RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 BOD1L2Q8IYS8 172 aa11.09□□□□□ -0.63
PTPN7-209ENST00000477554 SCGB1D4Q6XE38 83 aa11.09□□□□□ -0.63
PTPN7-209ENST00000477554 C6orf48Q9UBA6 75 aa11.09□□□□□ -0.63
PTPN7-209ENST00000477554 A0A0J9YXY3 114 aa11.08□□□□□ -0.64
PTPN7-209ENST00000477554 COX17Q14061 63 aa11.08□□□□□ -0.64
PTPN7-209ENST00000477554 MEIG1Q5JSS6 88 aa11.08□□□□□ -0.64
PTPN7-209ENST00000477554 GAGE2BQ13066 116 aa11.06□□□□□ -0.64
PTPN7-209ENST00000477554 ERG28Q9UKR5 140 aa11.06□□□□□ -0.64
PTPN7-209ENST00000477554 PTTG1IPP53801 180 aa11.05□□□□□ -0.64
PTPN7-209ENST00000477554 UQCR10Q9UDW1 63 aa11.05□□□□□ -0.64
PTPN7-209ENST00000477554 PKIGQ9Y2B9 76 aa11.05□□□□□ -0.64
PTPN7-209ENST00000477554 A0A1W2PNN7 141 aa11.04□□□□□ -0.64
PTPN7-209ENST00000477554 TIMM17BO60830 172 aa11.04□□□□□ -0.64
PTPN7-209ENST00000477554 C9orf116Q5BN46 136 aaPredicted RBP11.04□□□□□ -0.64
PTPN7-209ENST00000477554 TSTD3H0UI37 97 aa11.03□□□□□ -0.64
PTPN7-209ENST00000477554 PFN2P35080 140 aa11.03□□□□□ -0.64
PTPN7-209ENST00000477554 LINC00158P58513 81 aa11.03□□□□□ -0.64
PTPN7-209ENST00000477554 TMEM238C9JI98 176 aa11.02□□□□□ -0.64
PTPN7-209ENST00000477554 TLX1NBP0CAT3 122 aa11.02□□□□□ -0.64
PTPN7-209ENST00000477554 SMIM13P0DJ93 91 aa11.02□□□□□ -0.64
PTPN7-209ENST00000477554 PRO1933Q9H354 126 aa11.02□□□□□ -0.64
PTPN7-209ENST00000477554 LOC107984640A0A0U1RRK4 108 aa11.01□□□□□ -0.65
PTPN7-209ENST00000477554 KRTAP29-1A8MX34 341 aaPredicted RBP11.01□□□□□ -0.65
PTPN7-209ENST00000477554 NDUFC2-KCTD14E9PQ53 114 aa11.01□□□□□ -0.65
PTPN7-209ENST00000477554 RPL18AQ02543 176 aaKnown RBP11.01□□□□□ -0.65
PTPN7-209ENST00000477554 MIEN1Q9BRT3 115 aa11.01□□□□□ -0.65
PTPN7-209ENST00000477554 HIGD1BQ9P298 99 aa11.01□□□□□ -0.65
PTPN7-209ENST00000477554 A0A0U1RRA0 63 aa11□□□□□ -0.65
PTPN7-209ENST00000477554 TP73-AS1Q9UF72 201 aa11□□□□□ -0.65
PTPN7-209ENST00000477554 FAM168BA1KXE4 195 aa10.99□□□□□ -0.65
PTPN7-209ENST00000477554 J3QL48 77 aa10.99□□□□□ -0.65
PTPN7-209ENST00000477554 Q6ZRP5 223 aa10.99□□□□□ -0.65
PTPN7-209ENST00000477554 Q6ZVH6 145 aa10.99□□□□□ -0.65
PTPN7-209ENST00000477554 TNXBP22105 4242 aa10.98□□□□□ -0.65
PTPN7-209ENST00000477554 MIR7-3HGQ8N6C7 128 aa10.98□□□□□ -0.65
PTPN7-209ENST00000477554 LITAFQ99732 161 aa10.98□□□□□ -0.65
PTPN7-209ENST00000477554 SPANXDQ9BXN6 97 aa10.98□□□□□ -0.65
PTPN7-209ENST00000477554 SPANXB1Q9NS25 103 aaPredicted RBP10.98□□□□□ -0.65
PTPN7-209ENST00000477554 SPANXCQ9NY87 97 aa10.98□□□□□ -0.65
PTPN7-209ENST00000477554 PRR3P79522 188 aaKnown RBP10.97□□□□□ -0.65
PTPN7-209ENST00000477554 ADAMTSL4-AS1Q5T5F5 129 aa10.97□□□□□ -0.65
PTPN7-209ENST00000477554 C2orf91Q6ZV80 131 aa10.97□□□□□ -0.65
PTPN7-209ENST00000477554 KRTAP7-1Q8IUC3 87 aa10.97□□□□□ -0.65
PTPN7-209ENST00000477554 SRSF9Q13242 221 aaKnown RBP eCLIP10.96□□□□□ -0.65
PTPN7-209ENST00000477554 COPS9Q8WXC6 57 aa10.96□□□□□ -0.65
PTPN7-209ENST00000477554 GAGE2EQ4V326 116 aa10.95□□□□□ -0.66
PTPN7-209ENST00000477554 KRTAP11-1Q8IUC1 163 aa10.95□□□□□ -0.66
PTPN7-209ENST00000477554 C7orf33Q8WU49 177 aa10.95□□□□□ -0.66
PTPN7-209ENST00000477554 LINC00474Q9P2X8 69 aa10.95□□□□□ -0.66
PTPN7-209ENST00000477554 GAGE2DQ9UEU5 116 aa10.95□□□□□ -0.66
PTPN7-209ENST00000477554 PHF5AQ7RTV0 110 aaKnown RBP10.94□□□□□ -0.66
PTPN7-209ENST00000477554 DAND5Q8N907 189 aa10.94□□□□□ -0.66
PTPN7-209ENST00000477554 IFITM1P13164 125 aa10.93□□□□□ -0.66
PTPN7-209ENST00000477554 HIST1H4GQ99525 98 aa10.93□□□□□ -0.66
PTPN7-209ENST00000477554 SND1-IT1Q9HBX3 110 aa10.93□□□□□ -0.66
PTPN7-209ENST00000477554 TAL2Q16559 108 aa10.92□□□□□ -0.66
PTPN7-209ENST00000477554 LOC107984156A0A0G2JMH3 177 aa10.92□□□□□ -0.66
PTPN7-209ENST00000477554 MT1HL1P0DM35 61 aa10.92□□□□□ -0.66
PTPN7-209ENST00000477554 ARL17AQ8IVW1 177 aa10.92□□□□□ -0.66
PTPN7-209ENST00000477554 LINC00308Q8TCZ7 52 aa10.92□□□□□ -0.66
PTPN7-209ENST00000477554 PPDPFQ9H3Y8 114 aa10.92□□□□□ -0.66
PTPN7-209ENST00000477554 C9orf129Q5T035 196 aaKnown RBP10.91□□□□□ -0.66
PTPN7-209ENST00000477554 XAGE1AQ9HD64 81 aa10.91□□□□□ -0.66
PTPN7-209ENST00000477554 NPC2P61916 151 aa10.9□□□□□ -0.66
PTPN7-209ENST00000477554 HMCN2Q8NDA2 5059 aa10.9□□□□□ -0.67
PTPN7-209ENST00000477554 OXTP01178 125 aa10.89□□□□□ -0.67
PTPN7-209ENST00000477554 HSD52Q0P140 79 aa10.89□□□□□ -0.67
PTPN7-209ENST00000477554 FAM19A5Q7Z5A7 132 aaPredicted RBP10.89□□□□□ -0.67
PTPN7-209ENST00000477554 MUSTN1Q8IVN3 82 aa10.89□□□□□ -0.67
PTPN7-209ENST00000477554 DDTP30046 118 aa10.88□□□□□ -0.67
PTPN7-209ENST00000477554 RPL24P83731 157 aaKnown RBP10.87□□□□□ -0.67
PTPN7-209ENST00000477554 SOSTDC1Q6X4U4 206 aa10.87□□□□□ -0.67
PTPN7-209ENST00000477554 PSORS1C2Q9UIG4 136 aa10.87□□□□□ -0.67
PTPN7-209ENST00000477554 CEND1Q8N111 149 aa10.86□□□□□ -0.67
PTPN7-209ENST00000477554 PLA2G2DQ9UNK4 145 aa10.86□□□□□ -0.67
PTPN7-209ENST00000477554 EIF4EBP3O60516 100 aaPredicted RBP10.84□□□□□ -0.67
PTPN7-209ENST00000477554 NDUFC2O95298 119 aa10.84□□□□□ -0.67
PTPN7-209ENST00000477554 CTAG1AP78358 180 aa10.84□□□□□ -0.67
PTPN7-209ENST00000477554 SERTAD4-AS1Q5TG53 156 aa10.84□□□□□ -0.67
PTPN7-209ENST00000477554 TMEM238LA0A1B0GVL6 79 aa10.83□□□□□ -0.68
PTPN7-209ENST00000477554 A6NJY4 79 aa10.83□□□□□ -0.68
PTPN7-209ENST00000477554 M0R143 59 aa10.81□□□□□ -0.68
PTPN7-209ENST00000477554 VPREB1P12018 145 aa10.81□□□□□ -0.68
PTPN7-209ENST00000477554 NKAPP1Q8N9T2 125 aa10.81□□□□□ -0.68
PTPN7-209ENST00000477554 IGLV5-37A0A075B6J1 123 aa10.8□□□□□ -0.68
PTPN7-209ENST00000477554 A4D1N5 150 aa10.8□□□□□ -0.68
PTPN7-209ENST00000477554 C1orf137Q5JT78 98 aa10.8□□□□□ -0.68
PTPN7-209ENST00000477554 M0QXV9 152 aa10.79□□□□□ -0.68
PTPN7-209ENST00000477554 TRBV10-2A0A0K0K1G8 114 aa10.78□□□□□ -0.68
PTPN7-209ENST00000477554 PCP4L1A6NKN8 68 aa10.78□□□□□ -0.68
PTPN7-209ENST00000477554 FXYD2P54710 66 aa10.78□□□□□ -0.68
PTPN7-209ENST00000477554 Q8NDZ9 215 aa10.78□□□□□ -0.68
PTPN7-209ENST00000477554 BVES-AS1Q5T3Y7 98 aa10.77□□□□□ -0.68
PTPN7-209ENST00000477554 SPINK6Q6UWN8 80 aa10.77□□□□□ -0.68
PTPN7-209ENST00000477554 C22orf24Q9Y442 160 aa10.77□□□□□ -0.68
PTPN7-209ENST00000477554 M0R378 163 aa10.76□□□□□ -0.69
PTPN7-209ENST00000477554 NCR3O14931 201 aa10.76□□□□□ -0.69
PTPN7-209ENST00000477554 HINT1P49773 126 aaPredicted RBP10.76□□□□□ -0.69
PTPN7-209ENST00000477554 IGKV2-28A0A075B6P5 120 aa10.75□□□□□ -0.69
PTPN7-209ENST00000477554 IGKV2D-28P01615 120 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 142.2 ms