RNA–Protein interactions for RNA: ENST00000475819.1

LMNB2-202, Transcript of lamin B2, humanhuman

TSL 5

Gene LMNB2, Length 885 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-202ENST00000475819 Q6ZVH6 145 aa10.89□□□□□ -0.67
LMNB2-202ENST00000475819 SPANXB1Q9NS25 103 aaPredicted RBP10.89□□□□□ -0.67
LMNB2-202ENST00000475819 SLPIP03973 132 aa10.88□□□□□ -0.67
LMNB2-202ENST00000475819 SMIM13P0DJ93 91 aa10.88□□□□□ -0.67
LMNB2-202ENST00000475819 PFN2P35080 140 aa10.88□□□□□ -0.67
LMNB2-202ENST00000475819 LINC00158P58513 81 aa10.88□□□□□ -0.67
LMNB2-202ENST00000475819 SPANXDQ9BXN6 97 aa10.88□□□□□ -0.67
LMNB2-202ENST00000475819 SPANXCQ9NY87 97 aa10.88□□□□□ -0.67
LMNB2-202ENST00000475819 COPS9Q8WXC6 57 aa10.87□□□□□ -0.67
LMNB2-202ENST00000475819 KRTAP29-1A8MX34 341 aaPredicted RBP10.86□□□□□ -0.67
LMNB2-202ENST00000475819 TLX1NBP0CAT3 122 aa10.86□□□□□ -0.67
LMNB2-202ENST00000475819 SRSF9Q13242 221 aaKnown RBP eCLIP10.86□□□□□ -0.67
LMNB2-202ENST00000475819 TAL2Q16559 108 aa10.86□□□□□ -0.67
LMNB2-202ENST00000475819 LINC01620Q4KN68 170 aa10.86□□□□□ -0.67
LMNB2-202ENST00000475819 C9orf116Q5BN46 136 aaPredicted RBP10.86□□□□□ -0.67
LMNB2-202ENST00000475819 LITAFQ99732 161 aa10.86□□□□□ -0.67
LMNB2-202ENST00000475819 A0A0U1RRA0 63 aa10.85□□□□□ -0.67
LMNB2-202ENST00000475819 NDUFC2-KCTD14E9PQ53 114 aa10.85□□□□□ -0.67
LMNB2-202ENST00000475819 DDTP30046 118 aa10.85□□□□□ -0.67
LMNB2-202ENST00000475819 Q6ZSA8 131 aa10.85□□□□□ -0.67
LMNB2-202ENST00000475819 SCXQ7RTU7 201 aa10.85□□□□□ -0.67
LMNB2-202ENST00000475819 LOC107984640A0A0U1RRK4 108 aa10.84□□□□□ -0.67
LMNB2-202ENST00000475819 MIR7-3HGQ8N6C7 128 aa10.84□□□□□ -0.67
LMNB2-202ENST00000475819 C9orf163Q8N9P6 203 aa10.84□□□□□ -0.67
LMNB2-202ENST00000475819 HIST1H4GQ99525 98 aa10.84□□□□□ -0.67
LMNB2-202ENST00000475819 IFITM1P13164 125 aa10.83□□□□□ -0.68
LMNB2-202ENST00000475819 HSD52Q0P140 79 aa10.83□□□□□ -0.68
LMNB2-202ENST00000475819 RPL18AQ02543 176 aaKnown RBP10.82□□□□□ -0.68
LMNB2-202ENST00000475819 ADAMTSL4-AS1Q5T5F5 129 aa10.82□□□□□ -0.68
LMNB2-202ENST00000475819 SERTAD4-AS1Q5TG53 156 aa10.82□□□□□ -0.68
LMNB2-202ENST00000475819 PPDPFQ9H3Y8 114 aa10.82□□□□□ -0.68
LMNB2-202ENST00000475819 PTTG1IPP53801 180 aa10.81□□□□□ -0.68
LMNB2-202ENST00000475819 DAND5Q8N907 189 aa10.81□□□□□ -0.68
LMNB2-202ENST00000475819 Q6ZRP5 223 aa10.79□□□□□ -0.68
LMNB2-202ENST00000475819 LINC00308Q8TCZ7 52 aa10.79□□□□□ -0.68
LMNB2-202ENST00000475819 SND1-IT1Q9HBX3 110 aa10.79□□□□□ -0.68
LMNB2-202ENST00000475819 DNAH8Q96JB1 4490 aa10.79□□□□□ -0.68
LMNB2-202ENST00000475819 CTAG1AP78358 180 aa10.78□□□□□ -0.68
LMNB2-202ENST00000475819 RPL24P83731 157 aaKnown RBP10.78□□□□□ -0.68
LMNB2-202ENST00000475819 CEND1Q8N111 149 aa10.78□□□□□ -0.68
LMNB2-202ENST00000475819 LOC107984156A0A0G2JMH3 177 aa10.77□□□□□ -0.69
LMNB2-202ENST00000475819 PCP4L1A6NKN8 68 aa10.77□□□□□ -0.69
LMNB2-202ENST00000475819 M0R143 59 aa10.77□□□□□ -0.69
LMNB2-202ENST00000475819 NPC2P61916 151 aa10.77□□□□□ -0.69
LMNB2-202ENST00000475819 GAGE2EQ4V326 116 aa10.77□□□□□ -0.69
LMNB2-202ENST00000475819 ARL17AQ8IVW1 177 aa10.77□□□□□ -0.69
LMNB2-202ENST00000475819 GAGE2DQ9UEU5 116 aa10.77□□□□□ -0.69
LMNB2-202ENST00000475819 PLA2G2DQ9UNK4 145 aa10.77□□□□□ -0.69
LMNB2-202ENST00000475819 TMEM238LA0A1B0GVL6 79 aa10.76□□□□□ -0.69
LMNB2-202ENST00000475819 A6NJY4 79 aa10.76□□□□□ -0.69
LMNB2-202ENST00000475819 MUSTN1Q8IVN3 82 aa10.76□□□□□ -0.69
LMNB2-202ENST00000475819 GAGE2BQ13066 116 aa10.75□□□□□ -0.69
LMNB2-202ENST00000475819 CIRBP-AS1Q8TBR5 109 aa10.75□□□□□ -0.69
LMNB2-202ENST00000475819 LINC00474Q9P2X8 69 aa10.75□□□□□ -0.69
LMNB2-202ENST00000475819 SOSTDC1Q6X4U4 206 aa10.74□□□□□ -0.69
LMNB2-202ENST00000475819 XAGE1AQ9HD64 81 aa10.74□□□□□ -0.69
LMNB2-202ENST00000475819 A0A096LNI7 61 aa10.73□□□□□ -0.69
LMNB2-202ENST00000475819 OXTP01178 125 aa10.73□□□□□ -0.69
LMNB2-202ENST00000475819 SDIM1Q6ZPB5 146 aa10.73□□□□□ -0.69
LMNB2-202ENST00000475819 NDUFC2O95298 119 aa10.72□□□□□ -0.69
LMNB2-202ENST00000475819 HMCN2Q8NDA2 5059 aa10.71□□□□□ -0.69
LMNB2-202ENST00000475819 HINT1P49773 126 aaPredicted RBP10.71□□□□□ -0.69
LMNB2-202ENST00000475819 RPL37AP61513 92 aaKnown RBP10.71□□□□□ -0.69
LMNB2-202ENST00000475819 C9orf129Q5T035 196 aaKnown RBP10.71□□□□□ -0.69
LMNB2-202ENST00000475819 BVES-AS1Q5T3Y7 98 aa10.71□□□□□ -0.69
LMNB2-202ENST00000475819 IGKV2-24A0A0C4DH68 120 aa10.7□□□□□ -0.7
LMNB2-202ENST00000475819 A4D1N5 150 aa10.7□□□□□ -0.7
LMNB2-202ENST00000475819 FXYD2P54710 66 aa10.7□□□□□ -0.7
LMNB2-202ENST00000475819 LRP1Q07954 4544 aaKnown RBP10.7□□□□□ -0.7
LMNB2-202ENST00000475819 EIF4EBP3O60516 100 aaPredicted RBP10.69□□□□□ -0.7
LMNB2-202ENST00000475819 A6NDN8 102 aa10.67□□□□□ -0.7
LMNB2-202ENST00000475819 KRTAP10-4P60372 401 aaPredicted RBP10.67□□□□□ -0.7
LMNB2-202ENST00000475819 A0A0B4J2C4 111 aa10.66□□□□□ -0.7
LMNB2-202ENST00000475819 TRBV10-2A0A0K0K1G8 114 aa10.66□□□□□ -0.7
LMNB2-202ENST00000475819 VPREB1P12018 145 aa10.66□□□□□ -0.7
LMNB2-202ENST00000475819 NKAPP1Q8N9T2 125 aa10.66□□□□□ -0.7
LMNB2-202ENST00000475819 SPACA4Q8TDM5 124 aa10.66□□□□□ -0.7
LMNB2-202ENST00000475819 NHP2Q9NX24 153 aaKnown RBP10.66□□□□□ -0.7
LMNB2-202ENST00000475819 IGLV5-37A0A075B6J1 123 aa10.65□□□□□ -0.7
LMNB2-202ENST00000475819 CHTF8P0CG12 524 aa10.65□□□□□ -0.7
LMNB2-202ENST00000475819 BATFQ16520 125 aa10.65□□□□□ -0.7
LMNB2-202ENST00000475819 TRAV13-2A0A0B4J235 113 aa10.64□□□□□ -0.71
LMNB2-202ENST00000475819 RAB37Q96AX2 223 aa10.64□□□□□ -0.71
LMNB2-202ENST00000475819 FAT3Q8TDW7 4589 aa10.63□□□□□ -0.71
LMNB2-202ENST00000475819 A0A1B0GWB2 263 aa10.63□□□□□ -0.71
LMNB2-202ENST00000475819 CFC1BP0CG36 223 aa10.63□□□□□ -0.71
LMNB2-202ENST00000475819 CFC1P0CG37 223 aa10.63□□□□□ -0.71
LMNB2-202ENST00000475819 FAM19A5Q7Z5A7 132 aaPredicted RBP10.63□□□□□ -0.71
LMNB2-202ENST00000475819 M0R378 163 aa10.62□□□□□ -0.71
LMNB2-202ENST00000475819 NCR3O14931 201 aa10.62□□□□□ -0.71
LMNB2-202ENST00000475819 Q8NDZ9 215 aa10.62□□□□□ -0.71
LMNB2-202ENST00000475819 DPH3Q96FX2 82 aa10.62□□□□□ -0.71
LMNB2-202ENST00000475819 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.62□□□□□ -0.71
LMNB2-202ENST00000475819 IGKV2-28A0A075B6P5 120 aa10.61□□□□□ -0.71
LMNB2-202ENST00000475819 FAM168BA1KXE4 195 aa10.61□□□□□ -0.71
LMNB2-202ENST00000475819 IGKV2D-28P01615 120 aa10.61□□□□□ -0.71
LMNB2-202ENST00000475819 SNHG12Q9BXW3 62 aa10.61□□□□□ -0.71
LMNB2-202ENST00000475819 M0QXV9 152 aa10.6□□□□□ -0.71
LMNB2-202ENST00000475819 S100A7L2Q5SY68 101 aa10.6□□□□□ -0.71
LMNB2-202ENST00000475819 CBY1Q9Y3M2 126 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms