10-3A0A0K0K1G6 114 aa8.73□□□□□ -1.01
VPS52-218ENST00000482399 CAMK2N2Q96S95 79 aa8.73□□□□□ -1.01
VPS52-218ENST00000482399 Q8N9L7 120 aa8.72□□□□□ -1.01
VPS52-218ENST00000482399 CSNK1G2-AS1Q8NCQ2 148 aa8.72□□□□□ -1.01
VPS52-218ENST00000482399 DIRC1Q969H9 104 aa8.72□□□□□ -1.01
VPS52-218ENST00000482399 VWFP04275 2813 aa8.71□□□□□ -1.01
VPS52-218ENST00000482399 FAM236DA0A1B0GTK5 79 aa8.71□□□□□ -1.02
VPS52-218ENST00000482399 FAM236CP0DP71 79 aa8.71□□□□□ -1.02
VPS52-218ENST00000482399 C1orf43Q9BWL3 253 aa8.71□□□□□ -1.02
VPS52-218ENST00000482399 NANOS2P60321 138 aaKnown RBP8.7□□□□□ -1.02
VPS52-218ENST00000482399 LINC00575Q6W349 94 aa8.7□□□□□ -1.02
VPS52-218ENST00000482399 RMI2Q96E14 147 aa8.7□□□□□ -1.02
VPS52-218ENST00000482399 C3orf84H3BNL1 204 aa8.7□□□□□ -1.02
VPS52-218ENST00000482399 C19orf73Q9NVV2 129 aa8.7□□□□□ -1.02
VPS52-218ENST00000482399 NOTCH1P46531 2555 aa8.7□□□□□ -1.02
VPS52-218ENST00000482399 PRB2P02812 416 aaPredicted RBP8.7□□□□□ -1.02
VPS52-218ENST00000482399 Q8NDZ9 215 aa8.7□□□□□ -1.02
VPS52-218ENST00000482399 Q6ZVQ6 151 aa8.69□□□□□ -1.02
VPS52-218ENST00000482399 SPATA3Q8NHX4 192 aa8.69□□□□□ -1.02
VPS52-218ENST00000482399 TRAV10A0A0B4J240 114 aa8.69□□□□□ -1.02
VPS52-218ENST00000482399 A0A1B0GUV1 79 aa8.69□□□□□ -1.02
VPS52-218ENST00000482399 LINC01547P58512 204 aaPredicted RBP8.69□□□□□ -1.02
VPS52-218ENST00000482399 BAHCC1Q9P281 2608 aa8.68□□□□□ -1.02
VPS52-218ENST00000482399 CELA1Q9UNI1 258 aa8.68□□□□□ -1.02
VPS52-218ENST00000482399 COX7BP24311 80 aa8.67□□□□□ -1.02
VPS52-218ENST00000482399 F8WEM9 126 aa8.67□□□□□ -1.02
VPS52-218ENST00000482399 ATP5EP2Q5VTU8 51 aa8.67□□□□□ -1.02
VPS52-218ENST00000482399 KIAA0087Q14695 138 aa8.67□□□□□ -1.02
VPS52-218ENST00000482399 X6R8D5 127 aa8.67□□□□□ -1.02
VPS52-218ENST00000482399 IGKV2D-24A0A075B6R9 120 aa8.66□□□□□ -1.02
VPS52-218ENST00000482399 SPART-AS1P0CW21 52 aa8.66□□□□□ -1.02
VPS52-218ENST00000482399 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.66□□□□□ -1.02
VPS52-218ENST00000482399 LY6G6DO95868 133 aa8.65□□□□□ -1.02
VPS52-218ENST00000482399 COX17Q14061 63 aa8.65□□□□□ -1.02
VPS52-218ENST00000482399 ZNF73O43830 326 aaPredicted RBP8.65□□□□□ -1.03
VPS52-218ENST00000482399 NBEAL1Q6ZS30 2694 aa8.65□□□□□ -1.03
VPS52-218ENST00000482399 NBPF19A0A087WUL8 3843 aa8.64□□□□□ -1.03
VPS52-218ENST00000482399 NDUFC2O95298 119 aa8.64□□□□□ -1.03
VPS52-218ENST00000482399 APOC4P55056 127 aa8.64□□□□□ -1.03
VPS52-218ENST00000482399 A0A0U1RQV1 116 aa8.64□□□□□ -1.03
VPS52-218ENST00000482399 NREPQ16612 68 aa8.64□□□□□ -1.03
VPS52-218ENST00000482399 Q6ZQT0 140 aa8.64□□□□□ -1.03
VPS52-218ENST00000482399 OBSCN-AS1Q96MR7 158 aa8.64□□□□□ -1.03
VPS52-218ENST00000482399 MPLKIPQ8TAP9 179 aa8.64□□□□□ -1.03
VPS52-218ENST00000482399 MAST4O15021 2626 aa8.63□□□□□ -1.03
VPS52-218ENST00000482399 MUC7Q8TAX7 377 aa8.63□□□□□ -1.03
VPS52-218ENST00000482399 LYRM9A8MSI8 78 aa8.62□□□□□ -1.03
VPS52-218ENST00000482399 OXTP01178 125 aa8.62□□□□□ -1.03
VPS52-218ENST00000482399 ZNF469Q96JG9 3925 aaPredicted RBP8.62□□□□□ -1.03
VPS52-218ENST00000482399 NKAPP1Q8N9T2 125 aa8.62□□□□□ -1.03
VPS52-218ENST00000482399 TM2D3Q9BRN9 247 aa8.61□□□□□ -1.03
VPS52-218ENST00000482399 PDZD2O15018 2839 aa8.61□□□□□ -1.03
VPS52-218ENST00000482399 TRAV7A0A075B6U4 112 aa8.6□□□□□ -1.03
VPS52-218ENST00000482399 RETNQ9HD89 108 aa8.6□□□□□ -1.03
VPS52-218ENST00000482399 C6orf48Q9UBA6 75 aa8.6□□□□□ -1.03
VPS52-218ENST00000482399 WFDC10BQ8IUB3 73 aa8.6□□□□□ -1.03
VPS52-218ENST00000482399 RPS28P62857 69 aaKnown RBP8.59□□□□□ -1.03
VPS52-218ENST00000482399 C9orf66Q5T8R8 295 aa8.59□□□□□ -1.03
VPS52-218ENST00000482399 KRTAP1-3Q8IUG1 177 aa8.59□□□□□ -1.03
VPS52-218ENST00000482399 MRAPQ8TCY5 172 aa8.59□□□□□ -1.03
VPS52-218ENST00000482399 RPL37AP8A6NKH3 93 aa8.59□□□□□ -1.04
VPS52-218ENST00000482399 LRCOL1A6NCL2 159 aa8.58□□□□□ -1.04
VPS52-218ENST00000482399 LELP1Q5T871 98 aa8.58□□□□□ -1.04
VPS52-218ENST00000482399 AKAP9Q99996 3911 aa8.58□□□□□ -1.04
VPS52-218ENST00000482399 BPY2O14599 106 aa8.57□□□□□ -1.04
VPS52-218ENST00000482399 COL6A5A8TX70 2615 aa8.57□□□□□ -1.04
VPS52-218ENST00000482399 TENM1Q9UKZ4 2725 aa8.57□□□□□ -1.04
VPS52-218ENST00000482399 STAB1Q9NY15 2570 aa8.57□□□□□ -1.04
VPS52-218ENST00000482399 Q6ZRU5 148 aa8.56□□□□□ -1.04
VPS52-218ENST00000482399 INAFM1C9JVW0 142 aa8.56□□□□□ -1.04
VPS52-218ENST00000482399 PRR4Q16378 134 aa8.56□□□□□ -1.04
VPS52-218ENST00000482399 BRK1Q8WUW1 75 aa8.56□□□□□ -1.04
VPS52-218ENST00000482399 PDE6GP18545 87 aa8.55□□□□□ -1.04
VPS52-218ENST00000482399 MGAM2Q2M2H8 2515 aa8.55□□□□□ -1.04
VPS52-218ENST00000482399 KRTAP10-3P60369 221 aa8.55□□□□□ -1.04
VPS52-218ENST00000482399 MIFP14174 115 aa8.54□□□□□ -1.04
VPS52-218ENST00000482399 KPRPQ5T749 579 aaPredicted RBP8.54□□□□□ -1.04
VPS52-218ENST00000482399 IGHV4-30-4P0DP06 118 aa8.54□□□□□ -1.04
VPS52-218ENST00000482399 PKD1L1Q8TDX9 2849 aa8.53□□□□□ -1.04
VPS52-218ENST00000482399 FAM30AQ9NZY2 134 aa8.53□□□□□ -1.04
VPS52-218ENST00000482399 H7BZZ5 65 aa8.53□□□□□ -1.04
VPS52-218ENST00000482399 LINC00474Q9P2X8 69 aa8.53□□□□□ -1.04
VPS52-218ENST00000482399 IGLV6-57P01721 117 aa8.52□□□□□ -1.04
VPS52-218ENST00000482399 LYPD5Q6UWN5 251 aa8.52□□□□□ -1.04
VPS52-218ENST00000482399 LINC00167Q96N53 147 aa8.52□□□□□ -1.04
VPS52-218ENST00000482399 OXLD1Q5BKU9 147 aa8.52□□□□□ -1.05
VPS52-218ENST00000482399 C16orf95Q9H693 158 aa8.52□□□□□ -1.05
VPS52-218ENST00000482399 UBE2BP63146 152 aa8.51□□□□□ -1.05
VPS52-218ENST00000482399 Q6ZTC4 211 aa8.51□□□□□ -1.05
VPS52-218ENST00000482399 TMEM254Q8TBM7 123 aa8.51□□□□□ -1.05
VPS52-218ENST00000482399 SERP1Q9Y6X1 66 aa8.51□□□□□ -1.05
VPS52-218ENST00000482399 M0R378 163 aa8.51□□□□□ -1.05
VPS52-218ENST00000482399 LINC00336Q6ZUF6 198 aa8.51□□□□□ -1.05
VPS52-218ENST00000482399 ETDCA0A1B0GVM5 59 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms