RNA–Protein interactions for RNA: ENST00000477335.5

PGK1-204, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 3

Gene PGK1, Length 353 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-204ENST00000477335 RPL18AQ02543 176 aaKnown RBP5.92□□□□□ -1.46
PGK1-204ENST00000477335 GAGE2EQ4V326 116 aa5.92□□□□□ -1.46
PGK1-204ENST00000477335 KRTAP7-1Q8IUC3 87 aa5.92□□□□□ -1.46
PGK1-204ENST00000477335 MIEN1Q9BRT3 115 aa5.92□□□□□ -1.46
PGK1-204ENST00000477335 SND1-IT1Q9HBX3 110 aa5.92□□□□□ -1.46
PGK1-204ENST00000477335 XAGE1AQ9HD64 81 aa5.92□□□□□ -1.46
PGK1-204ENST00000477335 GAGE2DQ9UEU5 116 aa5.92□□□□□ -1.46
PGK1-204ENST00000477335 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.92□□□□□ -1.46
PGK1-204ENST00000477335 EPPK1P58107 5090 aaKnown RBP5.92□□□□□ -1.46
PGK1-204ENST00000477335 PTTG1IPP53801 180 aa5.91□□□□□ -1.46
PGK1-204ENST00000477335 GAGE2BQ13066 116 aa5.91□□□□□ -1.46
PGK1-204ENST00000477335 COX17Q14061 63 aa5.91□□□□□ -1.46
PGK1-204ENST00000477335 SPANXDQ9BXN6 97 aa5.91□□□□□ -1.46
PGK1-204ENST00000477335 SPANXCQ9NY87 97 aa5.91□□□□□ -1.46
PGK1-204ENST00000477335 FAM30AQ9NZY2 134 aa5.91□□□□□ -1.46
PGK1-204ENST00000477335 IGKV2-24A0A0C4DH68 120 aa5.9□□□□□ -1.46
PGK1-204ENST00000477335 FAM168BA1KXE4 195 aa5.9□□□□□ -1.46
PGK1-204ENST00000477335 GCSHP23434 173 aa5.9□□□□□ -1.46
PGK1-204ENST00000477335 SERTAD4-AS1Q5TG53 156 aa5.9□□□□□ -1.46
PGK1-204ENST00000477335 LINC00308Q8TCZ7 52 aa5.9□□□□□ -1.46
PGK1-204ENST00000477335 SPANXB1Q9NS25 103 aaPredicted RBP5.9□□□□□ -1.46
PGK1-204ENST00000477335 HIGD1BQ9P298 99 aa5.9□□□□□ -1.46
PGK1-204ENST00000477335 A0A1W2PNN7 141 aa5.89□□□□□ -1.47
PGK1-204ENST00000477335 C16orf90A8MZG2 172 aa5.89□□□□□ -1.47
PGK1-204ENST00000477335 HNRNPA3P51991 378 aaKnown RBP5.89□□□□□ -1.47
PGK1-204ENST00000477335 MUSTN1Q8IVN3 82 aa5.89□□□□□ -1.47
PGK1-204ENST00000477335 LOC107984156A0A0G2JMH3 177 aa5.88□□□□□ -1.47
PGK1-204ENST00000477335 TMEM238C9JI98 176 aa5.88□□□□□ -1.47
PGK1-204ENST00000477335 PRR3P79522 188 aaKnown RBP5.88□□□□□ -1.47
PGK1-204ENST00000477335 HAMPP81172 84 aa5.88□□□□□ -1.47
PGK1-204ENST00000477335 CIRBPQ14011 172 aaKnown RBP5.88□□□□□ -1.47
PGK1-204ENST00000477335 Q6ZSA8 131 aa5.88□□□□□ -1.47
PGK1-204ENST00000477335 ARL17AQ8IVW1 177 aa5.88□□□□□ -1.47
PGK1-204ENST00000477335 SPACA4Q8TDM5 124 aa5.88□□□□□ -1.47
PGK1-204ENST00000477335 LINC00587B1AMM8 73 aa5.87□□□□□ -1.47
PGK1-204ENST00000477335 TSTD3H0UI37 97 aa5.87□□□□□ -1.47
PGK1-204ENST00000477335 VPREB1P12018 145 aa5.87□□□□□ -1.47
PGK1-204ENST00000477335 CTAG1AP78358 180 aa5.87□□□□□ -1.47
PGK1-204ENST00000477335 IGKV2-28A0A075B6P5 120 aa5.86□□□□□ -1.47
PGK1-204ENST00000477335 EPM2AB3EWF7 344 aa5.86□□□□□ -1.47
PGK1-204ENST00000477335 IGKV2D-28P01615 120 aa5.86□□□□□ -1.47
PGK1-204ENST00000477335 DDTP30046 118 aa5.86□□□□□ -1.47
PGK1-204ENST00000477335 FXYD2P54710 66 aa5.86□□□□□ -1.47
PGK1-204ENST00000477335 HSD52Q0P140 79 aa5.86□□□□□ -1.47
PGK1-204ENST00000477335 SRSF9Q13242 221 aaKnown RBP eCLIP5.86□□□□□ -1.47
PGK1-204ENST00000477335 HIST1H4GQ99525 98 aa5.86□□□□□ -1.47
PGK1-204ENST00000477335 A0A087WYN8 130 aa5.85□□□□□ -1.47
PGK1-204ENST00000477335 Q6ZVH6 145 aa5.85□□□□□ -1.47
PGK1-204ENST00000477335 FAM19A5Q7Z5A7 132 aaPredicted RBP5.85□□□□□ -1.47
PGK1-204ENST00000477335 CEND1Q8N111 149 aa5.85□□□□□ -1.47
PGK1-204ENST00000477335 IGLV5-37A0A075B6J1 123 aa5.84□□□□□ -1.47
PGK1-204ENST00000477335 A4D1N5 150 aa5.84□□□□□ -1.47
PGK1-204ENST00000477335 NCR3O14931 201 aa5.84□□□□□ -1.47
PGK1-204ENST00000477335 IFITM1P13164 125 aa5.84□□□□□ -1.47
PGK1-204ENST00000477335 TAL2Q16559 108 aa5.84□□□□□ -1.47
PGK1-204ENST00000477335 KRTAP11-1Q8IUC1 163 aa5.84□□□□□ -1.47
PGK1-204ENST00000477335 PPDPFQ9H3Y8 114 aa5.84□□□□□ -1.47
PGK1-204ENST00000477335 PLA2G2DQ9UNK4 145 aa5.84□□□□□ -1.47
PGK1-204ENST00000477335 HSPG2P98160 4391 aa5.84□□□□□ -1.47
PGK1-204ENST00000477335 PCP4L1A6NKN8 68 aa5.83□□□□□ -1.48
PGK1-204ENST00000477335 HINT1P49773 126 aaPredicted RBP5.83□□□□□ -1.48
PGK1-204ENST00000477335 BVES-AS1Q5T3Y7 98 aa5.83□□□□□ -1.48
PGK1-204ENST00000477335 SCXQ7RTU7 201 aa5.83□□□□□ -1.48
PGK1-204ENST00000477335 PHF5AQ7RTV0 110 aaKnown RBP5.83□□□□□ -1.48
PGK1-204ENST00000477335 PLAC8Q9NZF1 115 aa5.83□□□□□ -1.48
PGK1-204ENST00000477335 XGP55808 180 aa5.82□□□□□ -1.48
PGK1-204ENST00000477335 LINC00337Q8N6G1 96 aa5.82□□□□□ -1.48
PGK1-204ENST00000477335 CIRBP-AS1Q8TBR5 109 aa5.82□□□□□ -1.48
PGK1-204ENST00000477335 C7orf33Q8WU49 177 aa5.82□□□□□ -1.48
PGK1-204ENST00000477335 LINC00474Q9P2X8 69 aa5.82□□□□□ -1.48
PGK1-204ENST00000477335 PKIGQ9Y2B9 76 aa5.82□□□□□ -1.48
PGK1-204ENST00000477335 C22orf24Q9Y442 160 aa5.82□□□□□ -1.48
PGK1-204ENST00000477335 RYR1P21817 5038 aa5.82□□□□□ -1.48
PGK1-204ENST00000477335 GAGE10A6NGK3 116 aa5.81□□□□□ -1.48
PGK1-204ENST00000477335 K7ERJ3 54 aa5.81□□□□□ -1.48
PGK1-204ENST00000477335 M0QXV9 152 aa5.81□□□□□ -1.48
PGK1-204ENST00000477335 NDUFC2O95298 119 aa5.81□□□□□ -1.48
PGK1-204ENST00000477335 CFC1BP0CG36 223 aa5.81□□□□□ -1.48
PGK1-204ENST00000477335 CFC1P0CG37 223 aa5.81□□□□□ -1.48
PGK1-204ENST00000477335 KRTAP4-8Q9BYQ9 185 aa5.81□□□□□ -1.48
PGK1-204ENST00000477335 RPL24P83731 157 aaKnown RBP5.8□□□□□ -1.48
PGK1-204ENST00000477335 A0A1B0GWB2 263 aa5.79□□□□□ -1.48
PGK1-204ENST00000477335 M0R378 163 aa5.79□□□□□ -1.48
PGK1-204ENST00000477335 MRPL55Q7Z7F7 128 aaKnown RBP5.79□□□□□ -1.48
PGK1-204ENST00000477335 DPH3Q96FX2 82 aa5.79□□□□□ -1.48
PGK1-204ENST00000477335 LINC00167Q96N53 147 aa5.79□□□□□ -1.48
PGK1-204ENST00000477335 KRTAP17-1Q9BYP8 105 aa5.79□□□□□ -1.48
PGK1-204ENST00000477335 FAT1Q14517 4588 aa5.79□□□□□ -1.48
PGK1-204ENST00000477335 BIRC6Q9NR09 4857 aa5.79□□□□□ -1.48
PGK1-204ENST00000477335 TRBV10-3A0A0K0K1G6 114 aa5.78□□□□□ -1.48
PGK1-204ENST00000477335 TRBV10-2A0A0K0K1G8 114 aa5.78□□□□□ -1.48
PGK1-204ENST00000477335 RPL37AP8A6NKH3 93 aa5.78□□□□□ -1.48
PGK1-204ENST00000477335 IGLV6-57P01721 117 aa5.78□□□□□ -1.48
PGK1-204ENST00000477335 NKAPP1Q8N9T2 125 aa5.78□□□□□ -1.48
PGK1-204ENST00000477335 COPS9Q8WXC6 57 aa5.78□□□□□ -1.48
PGK1-204ENST00000477335 SNHG12Q9BXW3 62 aa5.78□□□□□ -1.48
PGK1-204ENST00000477335 NHP2Q9NX24 153 aaKnown RBP5.78□□□□□ -1.48
PGK1-204ENST00000477335 VPS13BQ7Z7G8 4022 aa5.77□□□□□ -1.48
PGK1-204ENST00000477335 IGLV1-50A0A075B6I6 118 aa5.77□□□□□ -1.49
PGK1-204ENST00000477335 A0A0B4J2C4 111 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms