RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 TMEM126AQ9H061 195 aa6.35□□□□□ -1.39
SEC13-214ENST00000476597 MUC2Q02817 5179 aa6.35□□□□□ -1.39
SEC13-214ENST00000476597 TMEM238C9JI98 176 aa6.34□□□□□ -1.39
SEC13-214ENST00000476597 M0R378 163 aa6.34□□□□□ -1.39
SEC13-214ENST00000476597 TSPAN13O95857 204 aa6.34□□□□□ -1.39
SEC13-214ENST00000476597 LINC00158P58513 81 aa6.34□□□□□ -1.39
SEC13-214ENST00000476597 KRTAP13-2Q52LG2 175 aa6.34□□□□□ -1.39
SEC13-214ENST00000476597 FAM229BQ4G0N7 80 aa6.33□□□□□ -1.4
SEC13-214ENST00000476597 FAM19A1Q7Z5A9 133 aa6.33□□□□□ -1.4
SEC13-214ENST00000476597 A0A0U1RRA0 63 aa6.32□□□□□ -1.4
SEC13-214ENST00000476597 PRLHP81277 87 aa6.32□□□□□ -1.4
SEC13-214ENST00000476597 CBLN2Q8IUK8 224 aa6.32□□□□□ -1.4
SEC13-214ENST00000476597 FAM19A2Q8N3H0 131 aa6.32□□□□□ -1.4
SEC13-214ENST00000476597 HSBP1O75506 76 aa6.31□□□□□ -1.4
SEC13-214ENST00000476597 SMIM13P0DJ93 91 aa6.31□□□□□ -1.4
SEC13-214ENST00000476597 PLEKHB2Q96CS7 222 aa6.31□□□□□ -1.4
SEC13-214ENST00000476597 TRGC2P03986 189 aa6.3□□□□□ -1.4
SEC13-214ENST00000476597 ATP6V1G1O75348 118 aa6.29□□□□□ -1.4
SEC13-214ENST00000476597 HERV-K104P63124 156 aa6.29□□□□□ -1.4
SEC13-214ENST00000476597 IGKV2D-26A0A0A0MRZ7 120 aa6.28□□□□□ -1.4
SEC13-214ENST00000476597 LINC00587B1AMM8 73 aa6.28□□□□□ -1.4
SEC13-214ENST00000476597 LINC00310P59036 64 aa6.28□□□□□ -1.4
SEC13-214ENST00000476597 MEIG1Q5JSS6 88 aa6.28□□□□□ -1.4
SEC13-214ENST00000476597 MIR7-3HGQ8N6C7 128 aa6.28□□□□□ -1.4
SEC13-214ENST00000476597 NDUFA12Q9UI09 145 aa6.28□□□□□ -1.4
SEC13-214ENST00000476597 MYMXA0A1B0GTQ4 84 aa6.27□□□□□ -1.41
SEC13-214ENST00000476597 LEPROTL1O95214 131 aa6.27□□□□□ -1.41
SEC13-214ENST00000476597 BOD1L2Q8IYS8 172 aa6.27□□□□□ -1.41
SEC13-214ENST00000476597 LINC00304Q8N9R0 145 aa6.27□□□□□ -1.41
SEC13-214ENST00000476597 H0Y8G0 127 aa6.26□□□□□ -1.41
SEC13-214ENST00000476597 SERF1AO75920 110 aa6.26□□□□□ -1.41
SEC13-214ENST00000476597 CTAG1AP78358 180 aa6.26□□□□□ -1.41
SEC13-214ENST00000476597 HIGD2AQ9BW72 106 aa6.26□□□□□ -1.41
SEC13-214ENST00000476597 KCNQ1DNQ9H478 68 aa6.26□□□□□ -1.41
SEC13-214ENST00000476597 LOC107984156A0A0G2JMH3 177 aa6.25□□□□□ -1.41
SEC13-214ENST00000476597 COLCA2A8K830 154 aa6.25□□□□□ -1.41
SEC13-214ENST00000476597 PRYO14603 147 aa6.25□□□□□ -1.41
SEC13-214ENST00000476597 LEPROTO15243 131 aa6.25□□□□□ -1.41
SEC13-214ENST00000476597 SPRR1AP35321 89 aa6.25□□□□□ -1.41
SEC13-214ENST00000476597 ARL17AQ8IVW1 177 aa6.25□□□□□ -1.41
SEC13-214ENST00000476597 SLC7A5P1Q8MH63 180 aa6.25□□□□□ -1.41
SEC13-214ENST00000476597 SPRR4Q96PI1 79 aa6.25□□□□□ -1.41
SEC13-214ENST00000476597 MAP1LC3CQ9BXW4 147 aa6.25□□□□□ -1.41
SEC13-214ENST00000476597 MUC17Q685J3 4493 aa6.24□□□□□ -1.41
SEC13-214ENST00000476597 KRTAP4-16G5E9R7 235 aaPredicted RBP6.24□□□□□ -1.41
SEC13-214ENST00000476597 NCR3O14931 201 aa6.24□□□□□ -1.41
SEC13-214ENST00000476597 PLNP26678 52 aa6.24□□□□□ -1.41
SEC13-214ENST00000476597 TSPEAR-AS2P59090 65 aa6.24□□□□□ -1.41
SEC13-214ENST00000476597 C3orf22Q8N5N4 141 aa6.24□□□□□ -1.41
SEC13-214ENST00000476597 LINC00337Q8N6G1 96 aa6.24□□□□□ -1.41
SEC13-214ENST00000476597 HSPB8Q9UJY1 196 aa6.24□□□□□ -1.41
SEC13-214ENST00000476597 DPM2O94777 84 aa6.23□□□□□ -1.41
SEC13-214ENST00000476597 FABP4P15090 132 aa6.23□□□□□ -1.41
SEC13-214ENST00000476597 TRBV10-3A0A0K0K1G6 114 aa6.22□□□□□ -1.41
SEC13-214ENST00000476597 J3QQQ9 107 aa6.22□□□□□ -1.41
SEC13-214ENST00000476597 SMCR5Q8TEV8 140 aa6.22□□□□□ -1.41
SEC13-214ENST00000476597 RETNLBQ9BQ08 111 aa6.22□□□□□ -1.41
SEC13-214ENST00000476597 ZNF706Q9Y5V0 76 aaPredicted RBP6.22□□□□□ -1.41
SEC13-214ENST00000476597 IGKCP01834 107 aa6.21□□□□□ -1.42
SEC13-214ENST00000476597 NMUP48645 174 aa6.21□□□□□ -1.42
SEC13-214ENST00000476597 HERVK_113P61574 105 aa6.21□□□□□ -1.42
SEC13-214ENST00000476597 SPAG11AQ6PDA7 123 aa6.21□□□□□ -1.42
SEC13-214ENST00000476597 DAND5Q8N907 189 aa6.21□□□□□ -1.42
SEC13-214ENST00000476597 PMCHL2Q9BQD1 86 aa6.21□□□□□ -1.42
SEC13-214ENST00000476597 TRBV10-2A0A0K0K1G8 114 aa6.2□□□□□ -1.42
SEC13-214ENST00000476597 ETDCA0A1B0GVM5 59 aa6.2□□□□□ -1.42
SEC13-214ENST00000476597 FAT4Q6V0I7 4981 aa6.19□□□□□ -1.42
SEC13-214ENST00000476597 B5MCH6 92 aa6.19□□□□□ -1.42
SEC13-214ENST00000476597 LGALS3P17931 250 aaKnown RBP6.19□□□□□ -1.42
SEC13-214ENST00000476597 DDTP30046 118 aa6.19□□□□□ -1.42
SEC13-214ENST00000476597 S100A12P80511 92 aa6.19□□□□□ -1.42
SEC13-214ENST00000476597 IGLV7-46A0A075B6I9 117 aa6.18□□□□□ -1.42
SEC13-214ENST00000476597 NDUFC2O95298 119 aa6.18□□□□□ -1.42
SEC13-214ENST00000476597 TPRXLQ17RH7 258 aa6.18□□□□□ -1.42
SEC13-214ENST00000476597 PPDPFQ9H3Y8 114 aa6.18□□□□□ -1.42
SEC13-214ENST00000476597 LINC00483Q53H64 154 aa6.17□□□□□ -1.42
SEC13-214ENST00000476597 C4orf48Q5BLP8 95 aa6.17□□□□□ -1.42
SEC13-214ENST00000476597 SPANXB1Q9NS25 103 aaPredicted RBP6.17□□□□□ -1.42
SEC13-214ENST00000476597 A0A0J9YXY3 114 aa6.16□□□□□ -1.42
SEC13-214ENST00000476597 E9PLD3 99 aa6.16□□□□□ -1.42
SEC13-214ENST00000476597 ERC2-IT1O76042 136 aa6.16□□□□□ -1.42
SEC13-214ENST00000476597 IGLV6-57P01721 117 aa6.16□□□□□ -1.42
SEC13-214ENST00000476597 ADAMTSL4-AS1Q5T5F5 129 aa6.16□□□□□ -1.42
SEC13-214ENST00000476597 Q8NBF4 154 aa6.16□□□□□ -1.42
SEC13-214ENST00000476597 MIEN1Q9BRT3 115 aa6.16□□□□□ -1.42
SEC13-214ENST00000476597 EIF4EBP3O60516 100 aaPredicted RBP6.15□□□□□ -1.42
SEC13-214ENST00000476597 HIST1H2BKO60814 126 aa6.15□□□□□ -1.42
SEC13-214ENST00000476597 HIST1H2BJP06899 126 aa6.15□□□□□ -1.42
SEC13-214ENST00000476597 HIST1H2BOP23527 126 aa6.15□□□□□ -1.42
SEC13-214ENST00000476597 HIST1H2BBP33778 126 aa6.15□□□□□ -1.42
SEC13-214ENST00000476597 HIST1H2BDP58876 126 aa6.15□□□□□ -1.42
SEC13-214ENST00000476597 HIST1H2BCP62807 126 aa6.15□□□□□ -1.42
SEC13-214ENST00000476597 HIST2H2BEQ16778 126 aa6.15□□□□□ -1.42
SEC13-214ENST00000476597 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.15□□□□□ -1.42
SEC13-214ENST00000476597 S100A7L2Q5SY68 101 aa6.15□□□□□ -1.42
SEC13-214ENST00000476597 GAGE2AQ6NT46 116 aa6.15□□□□□ -1.42
SEC13-214ENST00000476597 SOSTDC1Q6X4U4 206 aa6.15□□□□□ -1.42
SEC13-214ENST00000476597 HIST1H2BHQ93079 126 aa6.15□□□□□ -1.42
SEC13-214ENST00000476597 HIST1H2BNQ99877 126 aa6.15□□□□□ -1.42
SEC13-214ENST00000476597 HIST1H2BMQ99879 126 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms