RNA–Protein interactions for RNA: ENST00000475622.5

LPCAT1-202, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 5

Gene LPCAT1, Length 5,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-202ENST00000475622 CEP295Q9C0D2 2601 aa12.29□□□□□ -0.44
LPCAT1-202ENST00000475622 FAM218AQ96MZ4 157 aa12.28□□□□□ -0.44
LPCAT1-202ENST00000475622 C6orf48Q9UBA6 75 aa12.28□□□□□ -0.44
LPCAT1-202ENST00000475622 CPAMD8Q8IZJ3 1885 aa12.28□□□□□ -0.44
LPCAT1-202ENST00000475622 FAM19A4Q96LR4 140 aa12.26□□□□□ -0.45
LPCAT1-202ENST00000475622 C7orf65Q6ZTY9 151 aa12.26□□□□□ -0.45
LPCAT1-202ENST00000475622 SRCAPQ6ZRS2 3230 aa12.25□□□□□ -0.45
LPCAT1-202ENST00000475622 IGLV5-45A0A087WSX0 123 aa12.24□□□□□ -0.45
LPCAT1-202ENST00000475622 A0A1B0GU69 56 aa12.24□□□□□ -0.45
LPCAT1-202ENST00000475622 PRO0628Q9UI54 55 aa12.24□□□□□ -0.45
LPCAT1-202ENST00000475622 MOBPQ13875 183 aa12.24□□□□□ -0.45
LPCAT1-202ENST00000475622 ANKRD11Q6UB99 2663 aaPredicted RBP12.24□□□□□ -0.45
LPCAT1-202ENST00000475622 PRO0461Q9UI25 63 aa12.24□□□□□ -0.45
LPCAT1-202ENST00000475622 SPACA4Q8TDM5 124 aa12.23□□□□□ -0.45
LPCAT1-202ENST00000475622 TP53AIP1Q9HCN2 124 aa12.23□□□□□ -0.45
LPCAT1-202ENST00000475622 ADAMTS20P59510 1910 aa12.22□□□□□ -0.45
LPCAT1-202ENST00000475622 CHD8Q9HCK8 2581 aa12.21□□□□□ -0.46
LPCAT1-202ENST00000475622 ELOF1P60002 83 aaKnown RBP12.21□□□□□ -0.46
LPCAT1-202ENST00000475622 MTORP42345 2549 aa12.2□□□□□ -0.46
LPCAT1-202ENST00000475622 BCE1O60756 84 aa12.2□□□□□ -0.46
LPCAT1-202ENST00000475622 MDFIQ99750 246 aa12.19□□□□□ -0.46
LPCAT1-202ENST00000475622 ACYP2P14621 99 aa12.19□□□□□ -0.46
LPCAT1-202ENST00000475622 NHLRC4P0CG21 123 aaPredicted RBP12.19□□□□□ -0.46
LPCAT1-202ENST00000475622 Q6ZQT0 140 aa12.18□□□□□ -0.46
LPCAT1-202ENST00000475622 SPAG11AQ6PDA7 123 aa12.17□□□□□ -0.46
LPCAT1-202ENST00000475622 C4orf26Q17RF5 130 aa12.16□□□□□ -0.46
LPCAT1-202ENST00000475622 Q8NBF4 154 aa12.16□□□□□ -0.46
LPCAT1-202ENST00000475622 LINC00476Q8WZB0 136 aa12.16□□□□□ -0.46
LPCAT1-202ENST00000475622 A0A1B0GW54 56 aa12.15□□□□□ -0.46
LPCAT1-202ENST00000475622 COL5A1P20908 1838 aaPredicted RBP12.15□□□□□ -0.46
LPCAT1-202ENST00000475622 Q6ZRX8 168 aa12.14□□□□□ -0.47
LPCAT1-202ENST00000475622 LOC110117498A0A087WWA1 95 aa12.13□□□□□ -0.47
LPCAT1-202ENST00000475622 PHF5AQ7RTV0 110 aaKnown RBP12.13□□□□□ -0.47
LPCAT1-202ENST00000475622 RPS28P62857 69 aaKnown RBP12.11□□□□□ -0.47
LPCAT1-202ENST00000475622 TM2D3Q9BRN9 247 aa12.11□□□□□ -0.47
LPCAT1-202ENST00000475622 ST20-AS1Q8NBB2 130 aa12.11□□□□□ -0.47
LPCAT1-202ENST00000475622 H3BNG1 76 aa12.1□□□□□ -0.47
LPCAT1-202ENST00000475622 SPTBN4Q9H254 2564 aa12.1□□□□□ -0.47
LPCAT1-202ENST00000475622 TRAV22A0A0B4J277 110 aa12.09□□□□□ -0.47
LPCAT1-202ENST00000475622 H3BPC8 53 aa12.09□□□□□ -0.47
LPCAT1-202ENST00000475622 EPM2AB3EWF7 344 aa12.08□□□□□ -0.48
LPCAT1-202ENST00000475622 RPL37AP61513 92 aaKnown RBP12.07□□□□□ -0.48
LPCAT1-202ENST00000475622 ATP11AUNQ6ZP68 121 aa12.06□□□□□ -0.48
LPCAT1-202ENST00000475622 LINC00313P59037 77 aa12.05□□□□□ -0.48
LPCAT1-202ENST00000475622 CHTF8P0CG12 524 aa12.04□□□□□ -0.48
LPCAT1-202ENST00000475622 IGLV8-61A0A075B6I0 122 aa12.03□□□□□ -0.48
LPCAT1-202ENST00000475622 C16orf90A8MZG2 172 aa12.02□□□□□ -0.49
LPCAT1-202ENST00000475622 SERTAD4-AS1Q5TG53 156 aa12.01□□□□□ -0.49
LPCAT1-202ENST00000475622 LITAFQ99732 161 aa12.01□□□□□ -0.49
LPCAT1-202ENST00000475622 RTL8CO15255 209 aa12□□□□□ -0.49
LPCAT1-202ENST00000475622 POLQO75417 2590 aa12□□□□□ -0.49
LPCAT1-202ENST00000475622 TRBV7-4A0A0J9YYF1 115 aa11.98□□□□□ -0.49
LPCAT1-202ENST00000475622 Q8NAQ8 132 aa11.98□□□□□ -0.49
LPCAT1-202ENST00000475622 LINC00588Q9Y4M8 146 aa11.98□□□□□ -0.49
LPCAT1-202ENST00000475622 GVQW2A0A096LPI5 108 aaPredicted RBP11.98□□□□□ -0.49
LPCAT1-202ENST00000475622 PTPRBP23467 1997 aa11.98□□□□□ -0.49
LPCAT1-202ENST00000475622 Q6ZRP5 223 aa11.98□□□□□ -0.49
LPCAT1-202ENST00000475622 TYMSOSQ8TAI1 123 aa11.97□□□□□ -0.49
LPCAT1-202ENST00000475622 NBDYA0A0U1RRE5 68 aa11.97□□□□□ -0.49
LPCAT1-202ENST00000475622 FASNP49327 2511 aaKnown RBP11.96□□□□□ -0.49
LPCAT1-202ENST00000475622 CENPFP49454 3210 aa11.96□□□□□ -0.49
LPCAT1-202ENST00000475622 ACANP16112 2415 aa11.96□□□□□ -0.49
LPCAT1-202ENST00000475622 VPREB1P12018 145 aa11.95□□□□□ -0.5
LPCAT1-202ENST00000475622 C8orf87E5RJ46 101 aa11.94□□□□□ -0.5
LPCAT1-202ENST00000475622 IGLV6-57P01721 117 aa11.94□□□□□ -0.5
LPCAT1-202ENST00000475622 K7EQZ3 153 aa11.92□□□□□ -0.5
LPCAT1-202ENST00000475622 Q96NJ1 140 aa11.92□□□□□ -0.5
LPCAT1-202ENST00000475622 LOC101927531A0A1B0GV80 90 aa11.92□□□□□ -0.5
LPCAT1-202ENST00000475622 FAM168BA1KXE4 195 aa11.92□□□□□ -0.5
LPCAT1-202ENST00000475622 KRTAP24-1Q3LI83 254 aa11.92□□□□□ -0.5
LPCAT1-202ENST00000475622 A8MWP4 228 aa11.91□□□□□ -0.5
LPCAT1-202ENST00000475622 PLA2G1BP04054 148 aaKnown RBP11.89□□□□□ -0.51
LPCAT1-202ENST00000475622 FAM229AH3BQW9 127 aa11.88□□□□□ -0.51
LPCAT1-202ENST00000475622 A8MUN3 132 aa11.87□□□□□ -0.51
LPCAT1-202ENST00000475622 MRPL34Q9BQ48 92 aaKnown RBP11.87□□□□□ -0.51
LPCAT1-202ENST00000475622 LINC01600Q96MT4 127 aa11.86□□□□□ -0.51
LPCAT1-202ENST00000475622 COA5Q86WW8 74 aa11.86□□□□□ -0.51
LPCAT1-202ENST00000475622 ANKRD17O75179 2603 aaKnown RBP11.86□□□□□ -0.51
LPCAT1-202ENST00000475622 DNAH10OSP0CZ25 163 aa11.85□□□□□ -0.51
LPCAT1-202ENST00000475622 COL27A1Q8IZC6 1860 aaPredicted RBP11.85□□□□□ -0.51
LPCAT1-202ENST00000475622 SPINT4Q6UDR6 99 aa11.85□□□□□ -0.51
LPCAT1-202ENST00000475622 ERC2-IT1O76042 136 aa11.84□□□□□ -0.51
LPCAT1-202ENST00000475622 KLK9Q2XQG4 91 aa11.84□□□□□ -0.51
LPCAT1-202ENST00000475622 EIF4EBP3O60516 100 aaPredicted RBP11.83□□□□□ -0.52
LPCAT1-202ENST00000475622 IGLV1-50A0A075B6I6 118 aa11.83□□□□□ -0.52
LPCAT1-202ENST00000475622 KCNQ1DNQ9H478 68 aa11.81□□□□□ -0.52
LPCAT1-202ENST00000475622 LINC00528Q8N1L1 170 aa11.81□□□□□ -0.52
LPCAT1-202ENST00000475622 SSBP3-AS1Q7Z2R9 100 aa11.78□□□□□ -0.52
LPCAT1-202ENST00000475622 IGFL1Q6UW32 110 aa11.78□□□□□ -0.52
LPCAT1-202ENST00000475622 CYP4F30PQ9H0H9 118 aa11.77□□□□□ -0.53
LPCAT1-202ENST00000475622 UQCR11O14957 56 aa11.76□□□□□ -0.53
LPCAT1-202ENST00000475622 CSNK1G2-AS1Q8NCQ2 148 aa11.75□□□□□ -0.53
LPCAT1-202ENST00000475622 COL4A2P08572 1712 aa11.75□□□□□ -0.53
LPCAT1-202ENST00000475622 PRR15Q8IV56 129 aa11.74□□□□□ -0.53
LPCAT1-202ENST00000475622 C8orf17Q9NRJ1 99 aa11.73□□□□□ -0.53
LPCAT1-202ENST00000475622 DSCR10P59022 87 aa11.73□□□□□ -0.53
LPCAT1-202ENST00000475622 KLKP1Q107X0 134 aa11.71□□□□□ -0.54
LPCAT1-202ENST00000475622 Q8N377 158 aa11.7□□□□□ -0.54
LPCAT1-202ENST00000475622 C15orf56Q8N910 161 aa11.69□□□□□ -0.54
LPCAT1-202ENST00000475622 PRR34Q9NV39 138 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 169 ms