RNA–Protein interactions for RNA: ENST00000479446.5

ABCA2-217, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 1 (best)

Gene ABCA2, Length 6,295 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-217ENST00000479446 C6orf48Q9UBA6 75 aa13.56□□□□□ -0.24
ABCA2-217ENST00000479446 CRYGAP11844 174 aa13.55□□□□□ -0.24
ABCA2-217ENST00000479446 BCE1O60756 84 aa13.54□□□□□ -0.24
ABCA2-217ENST00000479446 C1orf134Q5TEV5 83 aa13.53□□□□□ -0.24
ABCA2-217ENST00000479446 SMIM29Q86T20 159 aa13.52□□□□□ -0.25
ABCA2-217ENST00000479446 ZNF462Q96JM2 2506 aa13.51□□□□□ -0.25
ABCA2-217ENST00000479446 RETNLBQ9BQ08 111 aa13.51□□□□□ -0.25
ABCA2-217ENST00000479446 C1orf64Q8NEQ6 169 aa13.51□□□□□ -0.25
ABCA2-217ENST00000479446 LINC00167Q96N53 147 aa13.51□□□□□ -0.25
ABCA2-217ENST00000479446 PTPRBP23467 1997 aa13.5□□□□□ -0.25
ABCA2-217ENST00000479446 X6R8D5 127 aa13.5□□□□□ -0.25
ABCA2-217ENST00000479446 KLK9Q2XQG4 91 aa13.5□□□□□ -0.25
ABCA2-217ENST00000479446 A0A1B0GW54 56 aa13.49□□□□□ -0.25
ABCA2-217ENST00000479446 ELOF1P60002 83 aaKnown RBP13.49□□□□□ -0.25
ABCA2-217ENST00000479446 H3BNG1 76 aa13.48□□□□□ -0.25
ABCA2-217ENST00000479446 MUC4Q99102 2169 aa13.47□□□□□ -0.25
ABCA2-217ENST00000479446 Q6ZQT0 140 aa13.45□□□□□ -0.26
ABCA2-217ENST00000479446 LOC110117498A0A087WWA1 95 aa13.44□□□□□ -0.26
ABCA2-217ENST00000479446 SPINK1P00995 79 aa13.44□□□□□ -0.26
ABCA2-217ENST00000479446 LIMD2Q9BT23 127 aa13.43□□□□□ -0.26
ABCA2-217ENST00000479446 POLQO75417 2590 aa13.43□□□□□ -0.26
ABCA2-217ENST00000479446 NHLRC4P0CG21 123 aaPredicted RBP13.42□□□□□ -0.26
ABCA2-217ENST00000479446 LITAFQ99732 161 aa13.42□□□□□ -0.26
ABCA2-217ENST00000479446 TP53AIP1Q9HCN2 124 aa13.4□□□□□ -0.26
ABCA2-217ENST00000479446 Q8NBF4 154 aa13.4□□□□□ -0.26
ABCA2-217ENST00000479446 RPS28P62857 69 aaKnown RBP13.39□□□□□ -0.27
ABCA2-217ENST00000479446 Q6ZRX8 168 aa13.39□□□□□ -0.27
ABCA2-217ENST00000479446 COL4A2P08572 1712 aa13.38□□□□□ -0.27
ABCA2-217ENST00000479446 COL27A1Q8IZC6 1860 aaPredicted RBP13.37□□□□□ -0.27
ABCA2-217ENST00000479446 PRO0628Q9UI54 55 aa13.37□□□□□ -0.27
ABCA2-217ENST00000479446 MDFIQ99750 246 aa13.35□□□□□ -0.27
ABCA2-217ENST00000479446 ACANP16112 2415 aa13.34□□□□□ -0.27
ABCA2-217ENST00000479446 LINC00476Q8WZB0 136 aa13.34□□□□□ -0.27
ABCA2-217ENST00000479446 MOBPQ13875 183 aa13.33□□□□□ -0.28
ABCA2-217ENST00000479446 Q8NAQ8 132 aa13.33□□□□□ -0.28
ABCA2-217ENST00000479446 ANKRD17O75179 2603 aaKnown RBP13.33□□□□□ -0.28
ABCA2-217ENST00000479446 IGKV2D-30A0A075B6S6 120 aa13.33□□□□□ -0.28
ABCA2-217ENST00000479446 IGKV2-30P06310 120 aa13.33□□□□□ -0.28
ABCA2-217ENST00000479446 FASNP49327 2511 aaKnown RBP13.32□□□□□ -0.28
ABCA2-217ENST00000479446 FSHBP01225 129 aa13.32□□□□□ -0.28
ABCA2-217ENST00000479446 GVQW2A0A096LPI5 108 aaPredicted RBP13.32□□□□□ -0.28
ABCA2-217ENST00000479446 H3BPC8 53 aa13.3□□□□□ -0.28
ABCA2-217ENST00000479446 TM2D3Q9BRN9 247 aa13.28□□□□□ -0.28
ABCA2-217ENST00000479446 ST20-AS1Q8NBB2 130 aa13.27□□□□□ -0.29
ABCA2-217ENST00000479446 PHF5AQ7RTV0 110 aaKnown RBP13.26□□□□□ -0.29
ABCA2-217ENST00000479446 IGLV6-57P01721 117 aa13.26□□□□□ -0.29
ABCA2-217ENST00000479446 ACYP2P14621 99 aa13.25□□□□□ -0.29
ABCA2-217ENST00000479446 C16orf90A8MZG2 172 aa13.25□□□□□ -0.29
ABCA2-217ENST00000479446 EPM2AB3EWF7 344 aa13.24□□□□□ -0.29
ABCA2-217ENST00000479446 C4orf26Q17RF5 130 aa13.24□□□□□ -0.29
ABCA2-217ENST00000479446 VPREB1P12018 145 aa13.24□□□□□ -0.29
ABCA2-217ENST00000479446 A0A1B0GU69 56 aa13.24□□□□□ -0.29
ABCA2-217ENST00000479446 SPACA4Q8TDM5 124 aa13.23□□□□□ -0.29
ABCA2-217ENST00000479446 TRAV22A0A0B4J277 110 aa13.23□□□□□ -0.29
ABCA2-217ENST00000479446 C7orf65Q6ZTY9 151 aa13.23□□□□□ -0.29
ABCA2-217ENST00000479446 LINC00588Q9Y4M8 146 aa13.23□□□□□ -0.29
ABCA2-217ENST00000479446 Q6ZRP5 223 aa13.22□□□□□ -0.29
ABCA2-217ENST00000479446 TRBV7-4A0A0J9YYF1 115 aa13.2□□□□□ -0.3
ABCA2-217ENST00000479446 PCSK5Q92824 1860 aa13.2□□□□□ -0.3
ABCA2-217ENST00000479446 KRTAP24-1Q3LI83 254 aa13.18□□□□□ -0.3
ABCA2-217ENST00000479446 F8P00451 2351 aa13.18□□□□□ -0.3
ABCA2-217ENST00000479446 NBDYA0A0U1RRE5 68 aa13.17□□□□□ -0.3
ABCA2-217ENST00000479446 SPAG11AQ6PDA7 123 aa13.17□□□□□ -0.3
ABCA2-217ENST00000479446 DNAH10OSP0CZ25 163 aa13.16□□□□□ -0.3
ABCA2-217ENST00000479446 EIF4EBP3O60516 100 aaPredicted RBP13.16□□□□□ -0.3
ABCA2-217ENST00000479446 CSNK1G2-AS1Q8NCQ2 148 aa13.16□□□□□ -0.3
ABCA2-217ENST00000479446 RPL37AP61513 92 aaKnown RBP13.15□□□□□ -0.3
ABCA2-217ENST00000479446 RTL8CO15255 209 aa13.13□□□□□ -0.31
ABCA2-217ENST00000479446 ERC2-IT1O76042 136 aa13.12□□□□□ -0.31
ABCA2-217ENST00000479446 LINC00313P59037 77 aa13.11□□□□□ -0.31
ABCA2-217ENST00000479446 KCNQ1DNQ9H478 68 aa13.11□□□□□ -0.31
ABCA2-217ENST00000479446 LINC00528Q8N1L1 170 aa13.1□□□□□ -0.31
ABCA2-217ENST00000479446 CHTF8P0CG12 524 aa13.1□□□□□ -0.31
ABCA2-217ENST00000479446 SERTAD4-AS1Q5TG53 156 aa13.09□□□□□ -0.31
ABCA2-217ENST00000479446 A8MWP4 228 aa13.08□□□□□ -0.32
ABCA2-217ENST00000479446 FAM168BA1KXE4 195 aa13.08□□□□□ -0.32
ABCA2-217ENST00000479446 IGLV1-50A0A075B6I6 118 aa13.08□□□□□ -0.32
ABCA2-217ENST00000479446 K7EQZ3 153 aa13.08□□□□□ -0.32
ABCA2-217ENST00000479446 PRR34Q9NV39 138 aa13.06□□□□□ -0.32
ABCA2-217ENST00000479446 EPG5Q9HCE0 2579 aa13.05□□□□□ -0.32
ABCA2-217ENST00000479446 LOC101927531A0A1B0GV80 90 aa13.05□□□□□ -0.32
ABCA2-217ENST00000479446 TYMSOSQ8TAI1 123 aa13.01□□□□□ -0.33
ABCA2-217ENST00000479446 PRRC2CQ9Y520 2896 aaKnown RBP13.01□□□□□ -0.33
ABCA2-217ENST00000479446 ATP11AUNQ6ZP68 121 aa13□□□□□ -0.33
ABCA2-217ENST00000479446 GIG44P09565 113 aaPredicted RBP13□□□□□ -0.33
ABCA2-217ENST00000479446 C8orf87E5RJ46 101 aa12.99□□□□□ -0.33
ABCA2-217ENST00000479446 MRPL34Q9BQ48 92 aaKnown RBP12.99□□□□□ -0.33
ABCA2-217ENST00000479446 FAM229AH3BQW9 127 aa12.98□□□□□ -0.33
ABCA2-217ENST00000479446 C19orf73Q9NVV2 129 aa12.98□□□□□ -0.33
ABCA2-217ENST00000479446 KLKP1Q107X0 134 aa12.97□□□□□ -0.33
ABCA2-217ENST00000479446 LINC00612Q8N6U2 182 aa12.97□□□□□ -0.33
ABCA2-217ENST00000479446 C15orf56Q8N910 161 aa12.97□□□□□ -0.33
ABCA2-217ENST00000479446 A0A096LNT2 108 aa12.97□□□□□ -0.33
ABCA2-217ENST00000479446 IGFL1Q6UW32 110 aa12.96□□□□□ -0.33
ABCA2-217ENST00000479446 GOLGB1Q14789 3259 aaKnown RBP12.94□□□□□ -0.34
ABCA2-217ENST00000479446 Q8N377 158 aa12.93□□□□□ -0.34
ABCA2-217ENST00000479446 COA5Q86WW8 74 aa12.93□□□□□ -0.34
ABCA2-217ENST00000479446 PLA2G1BP04054 148 aaKnown RBP12.92□□□□□ -0.34
ABCA2-217ENST00000479446 PRR15Q8IV56 129 aa12.91□□□□□ -0.34
ABCA2-217ENST00000479446 Q96NJ1 140 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms