RNA–Protein interactions for RNA: ENST00000474851.1

LSAMP-203, Transcript of limbic system associated membrane protein, humanhuman

TSL 5

Gene LSAMP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-203ENST00000474851 TMEM170BQ5T4T1 132 aa4.71□□□□□ -1.66
LSAMP-203ENST00000474851 KRTAP26-1Q6PEX3 210 aa4.71□□□□□ -1.66
LSAMP-203ENST00000474851 CHCHD5Q9BSY4 110 aa4.71□□□□□ -1.66
LSAMP-203ENST00000474851 SMIM2Q9BVW6 85 aa4.71□□□□□ -1.66
LSAMP-203ENST00000474851 DPH3P1Q9H4G8 78 aa4.71□□□□□ -1.66
LSAMP-203ENST00000474851 PRR34Q9NV39 138 aa4.71□□□□□ -1.66
LSAMP-203ENST00000474851 IGLV4-69A0A075B6H9 119 aa4.7□□□□□ -1.66
LSAMP-203ENST00000474851 TRAV26-2A0A0B4J265 109 aa4.7□□□□□ -1.66
LSAMP-203ENST00000474851 C9JAW5 83 aa4.7□□□□□ -1.66
LSAMP-203ENST00000474851 CXCL5P42830 114 aa4.7□□□□□ -1.66
LSAMP-203ENST00000474851 HIST1H4AP62805 103 aaKnown RBP4.7□□□□□ -1.66
LSAMP-203ENST00000474851 ATXN8Q156A1 80 aa4.7□□□□□ -1.66
LSAMP-203ENST00000474851 DEFB104AQ8WTQ1 72 aa4.7□□□□□ -1.66
LSAMP-203ENST00000474851 RMI2Q96E14 147 aa4.7□□□□□ -1.66
LSAMP-203ENST00000474851 TMEM101Q96IK0 257 aa4.7□□□□□ -1.66
LSAMP-203ENST00000474851 IGLV4-60A0A075B6I1 120 aa4.69□□□□□ -1.66
LSAMP-203ENST00000474851 A0A1B0GUV1 79 aa4.69□□□□□ -1.66
LSAMP-203ENST00000474851 C11orf86A6NJI1 115 aa4.69□□□□□ -1.66
LSAMP-203ENST00000474851 SMR3BP02814 79 aaPredicted RBP4.69□□□□□ -1.66
LSAMP-203ENST00000474851 ANGP03950 147 aaKnown RBP4.69□□□□□ -1.66
LSAMP-203ENST00000474851 HAMPP81172 84 aa4.69□□□□□ -1.66
LSAMP-203ENST00000474851 SRSF9Q13242 221 aaKnown RBP eCLIP4.69□□□□□ -1.66
LSAMP-203ENST00000474851 Q6ZSA8 131 aa4.69□□□□□ -1.66
LSAMP-203ENST00000474851 FAM19A5Q7Z5A7 132 aaPredicted RBP4.69□□□□□ -1.66
LSAMP-203ENST00000474851 C5orf38Q86SI9 138 aa4.69□□□□□ -1.66
LSAMP-203ENST00000474851 LINC00269Q8N2A0 174 aa4.69□□□□□ -1.66
LSAMP-203ENST00000474851 C20orf203Q8NBC4 194 aa4.69□□□□□ -1.66
LSAMP-203ENST00000474851 RPL39LQ96EH5 51 aaKnown RBP4.69□□□□□ -1.66
LSAMP-203ENST00000474851 C2orf48Q96LS8 159 aa4.69□□□□□ -1.66
LSAMP-203ENST00000474851 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.68□□□□□ -1.66
LSAMP-203ENST00000474851 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.68□□□□□ -1.66
LSAMP-203ENST00000474851 TEX49A0A1B0GTD5 131 aa4.68□□□□□ -1.66
LSAMP-203ENST00000474851 EPM2AB3EWF7 344 aa4.68□□□□□ -1.66
LSAMP-203ENST00000474851 HERVK_113P63121 156 aa4.68□□□□□ -1.66
LSAMP-203ENST00000474851 MIAQ16674 131 aa4.68□□□□□ -1.66
LSAMP-203ENST00000474851 OR13C6PQ8NH95 151 aa4.68□□□□□ -1.66
LSAMP-203ENST00000474851 SCGB3A1Q96QR1 104 aa4.68□□□□□ -1.66
LSAMP-203ENST00000474851 TMEM243Q9BU79 118 aa4.68□□□□□ -1.66
LSAMP-203ENST00000474851 C1orf43Q9BWL3 253 aa4.68□□□□□ -1.66
LSAMP-203ENST00000474851 HERC1Q15751 4861 aa4.68□□□□□ -1.66
LSAMP-203ENST00000474851 MYCBP2O75592 4640 aa4.68□□□□□ -1.66
LSAMP-203ENST00000474851 TRBV6-5A0A0K0K1A5 114 aa4.67□□□□□ -1.66
LSAMP-203ENST00000474851 TMEM223A0PJW6 202 aa4.67□□□□□ -1.66
LSAMP-203ENST00000474851 A4D1N5 150 aa4.67□□□□□ -1.66
LSAMP-203ENST00000474851 SDHAF1A6NFY7 115 aa4.67□□□□□ -1.66
LSAMP-203ENST00000474851 IGIPA6NJ69 53 aa4.67□□□□□ -1.66
LSAMP-203ENST00000474851 H7C423 109 aa4.67□□□□□ -1.66
LSAMP-203ENST00000474851 COX7CP15954 63 aa4.67□□□□□ -1.66
LSAMP-203ENST00000474851 HERVK_113P61574 105 aa4.67□□□□□ -1.66
LSAMP-203ENST00000474851 REG3AQ06141 175 aa4.67□□□□□ -1.66
LSAMP-203ENST00000474851 CLPSL2Q6UWE3 100 aa4.67□□□□□ -1.66
LSAMP-203ENST00000474851 SCGB1D4Q6XE38 83 aa4.67□□□□□ -1.66
LSAMP-203ENST00000474851 LINC00643Q86TS7 51 aa4.67□□□□□ -1.66
LSAMP-203ENST00000474851 USP17L23D6RBM5 183 aa4.66□□□□□ -1.66
LSAMP-203ENST00000474851 TSHBP01222 138 aa4.66□□□□□ -1.66
LSAMP-203ENST00000474851 CRPP02741 224 aa4.66□□□□□ -1.66
LSAMP-203ENST00000474851 POLR2KP53803 58 aaKnown RBP4.66□□□□□ -1.66
LSAMP-203ENST00000474851 TSPEAR-AS2P59090 65 aa4.66□□□□□ -1.66
LSAMP-203ENST00000474851 SUMO2P61956 95 aaKnown RBP4.66□□□□□ -1.66
LSAMP-203ENST00000474851 C9orf153Q5TBE3 101 aa4.66□□□□□ -1.66
LSAMP-203ENST00000474851 Q5VSD8 79 aa4.66□□□□□ -1.66
LSAMP-203ENST00000474851 C2orf66Q6UXQ4 117 aa4.66□□□□□ -1.66
LSAMP-203ENST00000474851 TMEM141Q96I45 108 aa4.66□□□□□ -1.66
LSAMP-203ENST00000474851 TIMM17AQ99595 171 aa4.66□□□□□ -1.66
LSAMP-203ENST00000474851 VPS13BQ7Z7G8 4022 aa4.66□□□□□ -1.66
LSAMP-203ENST00000474851 IGLV10-54A0A075B6I4 117 aa4.65□□□□□ -1.67
LSAMP-203ENST00000474851 LOC107984640A0A0U1RRK4 108 aa4.65□□□□□ -1.67
LSAMP-203ENST00000474851 LST1O00453 97 aa4.65□□□□□ -1.67
LSAMP-203ENST00000474851 LEPROTO15243 131 aa4.65□□□□□ -1.67
LSAMP-203ENST00000474851 PPP1R17O96001 155 aa4.65□□□□□ -1.67
LSAMP-203ENST00000474851 SLPIP03973 132 aa4.65□□□□□ -1.67
LSAMP-203ENST00000474851 TMEM258P61165 79 aa4.65□□□□□ -1.67
LSAMP-203ENST00000474851 PMVKQ15126 192 aa4.65□□□□□ -1.67
LSAMP-203ENST00000474851 LCE4AQ5TA78 99 aa4.65□□□□□ -1.67
LSAMP-203ENST00000474851 SRRM2Q9UQ35 2752 aaKnown RBP4.64□□□□□ -1.67
LSAMP-203ENST00000474851 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.64□□□□□ -1.67
LSAMP-203ENST00000474851 FAM236AA0A1B0GUQ0 79 aa4.64□□□□□ -1.67
LSAMP-203ENST00000474851 FAM236BA0A1B0GV22 79 aa4.64□□□□□ -1.67
LSAMP-203ENST00000474851 IGKV2-29A2NJV5 120 aaPredicted RBP4.64□□□□□ -1.67
LSAMP-203ENST00000474851 I3L3M4 83 aa4.64□□□□□ -1.67
LSAMP-203ENST00000474851 J3QQQ9 107 aa4.64□□□□□ -1.67
LSAMP-203ENST00000474851 TRIAP1O43715 76 aa4.64□□□□□ -1.67
LSAMP-203ENST00000474851 INAFM2P0DMQ5 153 aa4.64□□□□□ -1.67
LSAMP-203ENST00000474851 MALP21145 153 aa4.64□□□□□ -1.67
LSAMP-203ENST00000474851 C14orf177Q52M58 125 aa4.64□□□□□ -1.67
LSAMP-203ENST00000474851 DGAT2L7PQ6IED9 249 aa4.64□□□□□ -1.67
LSAMP-203ENST00000474851 SFTA2Q6UW10 78 aa4.64□□□□□ -1.67
LSAMP-203ENST00000474851 C2orf82Q6UX34 121 aa4.64□□□□□ -1.67
LSAMP-203ENST00000474851 DPH3Q96FX2 82 aa4.64□□□□□ -1.67
LSAMP-203ENST00000474851 LITAFQ99732 161 aa4.64□□□□□ -1.67
LSAMP-203ENST00000474851 TRBV27A0A0K0K1C4 114 aa4.63□□□□□ -1.67
LSAMP-203ENST00000474851 UBE2L6O14933 153 aa4.63□□□□□ -1.67
LSAMP-203ENST00000474851 Q5XG85 94 aa4.63□□□□□ -1.67
LSAMP-203ENST00000474851 SCXQ7RTU7 201 aa4.63□□□□□ -1.67
LSAMP-203ENST00000474851 MUSTN1Q8IVN3 82 aa4.63□□□□□ -1.67
LSAMP-203ENST00000474851 DAND5Q8N907 189 aa4.63□□□□□ -1.67
LSAMP-203ENST00000474851 C9orf163Q8N9P6 203 aa4.63□□□□□ -1.67
LSAMP-203ENST00000474851 CIRBP-AS1Q8TBR5 109 aa4.63□□□□□ -1.67
LSAMP-203ENST00000474851 ATOX1O00244 68 aa4.62□□□□□ -1.67
LSAMP-203ENST00000474851 VCYO14598 125 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms