RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-238ENST00000479894 A0A087WYN8 130 aa9.72□□□□□ -0.85
HDLBP-238ENST00000479894 PTTG1IPP53801 180 aa9.72□□□□□ -0.85
HDLBP-238ENST00000479894 GAGE2BQ13066 116 aa9.72□□□□□ -0.85
HDLBP-238ENST00000479894 ERG28Q9UKR5 140 aa9.72□□□□□ -0.85
HDLBP-238ENST00000479894 JOSD1Q15040 202 aaPredicted RBP9.71□□□□□ -0.86
HDLBP-238ENST00000479894 REG3GQ6UW15 175 aa9.71□□□□□ -0.86
HDLBP-238ENST00000479894 IGKV2-24A0A0C4DH68 120 aa9.7□□□□□ -0.86
HDLBP-238ENST00000479894 MAJINQ3KP22 176 aa9.7□□□□□ -0.86
HDLBP-238ENST00000479894 MEIG1Q5JSS6 88 aa9.7□□□□□ -0.86
HDLBP-238ENST00000479894 ATOH7Q8N100 152 aa9.7□□□□□ -0.86
HDLBP-238ENST00000479894 SPACA4Q8TDM5 124 aa9.7□□□□□ -0.86
HDLBP-238ENST00000479894 PLAC8Q9NZF1 115 aa9.7□□□□□ -0.86
HDLBP-238ENST00000479894 A0A096LNI7 61 aa9.69□□□□□ -0.86
HDLBP-238ENST00000479894 LINC00158P58513 81 aa9.69□□□□□ -0.86
HDLBP-238ENST00000479894 SPINK6Q6UWN8 80 aa9.69□□□□□ -0.86
HDLBP-238ENST00000479894 PFN2P35080 140 aa9.68□□□□□ -0.86
HDLBP-238ENST00000479894 PRR3P79522 188 aaKnown RBP9.68□□□□□ -0.86
HDLBP-238ENST00000479894 GAGE2EQ4V326 116 aa9.68□□□□□ -0.86
HDLBP-238ENST00000479894 C9orf116Q5BN46 136 aaPredicted RBP9.68□□□□□ -0.86
HDLBP-238ENST00000479894 Q6ZRP5 223 aa9.68□□□□□ -0.86
HDLBP-238ENST00000479894 GAGE2DQ9UEU5 116 aa9.68□□□□□ -0.86
HDLBP-238ENST00000479894 ZNF815PA8K554 130 aa9.67□□□□□ -0.86
HDLBP-238ENST00000479894 TSPEAR-AS2P59090 65 aa9.66□□□□□ -0.86
HDLBP-238ENST00000479894 COPS9Q8WXC6 57 aa9.66□□□□□ -0.86
HDLBP-238ENST00000479894 TIMM17BO60830 172 aa9.65□□□□□ -0.86
HDLBP-238ENST00000479894 VAMP8Q9BV40 100 aa9.65□□□□□ -0.86
HDLBP-238ENST00000479894 CHTF8P0CG12 524 aa9.64□□□□□ -0.87
HDLBP-238ENST00000479894 RPL24P83731 157 aaKnown RBP9.64□□□□□ -0.87
HDLBP-238ENST00000479894 ANKRD39Q53RE8 183 aa9.64□□□□□ -0.87
HDLBP-238ENST00000479894 LCE2AQ5TA79 106 aaPredicted RBP9.64□□□□□ -0.87
HDLBP-238ENST00000479894 SCGB1D4Q6XE38 83 aa9.64□□□□□ -0.87
HDLBP-238ENST00000479894 IGKV2D-26A0A0A0MRZ7 120 aa9.63□□□□□ -0.87
HDLBP-238ENST00000479894 A0A0J9YXY3 114 aa9.63□□□□□ -0.87
HDLBP-238ENST00000479894 SMIM13P0DJ93 91 aa9.63□□□□□ -0.87
HDLBP-238ENST00000479894 MIEN1Q9BRT3 115 aa9.63□□□□□ -0.87
HDLBP-238ENST00000479894 TMEM238C9JI98 176 aa9.62□□□□□ -0.87
HDLBP-238ENST00000479894 S100A12P80511 92 aa9.62□□□□□ -0.87
HDLBP-238ENST00000479894 SND1-IT1Q9HBX3 110 aa9.62□□□□□ -0.87
HDLBP-238ENST00000479894 LBHQ53QV2 105 aaPredicted RBP9.61□□□□□ -0.87
HDLBP-238ENST00000479894 Q6ZVH6 145 aa9.61□□□□□ -0.87
HDLBP-238ENST00000479894 XAGE1AQ9HD64 81 aa9.61□□□□□ -0.87
HDLBP-238ENST00000479894 MIR7-3HGQ8N6C7 128 aa9.6□□□□□ -0.87
HDLBP-238ENST00000479894 SRSF9Q13242 221 aaKnown RBP eCLIP9.59□□□□□ -0.87
HDLBP-238ENST00000479894 SPATA45Q537H7 98 aa9.59□□□□□ -0.87
HDLBP-238ENST00000479894 PYY3Q5JQD4 70 aa9.59□□□□□ -0.87
HDLBP-238ENST00000479894 C9orf129Q5T035 196 aaKnown RBP9.59□□□□□ -0.87
HDLBP-238ENST00000479894 NKAPP1Q8N9T2 125 aa9.59□□□□□ -0.87
HDLBP-238ENST00000479894 TP73-AS1Q9UF72 201 aa9.59□□□□□ -0.87
HDLBP-238ENST00000479894 A0A0U1RRA0 63 aa9.58□□□□□ -0.88
HDLBP-238ENST00000479894 DLEU1O43261 78 aa9.58□□□□□ -0.88
HDLBP-238ENST00000479894 PAM16Q9Y3D7 125 aa9.58□□□□□ -0.88
HDLBP-238ENST00000479894 LOC107984156A0A0G2JMH3 177 aa9.57□□□□□ -0.88
HDLBP-238ENST00000479894 COX8AP10176 69 aa9.57□□□□□ -0.88
HDLBP-238ENST00000479894 PCP2Q8IVA1 136 aa9.57□□□□□ -0.88
HDLBP-238ENST00000479894 ARL17AQ8IVW1 177 aa9.57□□□□□ -0.88
HDLBP-238ENST00000479894 IFITM1P13164 125 aa9.56□□□□□ -0.88
HDLBP-238ENST00000479894 FAM19A5Q7Z5A7 132 aaPredicted RBP9.56□□□□□ -0.88
HDLBP-238ENST00000479894 BOD1L2Q8IYS8 172 aa9.56□□□□□ -0.88
HDLBP-238ENST00000479894 IGLV5-37A0A075B6J1 123 aa9.55□□□□□ -0.88
HDLBP-238ENST00000479894 A0A1W2PNN7 141 aa9.55□□□□□ -0.88
HDLBP-238ENST00000479894 M0QXV9 152 aa9.55□□□□□ -0.88
HDLBP-238ENST00000479894 SMIM6P0DI80 62 aa9.55□□□□□ -0.88
HDLBP-238ENST00000479894 SLC25A34Q6PIV7 304 aa9.55□□□□□ -0.88
HDLBP-238ENST00000479894 TTTY13Q9BZ97 58 aa9.55□□□□□ -0.88
HDLBP-238ENST00000479894 PPDPFQ9H3Y8 114 aa9.55□□□□□ -0.88
HDLBP-238ENST00000479894 SPANXDQ9BXN6 97 aa9.54□□□□□ -0.88
HDLBP-238ENST00000479894 SPANXCQ9NY87 97 aa9.54□□□□□ -0.88
HDLBP-238ENST00000479894 NDUFC2O95298 119 aa9.53□□□□□ -0.88
HDLBP-238ENST00000479894 MRPL55Q7Z7F7 128 aaKnown RBP9.53□□□□□ -0.88
HDLBP-238ENST00000479894 CBY1Q9Y3M2 126 aa9.53□□□□□ -0.88
HDLBP-238ENST00000479894 C22orf24Q9Y442 160 aa9.53□□□□□ -0.88
HDLBP-238ENST00000479894 FAM168BA1KXE4 195 aa9.52□□□□□ -0.89
HDLBP-238ENST00000479894 UBE2BP63146 152 aa9.52□□□□□ -0.89
HDLBP-238ENST00000479894 SPANXB1Q9NS25 103 aaPredicted RBP9.52□□□□□ -0.89
HDLBP-238ENST00000479894 M0R378 163 aa9.51□□□□□ -0.89
HDLBP-238ENST00000479894 ADAMTSL4-AS1Q5T5F5 129 aa9.51□□□□□ -0.89
HDLBP-238ENST00000479894 LINC00518Q8N0U6 118 aa9.51□□□□□ -0.89
HDLBP-238ENST00000479894 DAND5Q8N907 189 aa9.51□□□□□ -0.89
HDLBP-238ENST00000479894 LINC00308Q8TCZ7 52 aa9.51□□□□□ -0.89
HDLBP-238ENST00000479894 LITAFQ99732 161 aa9.51□□□□□ -0.89
HDLBP-238ENST00000479894 PSORS1C2Q9UIG4 136 aa9.51□□□□□ -0.89
HDLBP-238ENST00000479894 TRBV10-2A0A0K0K1G8 114 aa9.5□□□□□ -0.89
HDLBP-238ENST00000479894 VPREB1P12018 145 aa9.5□□□□□ -0.89
HDLBP-238ENST00000479894 C14orf144Q96I85 54 aa9.5□□□□□ -0.89
HDLBP-238ENST00000479894 HIGD1BQ9P298 99 aa9.5□□□□□ -0.89
HDLBP-238ENST00000479894 PHF5AQ7RTV0 110 aaKnown RBP9.48□□□□□ -0.89
HDLBP-238ENST00000479894 LOC105371267A0A1B0GV96 52 aa9.47□□□□□ -0.89
HDLBP-238ENST00000479894 LINC00167Q96N53 147 aa9.47□□□□□ -0.89
HDLBP-238ENST00000479894 HIST1H4GQ99525 98 aa9.47□□□□□ -0.89
HDLBP-238ENST00000479894 UQCR10Q9UDW1 63 aa9.47□□□□□ -0.89
HDLBP-238ENST00000479894 KRTAP7-1Q8IUC3 87 aa9.46□□□□□ -0.9
HDLBP-238ENST00000479894 NPC2P61916 151 aa9.45□□□□□ -0.9
HDLBP-238ENST00000479894 TAL2Q16559 108 aa9.45□□□□□ -0.9
HDLBP-238ENST00000479894 S100A7L2Q5SY68 101 aa9.45□□□□□ -0.9
HDLBP-238ENST00000479894 MUSTN1Q8IVN3 82 aa9.44□□□□□ -0.9
HDLBP-238ENST00000479894 IGLV1-50A0A075B6I6 118 aa9.43□□□□□ -0.9
HDLBP-238ENST00000479894 GAGE10A6NGK3 116 aa9.43□□□□□ -0.9
HDLBP-238ENST00000479894 NCR3O14931 201 aa9.42□□□□□ -0.9
HDLBP-238ENST00000479894 SOSTDC1Q6X4U4 206 aa9.42□□□□□ -0.9
HDLBP-238ENST00000479894 TMEM126AQ9H061 195 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms