RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 TMEM126AQ9H061 195 aa3.84□□□□□ -1.79
HDAC1-204ENST00000471488 GEMIN7Q9H840 131 aaKnown RBP3.84□□□□□ -1.79
HDAC1-204ENST00000471488 PFN2P35080 140 aa3.83□□□□□ -1.8
HDAC1-204ENST00000471488 COL5A1-AS1Q5SY13 56 aa3.83□□□□□ -1.8
HDAC1-204ENST00000471488 MRPL54Q6P161 138 aaKnown RBP3.83□□□□□ -1.8
HDAC1-204ENST00000471488 HIST3H2BBQ8N257 126 aa3.83□□□□□ -1.8
HDAC1-204ENST00000471488 CDKN2A-AS1Q9UH64 79 aa3.83□□□□□ -1.8
HDAC1-204ENST00000471488 NAT8BQ9UHF3 227 aa3.83□□□□□ -1.8
HDAC1-204ENST00000471488 IGLV9-49A0A0B4J1Y8 123 aa3.82□□□□□ -1.8
HDAC1-204ENST00000471488 LORP23490 312 aaPredicted RBP3.82□□□□□ -1.8
HDAC1-204ENST00000471488 OCIAD2Q56VL3 154 aa3.82□□□□□ -1.8
HDAC1-204ENST00000471488 PCOTHQ58A44 107 aa3.82□□□□□ -1.8
HDAC1-204ENST00000471488 XP32Q5T750 250 aa3.82□□□□□ -1.8
HDAC1-204ENST00000471488 ALKAL2Q6UX46 152 aa3.82□□□□□ -1.8
HDAC1-204ENST00000471488 LINC01561Q8N1V8 128 aa3.82□□□□□ -1.8
HDAC1-204ENST00000471488 MTURNQ8N3F0 131 aa3.82□□□□□ -1.8
HDAC1-204ENST00000471488 TRBV24-1A0A075B6N3 115 aa3.81□□□□□ -1.8
HDAC1-204ENST00000471488 TMEM250H0YL14 139 aa3.81□□□□□ -1.8
HDAC1-204ENST00000471488 K7ERU9 68 aa3.81□□□□□ -1.8
HDAC1-204ENST00000471488 SPINK1P00995 79 aa3.81□□□□□ -1.8
HDAC1-204ENST00000471488 CXCL5P42830 114 aa3.81□□□□□ -1.8
HDAC1-204ENST00000471488 HERVK_113P63121 156 aa3.81□□□□□ -1.8
HDAC1-204ENST00000471488 PET117Q6UWS5 81 aa3.81□□□□□ -1.8
HDAC1-204ENST00000471488 COX7B2Q8TF08 81 aa3.81□□□□□ -1.8
HDAC1-204ENST00000471488 YPEL4Q96NS1 127 aa3.81□□□□□ -1.8
HDAC1-204ENST00000471488 SPRR4Q96PI1 79 aa3.81□□□□□ -1.8
HDAC1-204ENST00000471488 OSTCQ9NRP0 149 aa3.81□□□□□ -1.8
HDAC1-204ENST00000471488 CYSLTR1Q9Y271 337 aa3.81□□□□□ -1.8
HDAC1-204ENST00000471488 PYGO1Q9Y3Y4 419 aa3.81□□□□□ -1.8
HDAC1-204ENST00000471488 C9orf92A6NGG3 77 aa3.8□□□□□ -1.8
HDAC1-204ENST00000471488 M0R378 163 aa3.8□□□□□ -1.8
HDAC1-204ENST00000471488 SPINK8P0C7L1 97 aa3.8□□□□□ -1.8
HDAC1-204ENST00000471488 HERV-K104P63124 156 aa3.8□□□□□ -1.8
HDAC1-204ENST00000471488 MOBPQ13875 183 aa3.8□□□□□ -1.8
HDAC1-204ENST00000471488 ADIRFQ15847 76 aa3.8□□□□□ -1.8
HDAC1-204ENST00000471488 C2orf66Q6UXQ4 117 aa3.8□□□□□ -1.8
HDAC1-204ENST00000471488 FAM19A2Q8N3H0 131 aa3.8□□□□□ -1.8
HDAC1-204ENST00000471488 PRELID3AQ96N28 172 aa3.8□□□□□ -1.8
HDAC1-204ENST00000471488 TIMM17AQ99595 171 aa3.8□□□□□ -1.8
HDAC1-204ENST00000471488 GNB1LQ9BYB4 327 aa3.8□□□□□ -1.8
HDAC1-204ENST00000471488 CST9LQ9H4G1 147 aa3.8□□□□□ -1.8
HDAC1-204ENST00000471488 ZNF706Q9Y5V0 76 aaPredicted RBP3.8□□□□□ -1.8
HDAC1-204ENST00000471488 V9GYV3 84 aa3.8□□□□□ -1.8
HDAC1-204ENST00000471488 IGLV5-37A0A075B6J1 123 aa3.79□□□□□ -1.8
HDAC1-204ENST00000471488 A0A1B0GW15 77 aa3.79□□□□□ -1.8
HDAC1-204ENST00000471488 ATP5LO75964 103 aa3.79□□□□□ -1.8
HDAC1-204ENST00000471488 SEC11AP67812 179 aa3.79□□□□□ -1.8
HDAC1-204ENST00000471488 TMEM136Q6ZRR5 245 aa3.79□□□□□ -1.8
HDAC1-204ENST00000471488 ORMDL3Q8N138 153 aa3.79□□□□□ -1.8
HDAC1-204ENST00000471488 MAP1LC3AQ9H492 121 aa3.79□□□□□ -1.8
HDAC1-204ENST00000471488 SLC25A20O43772 301 aa3.78□□□□□ -1.8
HDAC1-204ENST00000471488 SCGB1D1O95968 90 aa3.78□□□□□ -1.8
HDAC1-204ENST00000471488 NDUFA6P56556 154 aa3.78□□□□□ -1.8
HDAC1-204ENST00000471488 RPL24P83731 157 aaKnown RBP3.78□□□□□ -1.8
HDAC1-204ENST00000471488 KRTAP19-2Q3LHN2 52 aa3.78□□□□□ -1.8
HDAC1-204ENST00000471488 COX19Q49B96 90 aa3.78□□□□□ -1.8
HDAC1-204ENST00000471488 GAGE2AQ6NT46 116 aa3.78□□□□□ -1.8
HDAC1-204ENST00000471488 Q8N377 158 aa3.78□□□□□ -1.8
HDAC1-204ENST00000471488 HIST1H2BLQ99880 126 aa3.78□□□□□ -1.8
HDAC1-204ENST00000471488 SMIM1B2RUZ4 78 aa3.77□□□□□ -1.81
HDAC1-204ENST00000471488 C5orf47Q569G3 176 aa3.77□□□□□ -1.81
HDAC1-204ENST00000471488 COA6Q5JTJ3 125 aaKnown RBP3.77□□□□□ -1.81
HDAC1-204ENST00000471488 C9orf153Q5TBE3 101 aa3.77□□□□□ -1.81
HDAC1-204ENST00000471488 Q6Q795 121 aa3.77□□□□□ -1.81
HDAC1-204ENST00000471488 ZNF625Q96I27 306 aaPredicted RBP3.77□□□□□ -1.81
HDAC1-204ENST00000471488 AMELXQ99217 191 aa3.77□□□□□ -1.81
HDAC1-204ENST00000471488 MIEN1Q9BRT3 115 aa3.77□□□□□ -1.81
HDAC1-204ENST00000471488 SMIM27A0A1W2PRY6 76 aa3.76□□□□□ -1.81
HDAC1-204ENST00000471488 VPREB1P12018 145 aa3.76□□□□□ -1.81
HDAC1-204ENST00000471488 FABP4P15090 132 aa3.76□□□□□ -1.81
HDAC1-204ENST00000471488 RHEBQ15382 184 aa3.76□□□□□ -1.81
HDAC1-204ENST00000471488 ORMDL2Q53FV1 153 aa3.76□□□□□ -1.81
HDAC1-204ENST00000471488 PDZD11Q5EBL8 140 aa3.76□□□□□ -1.81
HDAC1-204ENST00000471488 PAPPA-AS1Q5QFB9 102 aa3.76□□□□□ -1.81
HDAC1-204ENST00000471488 BOD1L2Q8IYS8 172 aa3.76□□□□□ -1.81
HDAC1-204ENST00000471488 SMCR5Q8TEV8 140 aa3.76□□□□□ -1.81
HDAC1-204ENST00000471488 SND1-IT1Q9HBX3 110 aa3.76□□□□□ -1.81
HDAC1-204ENST00000471488 A0A0U1RRA0 63 aa3.75□□□□□ -1.81
HDAC1-204ENST00000471488 ETDCA0A1B0GVM5 59 aa3.75□□□□□ -1.81
HDAC1-204ENST00000471488 HIST1H2BKO60814 126 aa3.75□□□□□ -1.81
HDAC1-204ENST00000471488 HIST1H2BJP06899 126 aa3.75□□□□□ -1.81
HDAC1-204ENST00000471488 HIST1H2BOP23527 126 aa3.75□□□□□ -1.81
HDAC1-204ENST00000471488 HIST1H2BBP33778 126 aa3.75□□□□□ -1.81
HDAC1-204ENST00000471488 HIST1H2BDP58876 126 aa3.75□□□□□ -1.81
HDAC1-204ENST00000471488 HIST1H2BCP62807 126 aa3.75□□□□□ -1.81
HDAC1-204ENST00000471488 RPL23P62829 140 aaKnown RBP3.75□□□□□ -1.81
HDAC1-204ENST00000471488 HIST2H2BEQ16778 126 aa3.75□□□□□ -1.81
HDAC1-204ENST00000471488 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.75□□□□□ -1.81
HDAC1-204ENST00000471488 HRCT1Q6UXD1 115 aa3.75□□□□□ -1.81
HDAC1-204ENST00000471488 HIST1H2BHQ93079 126 aa3.75□□□□□ -1.81
HDAC1-204ENST00000471488 ANAPC16Q96DE5 110 aa3.75□□□□□ -1.81
HDAC1-204ENST00000471488 HIST1H2BNQ99877 126 aa3.75□□□□□ -1.81
HDAC1-204ENST00000471488 HIST1H2BMQ99879 126 aa3.75□□□□□ -1.81
HDAC1-204ENST00000471488 IGIPA6NJ69 53 aa3.74□□□□□ -1.81
HDAC1-204ENST00000471488 SRP19P09132 144 aaKnown RBP3.74□□□□□ -1.81
HDAC1-204ENST00000471488 Q8N8P6 123 aa3.74□□□□□ -1.81
HDAC1-204ENST00000471488 SCGB3A1Q96QR1 104 aa3.74□□□□□ -1.81
HDAC1-204ENST00000471488 RPS10P5Q9NQ39 176 aa3.74□□□□□ -1.81
HDAC1-204ENST00000471488 ERG28Q9UKR5 140 aa3.74□□□□□ -1.81
HDAC1-204ENST00000471488 H3BRM9 83 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms